Advanced Molecular Detection Clips Content (Published on 05/10/2018)
NEWS
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'Find me a sequencer.'
GenomeWeb, May 8, 2018. -
Mass Spec Method Enables ID of 10,000 Proteins in 100-Minute Run
Bonislawski A. GenomeWeb, May 9, 2018. -
European report warns XDR gonorrhea threatens future treatment
Dall C. CIDRAP, May 8, 2018. -
The Oldest Virus Ever Sequenced Comes From a 7,000-Year-Old Tooth
Zhang S. Atlantic, May 9, 2018. -
Zika Blood Screening: Hefty Price Tag for Low Yield
Walker M. MedPage Today, May 9, 2018. -
WHO officials fear latest Ebola outbreak in Congo could spread to big cities
Branswell H. STAT, May 9, 2018. -
Studies of Ancient Hepatitis B Reveal Previously Unknown Lineages in Europe
GenomeWeb, May 10, 2018. -
Scientists Reveals Genes for the Most Deadly Human Malaria Parasite
Holme F. Frontline Genomics, May 4, 2018.
EVENTS / TRAINING / WEB RESOURCES
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May 16 Webinar: Improved Standalone BLAST database and programs: now with taxonomic information
(announcement) NCBI, May 7, 2018.
CONCEPTS / COMMENTS
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On the road to robust data citation
(editorial) Scientific Data, May 8, 2018. -
Protecting confidentiality in genomic studies
MIT, phys.org, May 7, 2018. -
All science should inform policy and regulation.
Ioannidis John P A et al. PLoS medicine 2018 May (5) e1002576 -
As Tests for Foodborne Illness Evolve, Disease-Tracking Systems Must Adapt
(Q&A) Pew Charitable Trust, Apr 30, 2018 -
Turning Up Your Nose for a Flaviviral Encephalitis Cure.
Barouch-Bentov Rina et al. Cell host & microbe 2018 Apr (4) 427-429 -
Revisiting Blood Safety Practices Given Emerging Data about Zika Virus.
Bloch Evan M et al. The New England journal of medicine 2018 May (19) 1837-1841 -
Genetically Engineered Mosquitoes for Pathogen Control.
Benedict Mark Q et al. Vector borne and zoonotic diseases (Larchmont, N.Y.) 2018 01 (1) 1
METHODS / TOOLS
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BoxCar acquisition method enables single-shot proteomics at a depth of 10,000 proteins in 100 minutes.
Meier Florian et al. Nature methods 2018 May -
Robust Sub-nanomolar Library Preparation for High Throughput Next Generation Sequencing.
Wu Wells W et al. BMC genomics 2018 May (1) 326 -
Rescue and Characterization of Recombinant Virus from a New World Zika Virus Infectious Clone.
Weger-Lucarelli James et al. Journal of visualized experiments : JoVE 2017 Jun (124) -
Rapid and sensitive detection of viral nucleic acids using silicon microchips.
Powell Laura et al. The Analyst 2018 May -
EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes.
Clasen Frederick Johannes et al. BMC genomics 2018 May (1) 323 -
De Novo Mutations Resolve Disease Transmission Pathways in Clonal Malaria.
Redmond Seth N et al. Molecular biology and evolution 2018 May
EVOLUTION / ECOLOGY / POPULATIONS
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The evolving epidemic of Clostridium difficile 630.
Roberts Adam P et al. Anaerobe 2018 Apr -
Analysis of rabies diagnosis in dogs and cats in the state of São Paulo, Brazil.
Castilho Juliana Galera et al. Archives of virology 2018 May -
Antigenic and genetic evolution of contemporary swine H1 influenza viruses in the United States.
Rajao Daniela S et al. Virology 2018 05 45-54 -
Transmission of molecularly undetectable circulating parasite clones leads to high infection complexity in mosquitoes post feeding.
Grignard Lynn et al. International journal for parasitology 2018 May
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Invasive Methicillin-Resistant Staphylococcus aureus USA500 Strains from the U.S. Emerging Infections Program Constitute Three Geographically Distinct Lineages.
Frisch M B et al. mSphere 2018 Jun (3) -
Klebsiella pneumoniae as a key trafficker of drug resistance genes from environmental to clinically important bacteria.
Wyres Kelly L et al. Current opinion in microbiology 2018 Apr 131-139 -
Comparative genome analysis and characterization of the Salmonella Typhimurium strain CCRJ_26 isolated from swine carcasses using whole-genome sequencing approach.
Panzenhagen P H N et al. Letters in applied microbiology 2018 Apr (4) 352-359 -
Acquisition of virulence genes by a carrier strain gave rise to the ongoing epidemics of meningococcal disease in West Africa.
Brynildsrud Ola Brønstad et al. Proceedings of the National Academy of Sciences of the United States of America 2018 May -
Group B Streptococcal Colonization, Molecular Characteristics, and Epidemiology.
Shabayek Sarah et al. Frontiers in microbiology 2018 437 -
Global distribution of invasive serotype 35D Streptococcus pneumoniae post-PCV13 introduction.
Lo Stephanie W et al. Journal of clinical microbiology 2018 May -
Comprehensive virome analysis reveals the complexity and diversity of the viral spectrum in pediatric patients diagnosed with severe and mild hand-foot-and-mouth disease.
Wang Chunhua et al. Virology 2018 05 116-125 -
Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya.
Kiyuka Patience K et al. The Journal of infectious diseases 2018 May (11) 1728-1739 -
In-depth comparative analysis of malaria parasite genomes reveals protein-coding genes linked to human disease in Plasmodium falciparum genome.
Liu Xuewu et al. BMC genomics 2018 May (1) 312
DETECTION / DIAGNOSIS
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Rapid Molecular Detection of Gastrointestinal Pathogens and Its Role in Antimicrobial Stewardship.
Keske Siran et al. Journal of clinical microbiology 2018 May (5) -
One Year in the Life of a Rapid Syndromic Panel for Meningitis/Encephalitis: a Pediatric Tertiary Care Facility's Experience.
Naccache Samia N et al. Journal of clinical microbiology 2018 May (5) -
Improved Subtyping of Staphylococcus aureus Clonal Complex 8 Strains Based on Whole-Genome Phylogenetic Analysis.
Bowers Jolene R et al. mSphere 2018 Jun (3) -
The effects of culture independent diagnostic testing on the diagnosis and reporting of enteric bacterial pathogens in Queensland, 2010 to 2014.
May Fiona J et al. Communicable diseases intelligence quarterly report 2017 Sep (3) E223-E230 -
Developing Inclusivity and Exclusivity Panels for Testing Diagnostic and Detection Tools Targeting Burkholderia pseudomallei , the Causative Agent of Melioidosis.
Williamson Charles H D et al. Journal of AOAC International 2018 Apr -
MALDI-TOF MS for identification of Tsukamurella species: Tsukamurella tyrosinosolvens as the predominant species associated with ocular infections.
Teng Jade L L et al. Emerging microbes & infections 2018 May (1) 80 -
Enterovirus and Parechovirus Surveillance United States, 20142016
Abedi GR, et al. MMWR, May 11, 2018. -
Investigational Testing for Zika Virus among U.S. Blood Donors.
Paula Saá et al. N Engl J Med 2018 5 (19) 1778-1788 -
Molecular detection of fungal pathogens in clinical specimens by 18S rDNA high-throughput screening in comparison to ITS PCR and culture.
Wagner K et al. Scientific reports 2018 May (1) 6964 -
Development and evaluation of a novel LAMP assay for the diagnosis of Cutaneous and Visceral Leishmaniasis.
Adams Emily Rebecca et al. Journal of clinical microbiology 2018 Apr -
Multiplicity and molecular epidemiology of Plasmodium vivax and Plasmodium falciparum infections in East Africa.
Zhong Daibin et al. Malaria journal 2018 May (1) 185 -
Rapid identification of medically important mosquitoes by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.
Mewara Abhishek et al. Parasites & vectors 2018 May (1) 281
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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National outbreak of Shiga toxin-producing Escherichia coli O157:H7 linked to mixed salad leaves, United Kingdom, 2016.
Gobin Maya et al. Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2018 May (18) -
An Outbreak of Streptococcus pyogenes in a Mental Health Facility: Advantage of Well-Timed Whole-Genome Sequencing Over emm Typing.
Bergin Sarah M et al. Infection control and hospital epidemiology 2018 May 1-9
ANTIMICROBIALS / VACCINES / INTERVENTIONS
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Impact of Human Immunodeficiency Virus Type 1 Minority Variants on the Virus Response to a Rilpivirine-Based First-line Regimen.
Raymond Stéphanie et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 May (10) 1588-1594
HOST-MICROBE INTERACTIONS
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Compositional and Functional Differences in the Human Gut Microbiome Correlate with Clinical Outcome following Infection with Wild-Type Salmonella enterica Serovar Typhi.
Zhang Yan et al. mBio 2018 May (3) -
Intra-host sequence variability in human papillomavirus.
Dube Mandishora Racheal S et al. Papillomavirus research (Amsterdam, Netherlands) 2018 Apr -
Administrative Data to Explore the Role of Family History as a Risk Factor for Herpes Zoster.
Harpaz Rafael et al. Mayo Clinic proceedings 2018 May -
Influenza-Associated Acute Necrotizing Encephalopathy in Siblings.
Howard Ashley et al. Journal of the Pediatric Infectious Diseases Society 2018 May -
Transcriptomic Studies of Malaria: a Paradigm for Investigation of Systemic Host-Pathogen Interactions.
Lee Hyun Jae et al. Microbiology and molecular biology reviews : MMBR 2018 Jun (2) -
Gut Microbiome Composition Predicts Infection Risk during Chemotherapy in Children with Acute Lymphoblastic Leukemia.
Hakim Hana et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Mar
Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
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