Advanced Molecular Detection Clips Content (Published on 01/18/2024)
NEWS
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Wisconsin bill to restrict pathogen studies worries scientists
Kaiser J. Science, Jan 12, 2024. -
US had COVID sequence in 2019, raising questions about who knew what when
Weintraub K. USA Today, Jan 17, 2024. -
Study: Infection-control measures stemmed COVID spread in hospitals from 2020 to 2022
Van Beusekom M. CIDRAP, Jan 17, 2024. -
An unprecedented flu strain is attacking hundreds of animal species. Humans could be next.
Grandoni D. Washington Post, Jan 15, 2024. -
Chimpanzees are dying from our colds — these scientists are trying to save them
Nuwer R. Nature, Jan 16, 2024. -
Did the Black Death shape the human genome? Study challenges bold claim
Callaway E. Nature, Jan 17, 2024.
EVENTS / TRAINING / WEB RESOURCES
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Bridging gaps in traditional research training with iBiology Courses.
Alexandra M Schnoes et al. PLoS Biol 2024 1 (1) e3002458
CONCEPTS / COMMENTS
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The American Academy of Microbiology discusses gain-of-function research of concern (GOFROC) and enhanced potential pandemic pathogens (ePPP).
Arturo Casadevall et al. mBio 2023 12 (1) e0276123 -
"Smart markets": harnessing the potential of new technologies for endemic and emerging infectious disease surveillance in traditional food markets.
Benjamin L Sievers et al. J Virol 2024 1 e0168323
METHODS / TOOLS
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MAGICIAN: MAG simulation for investigating criteria for bioinformatic analysis.
Kat Steinke et al. BMC Genomics 2024 1 (1) 55 -
The ongoing evolution of UShER during the SARS-CoV-2 pandemic.
Angie Hinrichs et al. Nat Genet 2023 12 (1) 4-7 -
High-performance enrichment-based genome sequencing to support the investigation of hepatitis A virus outbreaks.
Sara E Zufan et al. Microbiol Spectr 2023 11 (1) e0283423 -
A human-curated annotation of the Candida albicans genome.
Burkhard R Braun et al. PLoS Genet 2005 8 (1) 36-57
EVOLUTION / ECOLOGY / POPULATIONS
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Within-host genomic evolution of methicillin-resistant Staphylococcus aureus in long-term carriers.
Tine Graakjær Larsen et al. Appl Microbiol Biotechnol 2024 1 (1) 1-9 -
Evolution and Spread of Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4b Virus in Wild Birds, South Korea, 2022-2023.
Ye-Ram Seo et al. Emerg Infect Dis 2024 1 (2) -
Population genomic analyses reveal high diversity, recombination and nosocomial transmission among Candida glabrata (Nakaseomyces glabrata) isolates causing invasive infections.
Yue Wang et al. Microb Genom 2024 1 (1)
PATHOGENICITY / ANTIMICROBIAL RESISTANCE
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Antibiotic resistance determination using Enterococcus faecium whole-genome sequences: a diagnostic accuracy study using genotypic and phenotypic data.
Francesc Coll et al. Lancet Microbe 2024 1 -
Modulation of multidrug-resistant clone success in Escherichia coli populations: a longitudinal, multi-country, genomic and antibiotic usage cohort study.
Anna K Pöntinen et al. Lancet Microbe 2024 1 -
Global emergence of a hypervirulent carbapenem-resistant Escherichia coli ST410 clone.
Xiaoliang Ba et al. Nat Commun 2024 1 (1) 494 -
High prevalence of heteroresistance in Staphylococcus aureus is caused by a multitude of mutations in core genes.
Sheida Heidarian et al. PLoS Biol 2024 1 (1) e3002457 -
Genetic features of antimicrobial drug-susceptible extraintestinal pathogenic Escherichia coli pandemic sequence type 95.
Yuan Hu Allegretti et al. Microbiol Spectr 2023 12 (1) e0418922 -
Descriptive analysis of targeted carbapenemase genes and antibiotic susceptibility profiles among carbapenem-resistant Acinetobacter baumannii tested in the Antimicrobial Resistance Laboratory Network-United States, 2017-2020.
Sarah Sabour et al. Microbiol Spectr 2024 1 e0282823 -
Clinical, Genomic, and Immunological Characterization of RSV Surge in Sydney, Australia, 2022.
Gregory J Walker et al. Pediatrics 2024 1
DETECTION / DIAGNOSIS
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Opportunities and limitations of genomics for diagnosing bedaquiline-resistant tuberculosis: a systematic review and individual isolate meta-analysis.
Camus Nimmo et al. Lancet Microbe 2024 1 -
Mining genomic repositories to further our knowledge of the extent of SARS-CoV-2 co-infections.
Daniel Peñas-Utrilla et al. Microb Genom 2024 1 (1) -
Chronic shedding of a SARS-CoV-2 Alpha variant in wastewater.
Michael J Conway et al. BMC Genomics 2024 1 (1) 59 -
Comparative analysis of COVID-19 and influenza prevalence among Egyptian pilgrims returning from Hajj and Umrah in 2022: epidemiology, clinical characteristics, and genomic sequencing.
Amr Kandeel et al. Arch Public Health 2024 1 (1) 6 -
In-field detection and characterization of B/Victoria lineage deletion variant viruses causing early influenza activity and an outbreak in Louisiana, 2019.
Bo Shu et al. Influenza Other Respir Viruses 2024 1 (1) e13246 -
Portable Nanopore sequencing solution for next-generation HIV drug resistance testing.
Sung Yong Park et al. J Clin Virol 2024 1 105639 -
Candida auris detected in the oral cavity of a dog in Kansas.
Theodore C White et al. mBio 2024 1 e0308023
EPIDEMIOLOGY / OUTBREAKS / TRANSMISSION
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Human Disease due to Mycobacterium bovis Linked to Free-Ranging Deer in Michigan.
James Sunstrum et al. Clin Infect Dis 2024 1 -
Molecular characterization of an outbreak-involved Bacillus anthracis strain confirms the spillover of anthrax from West Africa.
Shuchao Wang et al. Infect Dis Poverty 2024 1 (1) 6 -
Integrated Genomic and Social Network Analyses of Severe Acute Respiratory Syndrome Coronavirus 2 Transmission in the Healthcare Setting.
Jocelyn Keehner et al. Clin Infect Dis 2024 1 -
Changing genomic epidemiology of COVID-19 in long-term care facilities during the 2020-2022 pandemic, Washington State.
Hanna N Oltean et al. BMC Public Health 2024 1 (1) 182
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Disclaimer: Articles listed in the Advanced Molecular Detection Clips are selected by Public Health Genomics Branch to provide current awareness of the scientific literature and news. Inclusion in the clips does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.
- Page last reviewed:Feb 1, 2024
- Page last updated:Sep 5, 2024