HuGE Literature Finder
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Records 1-36
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Targeted sequencing of a specific gene panel detects a high frequency of ARID1A and PIK3CA mutations in ovarian clear cell carcinoma.
Clinica chimica acta; international journal of clinical chemistry 2019 Mar 494 1-7. Su Yu-Fa, Tsai Eing-Mei, Chen Chih-Chieh, Wu Chun-Chieh, Er Tze-Kio |
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Rates of TP53 Mutation are Significantly Elevated in African American Patients with Gastric Cancer.
Annals of surgical oncology 2018 Jul 25 (7): 2027-2033. van Beek Elke J A H, Hernandez Jonathan M, Goldman Debra A, Davis Jeremy L, McLaughlin Kaitlin, Ripley R Taylor, Kim Teresa S, Tang Laura H, Hechtman Jaclyn F, Zheng Jian, Capanu Marinela, Schultz Nikolaus, Hyman David M, Ladanyi Marc, Berger Michael F, Solit David B, Janjigian Yelena Y, Strong Vivian |
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Genomic alterations of plasma cell-free DNAs in small cell lung cancer and their clinical relevance.
Lung cancer (Amsterdam, Netherlands) 2018 Jun 120 113-121. Du Meijun, Thompson Jonathan, Fisher Hannah, Zhang Peng, Huang Chiang-Ching, Wang Lia |
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Genomic landscape of ovarian clear cell carcinoma via whole exome sequencing.
Gynecologic oncology 2018 02 148 (2): 375-382. Kim Se Ik, Lee Ji Won, Lee Maria, Kim Hee Seung, Chung Hyun Hoon, Kim Jae-Weon, Park Noh Hyun, Song Yong-Sang, Seo Jeong-S |
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HPV Status and Mutation Analysis Using Multiparallel Sequencing in Distal Oesophageal and Gastro-oesophageal Junction Adenocarcinomas.
Folia biologica 2018 64 (2): 41-45. Vošmik M, Vošmiková H, Sieglová K, Sirák I, Laco J, Ryška A, Petera J, Melichar B, Soumarová |
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Identification of somatic genetic alterations in ovarian clear cell carcinoma with next generation sequencing.
Genes, chromosomes & cancer 2018 02 57 (2): 51-60. Shibuya Yusuke, Tokunaga Hideki, Saito Sakae, Shimokawa Kazurou, Katsuoka Fumiki, Bin Li, Kojima Kaname, Nagasaki Masao, Yamamoto Masayuki, Yaegashi Nobuo, Yasuda J |
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Somatic mutation profiles of clear cell endometrial tumors revealed by whole exome and targeted gene sequencing.
Cancer 2017 Sep 123 (17): 3261-3268. Le Gallo Matthieu, Rudd Meghan L, Urick Mary Ellen, Hansen Nancy F, Zhang Suiyuan, , Lozy Fred, Sgroi Dennis C, Vidal Bel August, Matias-Guiu Xavier, Broaddus Russell R, Lu Karen H, Levine Douglas A, Mutch David G, Goodfellow Paul J, Salvesen Helga B, Mullikin James C, Bell Daphne |
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Mutational heterogeneity in non-serous ovarian cancers.
Scientific reports 2017 Aug 7 (1): 9728. Teer Jamie K, Yoder Sean, Gjyshi Anxhela, Nicosia Santo V, Zhang Chaomei, Monteiro Alvaro N |
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Prognostic and Clinicopathological significance of ARID1A in endometrium-related gynecological cancers: A meta-analysis.
Journal of cellular biochemistry 2017 May . Liu Guangquan, Xu Pengfei, Fu Ziyi, Hua Xiangdong, Liu Xiaoguang, Li Wenqu, Zhang Mi, Wu Jiacong, Wen Juan, Xu Juan, Jia Xuem |
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Possible Risk Factors of Pulmonary Metastases in Patients With International Federation of Gynecology and Obstetrics Stage I Endometrioid-Type Endometrial Cancer.
International journal of gynecological cancer : official journal of the International Gynecological Cancer Society 2017 07 27 (6): 1206-1215. Jiang Wei, Chen Jun, Tao Xiang, Huang Feifei, Zhu Menghan, Wang Chao, Feng Weiw |
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CCNE1 copy-number gain and overexpression identify ovarian clear cell carcinoma with a poor prognosis.
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2016 Oct . Ayhan Ayse, Kuhn Elisabetta, Wu Ren-Chin, Ogawa Hiroshi, Bahadirli-Talbott Asli, Mao Tsui-Lien, Sugimura Haruhiko, Shih Ie-Ming, Wang Tian- |
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Effect of ARID1A/BAF250a expression on carcinogenesis and clinicopathological factors in pure-type clear cell adenocarcinoma of the ovary.
Molecular and clinical oncology 2016 Oct 5 (4): 395-401. Kato Masafumi, Takano Masashi, Miyamoto Morikazu, Sasaki Naoki, Goto Tomoko, Suzuki Ayako, Hirata Junko, Sasa Hidenori, Tsuda Hitoshi, Furuya Kenic |
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Biliary cancer: Utility of next-generation sequencing for clinical management.
Cancer 2016 Sep . Javle Milind, Bekaii-Saab Tanios, Jain Apurva, Wang Ying, Kelley Robin Katie, Wang Kai, Kang Hyunseon C, Catenacci Daniel, Ali Siraj, Krishnan Sunil, Ahn Daniel, Bocobo Andrea Grace, Zuo Mingxin, Kaseb Ahmed, Miller Vincent, Stephens Philip J, Meric-Bernstam Funda, Shroff Rachna, Ross Jeffr |
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Phase II Trial and Correlative Genomic Analysis of Everolimus Plus Bevacizumab in Advanced Non-Clear Cell Renal Cell Carcinoma.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2016 Sep . Voss Martin H, Molina Ana M, Chen Ying-Bei, Woo Kaitlin M, Chaim Joshua L, Coskey Devyn T, Redzematovic Almedina, Wang Patricia, Lee William, Selcuklu S Duygu, Lee Chung-Han, Berger Michael F, Tickoo Satish K, Reuter Victor E, Patil Sujata, Hsieh James J, Motzer Robert J, Feldman Darren |
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Comprehensive mutation profiling of mucinous gastric carcinoma.
The Journal of pathology 2016 Jun . Rokutan Hirofumi, Hosoda Fumie, Hama Natsuko, Nakamura Hiromi, Totoki Yasushi, Furukawa Eisaku, Arakawa Erika, Ohashi Shoko, Urushidate Tomoko, Satoh Hironori, Shimizu Hiroko, Igarashi Keiko, Yachida Shinichi, Katai Hitoshi, Taniguchi Hirokazu, Fukayama Masashi, Shibata Tatsuhi |
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Loss of ARID1A Expression Presents a Novel Pathway of Carcinogenesis in Biliary Carcinomas.
American journal of clinical pathology 2016 Jun 145 (6): 815-25. Sasaki Motoko, Nitta Takeo, Sato Yasunori, Nakanuma Yasu |
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Medullary carcinoma in the colorectum: a systematic review and meta-analysis.
Human pathology 2016 Mar . Pyo Jung-Soo, Sohn Jin Hee, Kang Guhy |
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Whole-exome sequencing of duodenal adenocarcinoma identifies recurrent Wnt/?-catenin signaling pathway mutations.
Cancer 2016 Mar . Yuan Wei, Zhang Zhou, Dai Binghua, Wei Qing, Liu Jinjin, Liu Yuzhen, Liu Yun, He Lin, Zhou Daizh |
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Genomic characterization of sarcomatoid transformation in clear cell renal cell carcinoma.
Proceedings of the National Academy of Sciences of the United States of America 2016 Feb . Bi Mark, Zhao Siming, Said Jonathan W, Merino Maria J, Adeniran Adebowale J, Xie Zuoquan, Nawaf Cayce B, Choi Jaehyuk, Belldegrun Arie S, Pantuck Allan J, Kluger Harriet M, Bilgüvar Kaya, Lifton Richard P, Shuch Bri |
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Targeted next-generation sequencing for molecular diagnosis of endometriosis-associated ovarian cancer.
Journal of molecular medicine (Berlin, Germany) 2016 Feb . Er Tze-Kiong, Su Yu-Fa, Wu Chun-Chieh, Chen Chih-Chieh, Wang Jing, Hsieh Tsung-Hua, Herreros-Villanueva Marta, Chen Wan-Tzu, Chen Yi-Ting, Liu Ta-Chih, Chen Hung-Sheng, Tsai Eing-M |
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Cholangiocarcinoma Heterogeneity Revealed by Multigene Mutational Profiling: Clinical and Prognostic Relevance in Surgically Resected Patients.
Annals of surgical oncology 2015 Dec . Ruzzenente Andrea, Fassan Matteo, Conci Simone, Simbolo Michele, Lawlor Rita T, Pedrazzani Corrado, Capelli Paola, D'Onofrio Mirko, Iacono Calogero, Scarpa Aldo, Guglielmi Alfre |
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Targeted genomic profiling reveals recurrent KRAS mutations and gain of chromosome 1q in mesonephric carcinomas of the female genital tract.
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2015 Sep . Mirkovic Jelena, Sholl Lynette M, Garcia Elizabeth, Lindeman Neal, MacConaill Laura, Hirsch Michelle, Dal Cin Paola, Gorman Melissa, Barletta Justine A, Nucci Marisa R, McCluggage W Glenn, Howitt Brooke |
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Mutational landscape of gastric adenocarcinoma in Chinese: implications for prognosis and therapy.
Proceedings of the National Academy of Sciences of the United States of America 2015 Jan 112 (4): 1107-12. Chen Kexin, Yang Da, Li Xiangchun, Sun Baocun, Song Fengju, Cao Wenfeng, Brat Daniel J, Gao Zhibo, Li Haixin, Liang Han, Zhao Yanrui, Zheng Hong, Li Miao, Buckner Jan, Patterson Scott D, Ye Xiang, Reinhard Christoph, Bhathena Anahita, Joshi Deepa, Mischel Paul S, Croce Carlo M, Wang Yi Michael, Raghavakaimal Sreekumar, Li Hui, Lu Xin, Pan Yang, Chang Han, Ba Sujuan, Luo Longhai, Cavenee Webster K, Zhang Wei, Hao Xish |
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Integrated copy number and expression analysis identifies profiles of whole-arm chromosomal alterations and subgroups with favorable outcome in ovarian clear cell carcinomas.
PloS one 2015 10 (6): e0128066. Uehara Yuriko, Oda Katsutoshi, Ikeda Yuji, Koso Takahiro, Tsuji Shingo, Yamamoto Shogo, Asada Kayo, Sone Kenbun, Kurikawa Reiko, Makii Chinami, Hagiwara Otoe, Tanikawa Michihiro, Maeda Daichi, Hasegawa Kosei, Nakagawa Shunsuke, Wada-Hiraike Osamu, Kawana Kei, Fukayama Masashi, Fujiwara Keiichi, Yano Tetsu, Osuga Yutaka, Fujii Tomoyuki, Aburatani Hiroyu |
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Exome sequencing reveals frequent inactivating mutations in ARID1A, ARID1B, ARID2 and ARID4A in microsatellite unstable colorectal cancer.
International journal of cancer. Journal international du cancer 2014 Aug 135 (3): 611-23. Cajuso Tatiana, Hänninen Ulrika A, Kondelin Johanna, Gylfe Alexandra E, Tanskanen Tomas, Katainen Riku, Pitkänen Esa, Ristolainen Heikki, Kaasinen Eevi, Taipale Minna, Taipale Jussi, Böhm Jan, Renkonen-Sinisalo Laura, Mecklin Jukka-Pekka, Järvinen Heikki, Tuupanen Sari, Kilpivaara Outi, Vahteristo P |
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Multigene mutational profiling of cholangiocarcinomas identifies actionable molecular subgroups.
Oncotarget 2014 May 5 (9): 2839-52. Simbolo Michele, Fassan Matteo, Ruzzenente Andrea, Mafficini Andrea, Wood Laura D, Corbo Vincenzo, Melisi Davide, Malleo Giuseppe, Vicentini Caterina, Malpeli Giorgio, Antonello Davide, Sperandio Nicola, Capelli Paola, Tomezzoli Anna, Iacono Calogero, Lawlor Rita T, Bassi Claudio, Hruban Ralph H, Guglielmi Alfredo, Tortora Giampaolo, de Braud Filippo, Scarpa Al |
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Whole-exome sequencing of pancreatic neoplasms with acinar differentiation.
The Journal of pathology 2014 Mar 232 (4): 428-35. Jiao Yuchen, Yonescu Raluca, Offerhaus G Johan A, Klimstra David S, Maitra Anirban, Eshleman James R, Herman James G, Poh Weijie, Pelosof Lorraine, Wolfgang Christopher L, Vogelstein Bert, Kinzler Kenneth W, Hruban Ralph H, Papadopoulos Nickolas, Wood Laura |
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Comprehensive genomic profiling of relapsed and metastatic adenoid cystic carcinomas by next-generation sequencing reveals potential new routes to targeted therapies.
The American journal of surgical pathology 2014 Feb 38 (2): 235-8. Ross Jeffrey S, Wang Kai, Rand Janna V, Sheehan Christine E, Jennings Timothy A, Al-Rohil Rami N, Otto Geoff A, Curran John C, Palmer Gary, Downing Sean R, Yelensky Roman, Lipson Doron, Balasubramanian Sohail, Garcia Lazaro, Mahoney Kristen, Ali Siraj M, Miller Vincent A, Stephens Philip |
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Ovarian and endometrial endometrioid carcinomas have distinct CTNNB1 and PTEN mutation profiles.
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2014 Jan 27 (1): 128-34. McConechy Melissa K, Ding Jiarui, Senz Janine, Yang Winnie, Melnyk Nataliya, Tone Alicia A, Prentice Leah M, Wiegand Kimberly C, McAlpine Jessica N, Shah Sohrab P, Lee Cheng-Han, Goodfellow Paul J, Gilks C Blake, Huntsman David |
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Mutation profiling in cholangiocarcinoma: prognostic and therapeutic implications.
PloS one 2014 9 (12): e115383. Churi Chaitanya R, Shroff Rachna, Wang Ying, Rashid Asif, Kang HyunSeon C, Weatherly Jacqueline, Zuo Mingxin, Zinner Ralph, Hong David, Meric-Bernstam Funda, Janku Filip, Crane Christopher H, Mishra Lopa, Vauthey Jean-Nicholas, Wolff Robert A, Mills Gordon, Javle Mili |
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Exome sequencing identifies distinct mutational patterns in liver fluke-related and non-infection-related bile duct cancers.
Nature genetics 2013 Dec 45 (12): 1474-8. Chan-On Waraporn, Nairismägi Maarja-Liisa, Ong Choon Kiat, Lim Weng Khong, Dima Simona, Pairojkul Chawalit, Lim Kiat Hon, McPherson John R, Cutcutache Ioana, Heng Hong Lee, Ooi London, Chung Alexander, Chow Pierce, Cheow Peng Chung, Lee Ser Yee, Choo Su Pin, Tan Iain Bee Huat, Duda Dan, Nastase Anca, Myint Swe Swe, Wong Bernice Huimin, Gan Anna, Rajasegaran Vikneswari, Ng Cedric Chuan Young, Nagarajan Sanjanaa, Jusakul Apinya, Zhang Shenli, Vohra Priya, Yu Willie, Huang DaChuan, Sithithaworn Paiboon, Yongvanit Puangrat, Wongkham Sopit, Khuntikeo Narong, Bhudhisawasdi Vajaraphongsa, Popescu Irinel, Rozen Steven G, Tan Patrick, Teh Bin Te |
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Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity.
Nature genetics 2013 May 45 (5): 478-86. Dulak Austin M, Stojanov Petar, Peng Shouyong, Lawrence Michael S, Fox Cameron, Stewart Chip, Bandla Santhoshi, Imamura Yu, Schumacher Steven E, Shefler Erica, McKenna Aaron, Carter Scott L, Cibulskis Kristian, Sivachenko Andrey, Saksena Gordon, Voet Douglas, Ramos Alex H, Auclair Daniel, Thompson Kristin, Sougnez Carrie, Onofrio Robert C, Guiducci Candace, Beroukhim Rameen, Zhou Zhongren, Lin Lin, Lin Jules, Reddy Rishindra, Chang Andrew, Landrenau Rodney, Pennathur Arjun, Ogino Shuji, Luketich James D, Golub Todd R, Gabriel Stacey B, Lander Eric S, Beer David G, Godfrey Tony E, Getz Gad, Bass Adam |
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Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes.
Nature 2012 Oct . Biankin AV, Waddell N, Kassahn KS, Gingras MC, Muthuswamy LB, Johns AL, Miller DK, Wilson PJ, Patch AM, Wu J, Chang DK, Cowley MJ, Gardiner BB, Song S, Harliwong I, Idrisoglu S, Nourse C, Nourbakhsh E, Manning S, Wani S, Gongora M, Pajic M, Scarlett CJ, Gill AJ, Pinho AV, Rooman I, Anderson M, Holmes O, Leonard C, Taylor D, Wood S, Xu C, Nones K, Lynn Fink J, Christ A, Bruxner T, Cloonan N, Kolle G, Newell F, Pinese M, Scott Mead R, Humphris JL, Kaplan W, Jones MD, Colvin EK, Nagrial AM, Humphrey ES, Chou A, Chin VT, Chantrill LA, Mawson A, Samra JS, Kench JG, Lovell JA, Daly RJ, Merrett ND, Toon C, Epari K, Nguyen NQ, Barbour A, Zeps N, Biankin AV, Johns AL, Mawson A, Chang DK, Scarlett CJ, Brancato MA, Rowe SJ, Simpson SL, Martyn-Smith M, Thomas MT, Chantrill LA, Chin VT, Chou A, Cowley MJ, Humphris JL, Jones MD, Scott Mead R, Nagrial AM, Pajic M, Pettit J, Pinese M, Rooman I, Wu J, Tao J, Dipietro R, Watson C, Wong R, Pinho AV, Giry-Laterriere M, Daly RJ, Musgrove EA, Sutherland RL, Grimmond SM, Waddell N, Kassahn KS, Miller DK, Wilson PJ, Patch AM, Song S, Harliwong I, Idrisoglu S, Nourse C, Nourbakhsh E, Manning S, Wani S, Gongora M, Anderson M, Holmes O, Leonard C, Taylor D, Wood S, Xu C, Nones K, Lynn Fink J, Christ A, Bruxner T, Cloonan N, Newell F, Pearson JV, Samra JS, Gill AJ, Pavlakis N, Guminski A, Toon C, Biankin AV, Asghari R, Merrett ND, Chang DK, Pavey DA, Das A, Cosman PH, Ismail K, O'Connor C, Lam VW, McLeod D, Pleass HC, Richardson A, James V, Kench JG, Cooper CL, Joseph D, Sandroussi C, Crawford M, Gallagher J, Texler M, Forrest C, Laycock A, Epari KP, Ballal M, Fletcher DR, Mukhedkar S, Spry NA, Deboer B, Chai M, Zeps N, Beilin M, Feeney K, Nguyen NQ, Ruszkiewicz AR, Worthley C, Tan CP, Debrencini T, Chen J, Brooke-Smith ME, Papangelis V, Tang H, Barbour AP, Clouston AD, Martin P, O'Rourke TJ, Chiang A, Fawcett JW, Slater K, Yeung S, Hatzifotis M, Hodgkinson P, Christophi C, Nikfarjam M, Mountain Victorian Cancer Biobank A, Eshleman JR, Hruban RH, Maitra A, Iacobuzio-Donahue CA, Schulick RD, Wolfgang CL, Morgan RA, Hodgin MB, Scarpa A, Lawlor RT, Capelli P, Beghelli S, Corbo V, Scardoni M, Pederzoli P, Tortora G, Bassi C, Tempero MA, Kakkar N, Zhao F, Qing Wu Y, Wang M, Muzny DM, Fisher WE, Charles Brunicardi F, Hodges SE, Reid JG, Drummond J, Chang K, Han Y, Lewis LR, Dinh H, Buhay CJ, Beck T, Timms L, Sam M, Begley K, Brown A, Pai D, Panchal A, Buchner N, De Borja R, Denroche RE, Yung CK, Serra S, Onetto N, Mukhopadhyay D, Tsao MS, Shaw PA, Petersen GM, Gallinger S, Hruban RH, Maitra A, Iacobuzio-Donahue CA, Schulick RD, Wolfgang CL, Morgan RA, Lawlor RT, Capelli P, Corbo V, Scardoni M, Tortora G, Tempero MA, Mann KM, Jenkins NA, Perez-Mancera PA, Adams DJ, Largaespada DA, Wessels LF, Rust AG, Stein LD, Tuveson DA, Copeland NG, Musgrove EA, Scarpa A, Eshleman JR, Hudson TJ, Sutherland RL, Wheeler DA, Pearson JV, McPherson JD, Gibbs RA, Grimmond SM |
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Use of mutation profiles to refine the classification of endometrial carcinomas.
The Journal of pathology 2012 Sep 228 (1): 20-30. McConechy Melissa K, Ding Jiarui, Cheang Maggie C U, Wiegand Kimberly C, Senz Janine, Tone Alicia A, Yang Winnie, Prentice Leah M, Tse Kane, Zeng Thomas, McDonald Helen, Schmidt Amy P, Mutch David G, McAlpine Jessica N, Hirst Martin, Shah Sohrab P, Lee Cheng-Han, Goodfellow Paul J, Gilks C Blake, Huntsman David |
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Somatic mutations in the chromatin remodeling gene ARID1A occur in several tumor types.
Human mutation 2012 Jan 33 (1): 100-3. Jones Siân, Li Meng, Parsons D Williams, Zhang Xiaosong, Wesseling Jelle, Kristel Petra, Schmidt Marjanka K, Markowitz Sanford, Yan Hai, Bigner Darell, Hruban Ralph H, Eshleman James R, Iacobuzio-Donahue Christine A, Goggins Michael, Maitra Anirban, Malek Sami N, Powell Steve, Vogelstein Bert, Kinzler Kenneth W, Velculescu Victor E, Papadopoulos Nickol |
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PIK3CA mutations and loss of ARID1A protein expression are early events in the development of cystic ovarian clear cell adenocarcinoma.
Virchows Archiv : an international journal of pathology 2011 Nov . Yamamoto S, Tsuda H, Takano M, Tamai S, Matsubara O |
- Page last reviewed:Jul 30, 2019
- Page last updated:Oct 10, 2019
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