Advanced Molecular Detection Clips Content (Published on 02/15/2024)
NEWS
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Rise in hypervirulent, carbapenem-resistant Klebsiella noted in Europe
Dall C. CIDRAP, Feb 15, 2024. -
Municipal water linked to Minnesota city's Legionnaire's disease outbreak
Schnirring L. CIDRAP, Feb 13, 2024. -
Possibility of Animal-to-Human Jump Heightens Concern About Chronic Wasting Disease
Robbins J. KFF Health News, Feb 11, 2024. -
H.I.V. Groups Warn of Privacy Risks in How C.D.C. Tracks Virus Samples
Ryan B. New York Times, Feb 9, 2024.
EVENTS / TRAINING / WEB RESOURCES
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Practical considerations for genomic epidemiology in public health
(blog post) Allen K. Applied and Genomic Epidemiology in Public Health, Feb 10, 2024. -
A training program for improving the capacity of infection high-throughput sequencing and diagnosis in China.
Dong Zhang et al. BMC Med Educ 2024 2 (1) 142
CONCEPTS / COMMENTS
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The story of the R number: How an obscure epidemiological figure took over our lives. Part 1: History
Freeguard G. Significance, Feb 1, 2024.
METHODS / TOOLS
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Robust expansion of phylogeny for fast-growing genome sequence data.
Yongtao Ye et al. PLoS Comput Biol 2024 2 (2) e1011871
EVOLUTION / ECOLOGY / POPULATIONS
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Molecular epidemiological characteristics of Mycobacterium leprae in highly endemic areas of China during the COVID-19 epidemic.
Jiaojiao Zhou et al. Front Public Health 2024 2 1148705 -
Persistent SARS-CoV-2 infection: significance and implications.
Heather M Machkovech et al. Lancet Infect Dis 2024 2 -
Investigating the rise of Omicron variant through genomic surveillance of SARS-CoV-2 infections in a highly vaccinated university population.
Ilinca I Ciubotariu et al. Microb Genom 2024 2 (2) -
Evolutionary History and Genetic Variation of Zika Virus: Connection Between Thailand Zika Viruses and Global Outbreaks Strains.
Amina Nawal Bahoussi et al. Vector Borne Zoonotic Dis 2023 10 (2) 122-128 -
Genetic diversity of G9, G3, G8 and G1 rotavirus group A strains circulating among children with acute gastroenteritis in Vietnam from 2016 to 2021.
Ly K T Le et al. Infect Genet Evol 2024 2 105566
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Hormonal steroids induce multidrug resistance and stress response genes in Neisseria gonorrhoeae by binding to MtrR.
Grace M Hooks et al. Nat Commun 2024 2 (1) 1153 -
A 6-year retrospective study of clinical features, microbiology, and genomics of Shiga toxin-producing Escherichia coli in children who presented to a tertiary referral hospital in Costa Rica.
Cristian Perez-Corrales et al. Microbiol Spectr 2024 2 e0305623 -
Anthropogenic contamination sources drive differences in antimicrobial-resistant Escherichia coli in three urban lakes.
Jordan Wight et al. Appl Environ Microbiol 2024 2 e0180923 -
Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales.
Rhys T White et al. Nat Commun 2024 2 (1) 1371 -
Mortality associated with SARS-CoV-2 in nondomestic felids.
Mary Drozd et al. Vet Pathol 2024 2 3009858231225500
DETECTION / DIAGNOSIS
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Detection of Salmonella Typhi bacteriophages in surface waters as a scalable approach to environmental surveillance.
Sneha Shrestha et al. PLoS Negl Trop Dis 2024 2 (2) e0011912 -
Genomic surveillance of extended-spectrum cephalosporin-resistant Escherichia coli isolated from poultry in the UK from 2016 to 2020.
Nicholas Duggett et al. Front Microbiol 2024 2 1335173 -
Real-time evaluation of signal accuracy in wastewater surveillance of pathogens with high rates of mutation.
Ocean Thakali et al. Sci Rep 2024 2 (1) 3728 -
Development and validation of a quick, automated, and reproducible ATR FT-IR spectroscopy machine-learning model for Klebsiella pneumoniae typing.
Ângela Novais et al. J Clin Microbiol 2024 1 (2) e0121123 -
Detection of resistance to macrolides and fluoroquinolones in Mycoplasma genitalium by targeted next-generation sequencing.
Calin B Chiribau et al. Microbiol Spectr 2024 2 e0384523 -
Metagenomic next-generation sequencing of plasma cell-free DNA improves the early diagnosis of suspected infections.
Hui Zhang et al. BMC Infect Dis 2024 2 (1) 187 -
Identification of SARS-CoV-2 variants in indoor dust.
John Van Dusen et al. PLoS One 2024 2 (2) e0297172 -
Identification of Large Adenovirus Infection Outbreak at University by Multipathogen Testing, South Carolina, USA, 2022.
Marco E Tori et al. Emerg Infect Dis 2024 1 (2) 358-362
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Extensively Drug-Resistant Pseudomonas aeruginosa Outbreak associated with Artificial Tears.
Marissa K Grossman et al. Clin Infect Dis 2024 2 -
Salmonella Vitkin Outbreak Associated with Bearded Dragons, Canada and United States, 2020-2022.
Katherine Paphitis et al. Emerg Infect Dis 2024 1 (2) 225-233 -
Genomic investigation of multispecies and multivariant bla outbreak reveals key role of horizontal plasmid transmission.
Nenad Macesic et al. Infect Control Hosp Epidemiol 2024 2 1-8 -
Whole-Genome sequencing in routine Mycobacterium bovis epidemiology - scoping the potential.
Adrian Allen et al. Microb Genom 2024 2 (2) -
Staphylococcus epidermidis joint isolates: Whole-genome sequencing demonstrates evidence of hospital transmission and common antimicrobial resistance.
Samantha J Simon et al. Infect Control Hosp Epidemiol 2023 12 (2) 150-156 -
On the onset and dispersal of a major MDR TB clone among HIV-negative patients, Tunisia.
Naira Dekhil et al. Antimicrob Resist Infect Control 2024 2 (1) 18 -
Updating Reproduction Number Estimates for Mpox in the Democratic Republic of Congo Using Surveillance Data.
Kelly Charniga et al. Am J Trop Med Hyg 2024 2 -
Plasmodium falciparum transmission in the highlands of Ethiopia is driven by closely related and clonal parasites.
Aurel Holzschuh et al. Mol Ecol 2024 2 e17292
ANTIMICROBIALS / VACCINES / INTERVENTIONS
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Utilizing a university testing program to estimate relative effectiveness of monovalent COVID-19 mRNA booster vaccine versus two-dose primary series against symptomatic SARS-CoV-2 infection.
Julia C Bennett et al. Vaccine 2024 2 -
Effectiveness of Bivalent mRNA COVID-19 Vaccines in Preventing SARS-CoV-2 Infection in Children and Adolescents Aged 5 to 17 Years.
Leora R Feldstein et al. JAMA 2024 2 (5) 408-416 -
Early Estimates of Updated 2023-2024 (Monovalent XBB.1.5) COVID-19 Vaccine Effectiveness Against Symptomatic SARS-CoV-2 Infection Attributable to Co-Circulating Omicron Variants Among Immunocompetent Adults - Increasing Community Access to Testing Program, United States, September 2023-January 2024.
Ruth Link-Gelles et al. MMWR Morb Mortal Wkly Rep 2024 2 (4) 77-83 -
Risk of carditis among adolescents after extending the interdose intervals of BNT162b2.
Min Fan et al. NPJ Vaccines 2024 2 (1) 31
HOST-MICROBE INTERACTIONS
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Global Transcriptomic Analysis of Placentas from Women with Gestational SARS-CoV-2 Infection during the Third Trimester of Pregnancy.
Yiqun Tang et al. Int J Mol Sci 2024 2 (3) -
Investigating the shared genetic architecture between COVID-19 and obesity: a large-scale genome wide cross-trait analysis.
Yanjing Chen et al. Front Endocrinol (Lausanne) 2024 2 1325939
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Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Sep 5, 2024