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Genomics & Health Impact Scan Database|Search|PHGKB

Last data update: Mar 31, 2023. (Total: 59026 Documents since 2012)
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Query Trace:
A systematic review of economic evaluations of whole-genome sequencing for the surveillance of bacterial pathogens.
Vivien Price et al. Microbial genomics 2023 9(2)
Wastewater-based Disease Surveillance for Public Health Action
National Academies Consensus Report, January 2023
The case for including microbial sequences in the electronic health record.
Sintchenko Vitali et al. Nature medicine 2023
CDC announces $90M funding to support new Pathogen Genomics Centers of Excellence network
CDC, September 20, 2022
Ethical Challenges Associated with Pathogen and Host Genetics in Infectious Disease.
Milne Richard et al. The New bioethics : a multidisciplinary journal of biotechnology and the body 2022 1-13
Success Stories
CDC, 2022
Global genomic surveillance strategy for pathogens with pandemic and epidemic potential, 2022–2032
WHO, March 2022
Impact of technological developments on infectious disease epidemiology: Lessons from the first 100 years of AJE.
Foxman Betsy et al. American journal of epidemiology 2022
Using Genomic Epidemiology to Advance Public Health Action
CDC Preventive Medicine Grand Rounds, February 22, 2022
Empowering Equitable Data Use Partnerships and Indigenous Data Sovereignties Amid Pandemic Genomics.
Haring Rodney C et al. Frontiers in public health 2021 9742467
Emerging technologies and infection models in cellular microbiology
AT Lopez-Jimenez et al, Nat Comms, Novemeber 22, 2021
Patient-focused pathogen genetic counselling-has the time come?
Ferdinand Angeline S et al. Genome medicine 2021 13(1) 178
Host genomics and infectious disease
H Turner, PHG Foundation, September 2021
An implementation science approach to evaluating pathogen whole genome sequencing in public health
AS Ferdinand et al, Genome Medicine, July 29, 2021
The importance of molecular diagnostics for infectious diseases in low-resource settings.
Okeke Iruka N et al. Nature reviews. Microbiology 2021
Global genomic pathogen surveillance to inform vaccine strategies: a decade-long expedition in pneumococcal genomics
SD Bentley et al, Genome Medicine, May 17, 2021
Host genetic susceptibility to viral infections: the role of type I interferon induction
M Bourdon et al, Genes and Immunity, November 20, 2020
Using genomics to improve preparedness and response of future epidemics or pandemics in Africa
C Chaguza et al, Lancet Microbe, November 2020
Pathogen genomics initiative to boost disease control in Africa
CB De Villiers, PHG Foundation, October 21, 2020
Whole Genome Sequencing (WGS) versus the gonococcus: How CDC scientists are using WGS to beat antibiotic resistant gonorrhea
E Woodson et al, CDC Blog Post, September 14, 2020
Microbe tests in the NIH Genetic Testing Registry
NIH Genetic Testing Registry, September 2020
Perceived utility and feasibility of pathogen genomics for public health practice: a survey among public health professionals working in the field of infectious diseases, Belgium, 2019.
Van Goethem N et al. BMC public health 2020 Aug 20(1) 1318
NIH Genetic Testing Registry (GTR) now accepting microbe tests including SARS-CoV-2 / COVID-19 tests
NCBI, September 2020
Editorial: Pathogen Genomics: Empowering Infectious Disease Surveillance and Outbreak Investigations
MJ Struenlens et al, Front Public Health, May 19, 2020
AI finds microbial signatures in tumours and blood across cancer types
NJ Ajami et al, Nature News, March 11, 2020
Beyond the Data Podcast, CDC Public Health Grand Rounds
CDC, January 2020
Pathogen Genomics in Public Health.
Armstrong Gregory L et al. The New England journal of medicine 2019 381(26) 2569-2580
Ten Recommendations for Supporting Open Pathogen Genomic Analysis in Public Health Settings
A Black et al, preprints, January 2020
First death from Wuhan pneumonia outbreak reported as scientists release DNA sequence of virus
A Joseph, StatNews, January 11, 2020
Mashtree: a rapid comparison of whole genome sequence files
LS Katz et al, JOSSS, December 2019
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