Advanced Molecular Detection Clips Content (Published on 05/30/2024)
NEWS
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U.S. health secretary sees pandemic treaty deal as close
Farge E. Reuters, May 29, 2024. -
COVID Shots Could Use Another Update, Study Suggests
Kahn K. MedPage Today, May 29, 2024. -
Promising preclinical findings for mRNA vaccine against global H5N1 avian flu clade
Schnirring L. CIDRAP, May 23, 2024. -
CDC Prepping for 'Possibility of Increased Risk to Human Health' From Bird Flu
Kahn K. MedPage Today, May 24, 2024. -
Multistate Salmonella outbreak linked to backyard poultry flocks
Dall C. CIDRAP, May 24, 2024.
CONCEPTS / COMMENTS
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US Public Health Preparedness and Response to Highly Pathogenic Avian Influenza A(H5N1) Viruses.
Noah Kojima et al. JAMA 2024 5 -
Applying lessons of COVID-19 and other emerging infectious diseases to future outbreaks.
Evan M Bloch et al. mBio 2024 5 e0110924 -
Climate change, its impact on emerging infectious diseases and new technologies to combat the challenge.
Hongyan Liao et al. Emerg Microbes Infect 2024 5 (1) 2356143
METHODS / TOOLS
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Investing in health preparedness, response and resilience: a genomics costing tool focused on next generation sequencing.
Oluwatosin Wuraola Akande et al. Front Public Health 2024 5 1404243 -
Emerging applications of artificial intelligence in pathogen genomics
Suster CJ, et al. Front. Bacteriol., 06 March 2024 -
Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data.
Steven G Sutcliffe et al. Microb Genom 2024 5 (5) -
A new lineage nomenclature to aid genomic surveillance of dengue virus.
Verity Hill et al. medRxiv 2024 5 -
Meat-Borne-Parasite: A Nanopore-Based Meta-Barcoding Work-Flow for Parasitic Microbiodiversity Assessment in the Wild Fauna of French Guiana.
Adria Matoute et al. Curr Issues Mol Biol 2024 5 (5) 3810-3821
EVOLUTION / ECOLOGY / POPULATIONS
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Molecular surveillance of Helicobacter species with high prevalence from two streams with various wastewater pollution in Taiwan.
Xuan-Di Cao et al. One Health 2024 5 100757 -
Temporal variations in the serogroup distribution of invasive meningococcal disease in Quebec, Canada, due to emerging unique clade of serogroup Y strain belonging to the Sequence Type-23 clonal complex.
Raymond S W Tsang et al. J Infect 2024 4 (6) 106163 -
Comparative genomics reveals high genetic similarity among strains of Salmonella enterica serovar Infantis isolated from multiple sources in Brazil.
Felipe P Vilela et al. PeerJ 2024 5 e17306 -
Epidemiology and genetic diversity of Burkholderia pseudomallei from Riau Province, Indonesia.
Dewi Anggraini et al. PLoS Negl Trop Dis 2024 5 (5) e0012195 -
Persistence of SARS-CoV-2 infection and viral intra- and inter-host evolution in COVID-19 hospitalized patients.
Grazia Pavia et al. J Med Virol 2024 5 (6) e29708 -
Genomic Context of SARS-CoV-2 Outbreaks in Farmed Mink in Spain during Pandemic: Unveiling Host Adaptation Mechanisms.
María Iglesias-Caballero et al. Int J Mol Sci 2024 5 (10) -
Reemergence of a Big Brown Bat Lyssavirus rabies Variant in Striped Skunks in Flagstaff, Arizona, USA, 2021-2023.
Amy T Gilbert et al. Vector Borne Zoonotic Dis 2024 5 -
Exploring Viral Genome Profile in Mpox Patients during the 2022 Outbreak, in a North-Eastern Centre of Italy.
Michela Deiana et al. Viruses 2024 5 (5) -
Influenza Virus Genomic Surveillance, Arizona, USA, 2023-2024.
Rabia Maqsood et al. Viruses 2024 5 (5) -
Introduction of New Dengue Virus Lineages of Multiple Serotypes after COVID-19 Pandemic, Nicaragua, 2022.
Cristhiam Cerpas et al. Emerg Infect Dis 2024 5 (6) 1203-1213 -
Cryptosporidium Genomics - Current Understanding, Advances, and Applications.
Fiifi Agyabeng-Dadzie et al. Curr Trop Med Rep 2024 5 (2) 92-103
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Emergence and ongoing outbreak of ST80 vancomycin-resistant Enterococcus faecium in Guangdong province, China from 2021 to 2023: a multicenter, time-series and genomic epidemiological studyEpidemiology of vancomycin-resistant Enterococcus faecium.
Cong Shen et al. Emerg Microbes Infect 2024 5 2361030 -
Genetic Analyses of Rare ESBL ST628 Klebsiella pneumoniae Detected during a Protracted Nosocomial Outbreak in the United Kingdom.
Stephen Mark Edward Fordham et al. Microorganisms 2024 5 (5)
DETECTION / DIAGNOSIS
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Detection of an emerging pathogen: A real time qualitative pcr assay targeting Haematospirillum jordaniae for EDTA whole blood and plasma clinical specimens.
A M Szewc et al. Diagn Microbiol Infect Dis 2024 5 (4) 116310 -
Targeted next-generation sequencing to diagnose drug-resistant tuberculosis: a systematic review and meta-analysis.
Tiana Carina Schwab et al. Lancet Infect Dis 2024 5 -
A Proof-of-Concept Protein Microarray-Based Approach for Serotyping of Salmonella enterica Strains.
Sascha D Braun et al. Pathogens 2024 5 (5) -
A Diagnostic Chip for the Colorimetric Detection of Legionella pneumophila in Less than 3 h at the Point of Need.
Katerina Tsougeni et al. Biosensors (Basel) 2024 5 (5) -
Development of a sequence-based in silico OspA typing method for Borrelia burgdorferi sensu lato.
Jonathan T Lee et al. Microb Genom 2024 5 (5) -
Long-term wastewater monitoring of SARS-CoV-2 viral loads and variants at the major international passenger hub Amsterdam Schiphol Airport: A valuable addition to COVID-19 surveillance.
Anne-Merel R van der Drift et al. Sci Total Environ 2024 5 173535 -
Retrospective Genotyping of Enteroviruses Using a Diagnostic Nanopore Sequencing Workflow.
Vanessa van Ackeren et al. Pathogens 2024 5 (5) -
Progress Toward Poliomyelitis Eradication - Worldwide, January 2022-December 2023.
Keri Geiger et al. MMWR Morb Mortal Wkly Rep 2024 5 (19) 441-446
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Specific Mycobacterium tuberculosis Strain Circulating in Prison Revealed by Cost-Effective Amplicon Sequencing.
Joaquín Hurtado et al. Microorganisms 2024 5 (5) -
Genomic epidemiology of Streptococcus pyogenes from pharyngeal and skin swabs in Gabon.
Sébastien Boutin et al. Microbiol Spectr 2024 5 e0426523 -
Implications of Ad-Hoc Molecular Typing for Infection Control Measures in a Multi-cluster, Multi-phenotypic Serratia marcescens Outbreak in a Neonatal Intensive Care Unit.
M M A Toorop et al. J Hosp Infect 2024 5 -
U.S. Preparedness and Response to Increasing Clade I Mpox Cases in the Democratic Republic of the Congo - United States, 2024.
Jennifer H McQuiston et al. MMWR Morb Mortal Wkly Rep 2024 5 (19) 435-440
ANTIMICROBIALS / VACCINES / INTERVENTIONS
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Evaluation of two inoculation routes of an adenovirus-mediated viral protein inhibitor in a Crimean-Congo hemorrhagic fever mouse model.
Florine E M Scholte et al. Virus Res 2024 5 199398
HOST-MICROBE INTERACTIONS
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A comprehensive genetic map of cytokine responses in Lyme borreliosis.
Javier Botey-Bataller et al. Nat Commun 2024 5 (1) 3795 -
Genome-wide analyses in Lyme borreliosis: identification of a genetic variant associated with disease susceptibility and its immunological implications.
Hedwig D Vrijmoeth et al. BMC Infect Dis 2024 3 (1) 337 -
Host factors are associated with vaginal microbiome structure in pregnancy in the ECHO Cohort Consortium.
Kimberly McKee et al. Sci Rep 2024 5 (1) 11798
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Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Sep 5, 2024