Advanced Molecular Detection Clips Content (Published on 06/13/2024)
NEWS
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African Genomics Sector Grows Alongside Efforts to Keep Talent, Funding, Data on Continent
Ray F. GenomeWeb, May 30, 2024. -
Two-in-one flu and Covid jab passes advanced trial
Roberts M. BBC, un 10, 2024. -
Michigan stands out for its aggressive bird flu response. Will other states follow its lead?
Molteni M. STAT, Jun 12, 2024. -
Two dozen companies working to find bird flu vaccine for cows, US agriculture secretary says
Douglas L. Reuters, Jun 12, 2024. -
Shedding light on the origin of a genetic variant underlying fungal infections
Science Daily, Jun 11, 2024. -
Drug-resistant "dual mutant" flu strains now being tracked in U.S., CDC says
Tin A. CBS News, Jun 12, 2024.
EVENTS / TRAINING / WEB RESOURCES
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Independent Review of New Jersey’s Response to the COVID-19 Pandemic
(report) Montgomery McCracken Walker & Rhoads LLP, March 7, 2024. -
A Long COVID Definition A Chronic, Systemic Disease State with Profound Consequences
(report) NASEM, June 11, 2024.
CONCEPTS / COMMENTS
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Considerations for viral co-infection studies in human populations.
Taylor Chin et al. mBio 2024 6 e0065824 -
Orthopox viruses: is the threat growing?
Erik Boehm et al. Clin Microbiol Infect 2024 2 (7) 883-887 -
Effects of climate change on fungal infections.
Samantha L Williams et al. PLoS Pathog 2024 5 (5) e1012219
METHODS / TOOLS
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binGroup2: Statistical Tools for Infection Identification via Group Testing.
Christopher R Bilder et al. R J 2024 5 (4) 21-36 -
GROND: a quality-checked and publicly available database of full-length 16S-ITS-23S rRNA operon sequences.
Calum J Walsh et al. Microb Genom 2024 6 (6) -
Examining the stability of viral RNA and DNA in wastewater: Effects of storage time, temperature, and freeze-thaw cycles.
Rachel C Williams et al. Water Res 2024 6 121879
EVOLUTION / ECOLOGY / POPULATIONS
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Genomic Surveillance of Invasive Meningococcal Disease During a National MenW Outbreak in Australia, 2017-2018.
Emily Sotheran et al. Open Forum Infect Dis 2024 6 (6) ofae249 -
Genomic surveillance during the first two years of the COVID-19 pandemic - country experience and lessons learned from Türkiye.
Süleyman Yalçin et al. Front Public Health 2024 6 1332109 -
Avian Influenza A(H5N1) Virus among Dairy Cattle, Texas, USA.
Judith U Oguzie et al. Emerg Infect Dis 2024 6 (7) -
Sequence analysis of respiratory syncytial virus cases reveals a novel subgroup -B strain circulating in north-central Italy after pandemic restrictions.
Alessandra Pierangeli et al. J Clin Virol 2024 5 105681 -
Characterization of Enteroviruses circulating among Farm Animals and Children in Central African Republic.
Joël Doté et al. Emerg Microbes Infect 2024 6 2368212 -
Analytic Approaches in Genomic Epidemiological Studies of Parasitic Protozoa
Wang T, et al. Transbound Emerg Dis, Jun 8, 2024. -
Geographic variation in the distribution of Anaplasma phagocytophilum variants in host-seeking Ixodes scapularis nymphs and adults in the eastern United States elucidated using next generation sequencing.
Andrias Hojgaard et al. Ticks Tick Borne Dis 2024 5 (5) 102360 -
Variation in spatial population structure in the Anopheles gambiae species complex.
Robert S McCann et al. bioRxiv 2024 6
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Dissemination of extensively drug-resistant NDM-producing Providencia stuartii in Europe linked to patients transferred from Ukraine, March 2022 to March 2023.
Sandra Witteveen et al. Euro Surveill 2024 6 (23) -
Surveillance of vancomycin-resistant enterococci reveals shift in dominating clusters from vanA to vanB Enterococcus faecium clusters, Denmark, 2015 to 2022.
Anette M Hammerum et al. Euro Surveill 2024 6 (23) -
MmpR5 protein truncation and bedaquiline resistance in Mycobacterium tuberculosis isolates from South Africa: a genomic analysis.
Leah W Roberts et al. Lancet Microbe 2024 6 -
Estimation of SARS-CoV-2 fitness gains from genomic surveillance data without prior lineage classification
Donker T, et al. PNAS, Jun 11, 2024. -
Understanding pathogen emergence through the lens of Candida auris.
Teresa R O'Meara et al. Nat Microbiol 2024 5 (6) 1399-1400 -
Unveiling candidate genes for metabolic resistance to malathion in Aedes albopictus through RNA sequencing-based transcriptome profiling.
Xinyue Huang et al. PLoS Negl Trop Dis 2024 6 (6) e0012243 -
Uncovering the genetic diversity in Aedes aegypti insecticide resistance genes through global comparative genomics.
Anton Spadar et al. Sci Rep 2024 6 (1) 13447
DETECTION / DIAGNOSIS
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Circulating cell-free RNA in blood as a host response biomarker for detection of tuberculosis.
Adrienne Chang et al. Nat Commun 2024 6 (1) 4949 -
Whole Genome Sequencing of Mycobacterium tuberculosis under routine conditions in a high-burden area of multidrug-resistant tuberculosis in Peru.
Zully M Puyén et al. PLoS One 2024 6 (6) e0304130 -
Genomic surveillance of SARS-CoV-2 evolution by a centralised pipeline and weekly focused sequencing, Austria, January 2021 to March 2023.
Olga Frank et al. Euro Surveill 2024 6 (23) -
Rapid genotyping of Toxoplasma gondii isolates via Nanopore-based multi-locus sequencing.
Zisis Koutsogiannis et al. AMB Express 2024 6 (1) 68 -
Target enrichment metaviromics enables comprehensive surveillance of coronaviruses in environmental and animal samples.
Sandra Martínez-Puchol et al. Heliyon 2024 6 (11) e31556 -
Sources and Prevalence of Cyclospora cayetanensis in Southeastern U.S. Growing Environments.
Amy M Kahler et al. J Food Prot 2024 5 (7) 100309
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Outbreak of influenza and SARS-CoV-2 at the Armed Forces of the Philippines Health Service Education and Training Center, September 25-October 10, 2023.
John Mark Velasco et al. MSMR 2024 6 (5) 9-15 -
Mycobacterium immunogenum acquisition from hospital tap water: a genomic and epidemiologic analysis.
Arthur W Baker et al. J Clin Microbiol 2024 5 (6) e0014924 -
SARS-CoV-2 delta variant in African lions (Panthera leo) and humans at Utah's Hogle Zoo, USA, 2021-22.
Heather Oltjen et al. Zoonoses Public Health 2024 6 -
Mathematical modeling of SARS-CoV-2 variant substitutions in European countries: transmission dynamics and epidemiological insights.
Víctor López de Rioja et al. Front Public Health 2024 6 1339267 -
A Metric of Societal Burden Based on Virus Succession to Determine Economic Losses and Health Benefits of China's Lockdown Policies: Model Development and Validation.
Wenxiu Chen et al. JMIR Public Health Surveill 2024 6 e48043 -
Outbreak of Highly Pathogenic Avian Influenza A(H5N1) Viruses in U.S. Dairy Cattle and Detection of Two Human Cases - United States, 2024.
Shikha Garg et al. MMWR Morb Mortal Wkly Rep 2024 5 (21) 501-505 -
Molecular transmission network analysis of newly diagnosed HIV-1 infections in Nanjing from 2019 to 2021.
Hongjie Shi et al. BMC Infect Dis 2024 6 (1) 583 -
Molecular and Epidemiological Investigation of Fluconazole-resistant Candida parapsilosis-Georgia, United States, 2021.
Elizabeth Misas et al. Open Forum Infect Dis 2024 6 (6) ofae264
HOST-MICROBE INTERACTIONS
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Yin and yang of interferons: lessons from the coronavirus disease 2019 (COVID-19) pandemic.
Sara Svensson Akusjärvi et al. Curr Opin Immunol 2024 5 102423
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Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Sep 5, 2024