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HuGE Navigator|Phenopedia|PHGKB

Phenopedia


Brain Neoplasms

537 genes has been reported with Brain Neoplasms
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Associated Gene
Total Publication
Meta-analysis Publication
    IDH1 Genopedia 144 8
    EGFR Genopedia 91 4
    TP53 Genopedia 89 5
    IDH2 Genopedia 60 0
    TERT Genopedia 46 5
    MGMT Genopedia 42 8
    BRAF Genopedia 40 3
    KRAS Genopedia 23 2
    XRCC1 Genopedia 23 7
    CDKN2A Genopedia 22 1
    GSTT1 Genopedia 22 6
    GSTP1 Genopedia 21 4
    GSTM1 Genopedia 19 4
    PTEN Genopedia 19 1
    RTEL1 Genopedia 18 3
    PIK3CA Genopedia 15 1
    XRCC3 Genopedia 14 5
    ERCC2 Genopedia 14 6
    ATRX Genopedia 12 0
    PHLDB1 Genopedia 12 1
    ERCC1 Genopedia 12 6
    H3F3A Genopedia 11 1
    EGF Genopedia 11 2
    MTHFR Genopedia 10 2
    AIP Genopedia 10 0
    CCDC26 Genopedia 10 1
    ALK Genopedia 9 2
    MDM2 Genopedia 9 1
    ERBB2 Genopedia 9 1
    FGFR1 Genopedia 9 1
    IL4R Genopedia 8 2
    CCND1 Genopedia 8 2
    PDGFRA Genopedia 8 0
    CTNNB1 Genopedia 7 2
    IL13 Genopedia 7 1
    CDKN2B Genopedia 7 0
    MEN1 Genopedia 7 0
    NRAS Genopedia 7 1
    XRCC4 Genopedia 7 0
    KDR Genopedia 6 0
    AKT1 Genopedia 5 1
    IL10 Genopedia 5 0
    VEGFA Genopedia 5 0
    LIG4 Genopedia 5 0
    PARP1 Genopedia 5 3
    NQO1 Genopedia 5 0
    HLA-DRB1 Genopedia 5 0
    PON1 Genopedia 5 0
    ATM Genopedia 4 0
    NBN Genopedia 4 0
    APEX1 Genopedia 4 0
    ABCB1 Genopedia 4 0
    GNAS Genopedia 4 0
    NF1 Genopedia 4 0
    RB1 Genopedia 4 0
    PRKDC Genopedia 4 0
    GSTM3 Genopedia 4 0
    HIF1A Genopedia 4 0
    XRCC5 Genopedia 4 0
    RAF1 Genopedia 4 0
    MLH1 Genopedia 4 0
    CDKN2B-AS1 Genopedia 4 0
    IL4 Genopedia 4 0
    COX8A Genopedia 4 1
    NAT2 Genopedia 4 0
    SOD2 Genopedia 4 0
    MSH2 Genopedia 4 0
    RET Genopedia 3 0
    MSH6 Genopedia 3 0
    HLA-B Genopedia 3 0
    ERCC5 Genopedia 3 2
    HLA-DQB1 Genopedia 3 0
    MMP1 Genopedia 3 0
    NOS1 Genopedia 3 0
    EPHX1 Genopedia 3 0
    HLA-A Genopedia 3 0
    GPX1 Genopedia 3 0
    CDKN1A Genopedia 3 0
    CYP1A1 Genopedia 3 0
    ALAD Genopedia 3 0
    KIT Genopedia 3 0
    SMARCA4 Genopedia 3 0
    RAD51 Genopedia 3 0
    RAD52 Genopedia 3 0
    TERC Genopedia 3 0
    DRD2 Genopedia 3 0
    OGG1 Genopedia 3 1
    MMP3 Genopedia 2 0
    MAP2K7 Genopedia 2 0
    HIST1H3B Genopedia 2 1
    PTPN11 Genopedia 2 0
    BRCA1 Genopedia 2 0
    BRCA2 Genopedia 2 0
    MIR149 Genopedia 2 0
    MMP7 Genopedia 2 0
    ZHX2 Genopedia 2 0
    CAT Genopedia 2 0
    TSC1 Genopedia 2 0
    CHEK2 Genopedia 2 0
    ERCC4 Genopedia 2 0
    COMT Genopedia 2 1
    IL12B Genopedia 2 0
    SOD3 Genopedia 2 0
    CCND2 Genopedia 2 0
    BCORL1 Genopedia 2 0
    BCL2 Genopedia 2 0
    MIR146A Genopedia 2 0
    PTCH1 Genopedia 2 0
    OBFC1 Genopedia 2 0
    EML4 Genopedia 2 0
    MTRR Genopedia 2 0
    NOS3 Genopedia 2 0
    ACE Genopedia 2 0
    GLTSCR1 Genopedia 2 0
    ERCC6 Genopedia 2 0
    FLT3 Genopedia 2 0
    EME1 Genopedia 2 0
    MYBL1 Genopedia 2 0
    NF2 Genopedia 2 1
    QKI Genopedia 2 0
    CXCR4 Genopedia 2 0
    TSC2 Genopedia 2 0
    AKT2 Genopedia 2 0
    IGF1 Genopedia 2 0
    APOE Genopedia 2 0
    PDE11A Genopedia 2 0
    BCOR Genopedia 2 0
    CYP3A5 Genopedia 2 0
    CDKN1B Genopedia 2 0
    EFEMP1 Genopedia 2 0
    MTOR Genopedia 2 0
    XRCC6 Genopedia 2 0
    GLI2 Genopedia 2 0
    GNAI2 Genopedia 2 0
    XRCC2 Genopedia 2 0
    PRKAR1A Genopedia 2 0
    ABCG2 Genopedia 2 0
    ITGB3 Genopedia 2 0
    LIG1 Genopedia 2 0
    DDX3X Genopedia 2 0
    Alk Genopedia 2 0
    ACYP2 Genopedia 2 0
    ADAM33 Genopedia 2 0
    KIAA1549 Genopedia 2 0
    MMP9 Genopedia 2 0
    MYB Genopedia 2 0
    MTR Genopedia 2 0
    SMARCB1 Genopedia 2 0
    CASP8 Genopedia 2 0
    HLA-C Genopedia 2 0
    NOS2 Genopedia 2 0
    CDK4 Genopedia 2 0
    ABL1 Genopedia 2 0
    NEIL2 Genopedia 1 0
    Mapk1 Genopedia 1 0
    KCNH5 Genopedia 1 0
    GLI3 Genopedia 1 0
    CDK6 Genopedia 1 0
    CDKN2C Genopedia 1 0
    LRIG3 Genopedia 1 0
    COL1A1 Genopedia 1 0
    ESR1 Genopedia 1 0
    F13A1 Genopedia 1 0
    FGFR4 Genopedia 1 0
    PDXDC1 Genopedia 1 0
    FMO3 Genopedia 1 0
    NOMO1 Genopedia 1 0
    CASP14 Genopedia 1 0
    PAX7 Genopedia 1 0
    POLE Genopedia 1 0
    POMC Genopedia 1 0
    RAC2 Genopedia 1 0
    RAG1 Genopedia 1 0
    RASGRF2 Genopedia 1 0
    ZNF350 Genopedia 1 0
    IRGM Genopedia 1 0
    RAD51L3-RFFL Genopedia 1 0
    C10orf114 Genopedia 1 0
    MRE11A Genopedia 1 0
    ITGAL Genopedia 1 0
    ITPR3 Genopedia 1 0
    CASP9 Genopedia 1 0
    PPM1D Genopedia 1 0
    VAMP8 Genopedia 1 0
    ACVR1 Genopedia 1 0
    USP6 Genopedia 1 0
    PTTG1 Genopedia 1 0
    RECQL4 Genopedia 1 0
    FAM131B Genopedia 1 0
    GAB2 Genopedia 1 0
    SOD1 Genopedia 1 0
    SHFM1 Genopedia 1 0
    CWH43 Genopedia 1 0
    SYK Genopedia 1 0
    TCN2 Genopedia 1 0
    TGFB1 Genopedia 1 0
    MUTYH Genopedia 1 0
    COX1 Genopedia 1 0
    RRM1 Genopedia 1 0
    BDNF Genopedia 1 1
    SCN9A Genopedia 1 0
    NOTCH1 Genopedia 1 0
    PAX3 Genopedia 1 0
    PIK3R1 Genopedia 1 0
    CHRNA9 Genopedia 1 0
    TRPV5 Genopedia 1 0
    SLC2A4RG Genopedia 1 0
    AICDA Genopedia 1 0
    RFC1 Genopedia 1 0
    PRDM14 Genopedia 1 0
    SLC1A2 Genopedia 1 0
    SMARCA2 Genopedia 1 0
    SOAT1 Genopedia 1 0
    MAP3K7 Genopedia 1 0
    NR2F2 Genopedia 1 0
    UGT2B7 Genopedia 1 0
    VDR Genopedia 1 0
    CLPTM1L Genopedia 1 0
    BRIP1 Genopedia 1 0
    NMI Genopedia 1 0
    CALCA Genopedia 1 0
    NUP214 Genopedia 1 0
    GHR Genopedia 1 0
    GNAI3 Genopedia 1 0
    P2RY8 Genopedia 1 0
    NR3C1 Genopedia 1 0
    HEY1 Genopedia 1 0
    ALOX5 Genopedia 1 0
    ALDH3A1 Genopedia 1 0
    SLC39A11 Genopedia 1 0
    WDR65 Genopedia 1 0
    CYP2D6 Genopedia 1 0
    ARFRP1 Genopedia 1 0
    TUBB3 Genopedia 1 0
    PKD1L2 Genopedia 1 0
    IL22RA2 Genopedia 1 0
    LOX Genopedia 1 0
    MAP2 Genopedia 1 0
    MC1R Genopedia 1 0
    ARCN1 Genopedia 1 0
    KCNA4 Genopedia 1 0
    MLL Genopedia 1 0
    HNF4A Genopedia 1 0
    IFNG Genopedia 1 0
    AQP1 Genopedia 1 0
    INHBC Genopedia 1 0
    ATP2C2 Genopedia 1 0
    MVP Genopedia 1 0
    PROX1 Genopedia 1 0
    MUS81 Genopedia 1 0
    ARID1A Genopedia 1 0
    AXIN1 Genopedia 1 0
    ATG10 Genopedia 1 0
    DTNBP1 Genopedia 1 1
    RAD54L Genopedia 1 0
    NT5C1A Genopedia 1 0
    CCT Genopedia 1 0
    ATG12 Genopedia 1 0
    SLC12A5 Genopedia 1 0
    BCHE Genopedia 1 0
    BCL6 Genopedia 1 0
    SLC8A1 Genopedia 1 0
    STAT5B Genopedia 1 0
    AURKA Genopedia 1 0
    STK11 Genopedia 1 0
    GRIK4 Genopedia 1 0
    GRM1 Genopedia 1 0
    MARCH8 Genopedia 1 0
    ZSCAN23 Genopedia 1 0
    HARS2 Genopedia 1 0
    SSBP2 Genopedia 1 0
    Erbb2 Genopedia 1 0
    IL27 Genopedia 1 0
    Scrib Genopedia 1 0
    Cyp2b10 Genopedia 1 0
    CYP1B1 Genopedia 1 0
    CYP3A7 Genopedia 1 0
    KCNG3 Genopedia 1 0
    TRAP Genopedia 1 0
    RAD50 Genopedia 1 0
    ATG16L1 Genopedia 1 0
    MUT Genopedia 1 0
    MYH11 Genopedia 1 0
    LEF1 Genopedia 1 0
    PLAG1 Genopedia 1 0
    IL7 Genopedia 1 0
    ITGB1 Genopedia 1 0
    FEZF1 Genopedia 1 0
    SMAD3 Genopedia 1 0
    MC4R Genopedia 1 0
    PTK2B Genopedia 1 0
    IFNAR2 Genopedia 1 0
    SPOP Genopedia 1 0
    ZGPAT Genopedia 1 0
    RUNX1T1 Genopedia 1 0
    CRADD Genopedia 1 0
    WISP2 Genopedia 1 0
    CCNH Genopedia 1 0
    KCNB2 Genopedia 1 0
    SYTL3 Genopedia 1 0
    ATG5 Genopedia 1 0
    CDK1 Genopedia 1 0
    WDR1 Genopedia 1 0
    CACNA1A Genopedia 1 0
    MYCN Genopedia 1 0
    ATP2B1 Genopedia 1 0
    PDCD1 Genopedia 1 0
    PDGFB Genopedia 1 0
    PIK3C2G Genopedia 1 0
    PPP3CA Genopedia 1 0
    C3orf10 Genopedia 1 0
    RBBP6 Genopedia 1 0
    ROS1 Genopedia 1 0
    SDHC Genopedia 1 0
    SEL1L Genopedia 1 0
    DCLRE1C Genopedia 1 0
    ATG3 Genopedia 1 0
    SSTR2 Genopedia 1 0
    TCF3 Genopedia 1 0
    TCF7 Genopedia 1 0
    CYP2C8 Genopedia 1 0
    DRD5 Genopedia 1 0
    VTI1A Genopedia 1 0
    KIF18B Genopedia 1 0
    CHEK1 Genopedia 1 0
    CHI3L1 Genopedia 1 0
    ASTN2 Genopedia 1 0
    FMO1 Genopedia 1 0
    DICER1 Genopedia 1 0
    GNAI1 Genopedia 1 0
    FAT1 Genopedia 1 0
    IKZF3 Genopedia 1 0
    H2AFX Genopedia 1 0
    HIC1 Genopedia 1 1
    MIR196A2 Genopedia 1 0
    HLA-DQA1 Genopedia 1 0
    APC Genopedia 1 0
    IGFBP3 Genopedia 1 0
    IL8 Genopedia 1 0
    AR Genopedia 1 0
    ITGAV Genopedia 1 0
    KCNH1 Genopedia 1 0
    KCNJ15 Genopedia 1 0
    NTRK2 Genopedia 1 0
    NUP98 Genopedia 1 0
    PAK3 Genopedia 1 0
    PCNA Genopedia 1 0
    IFNA2 Genopedia 1 0
    IFNGR1 Genopedia 1 0
    IL5RA Genopedia 1 0
    PTGS2 Genopedia 1 0
    PTK2 Genopedia 1 0
    STIM2 Genopedia 1 0
    RAD23B Genopedia 1 0
    OPN1SW Genopedia 1 0
    SHH Genopedia 1 0
    STIL Genopedia 1 0
    HOTAIR Genopedia 1 0
    ATG7 Genopedia 1 0
    ZPBP2 Genopedia 1 0
    SETD2 Genopedia 1 0
    HRAS Genopedia 1 0
    ETV6 Genopedia 1 0
    FGFR3 Genopedia 1 0
    R3HDM2 Genopedia 1 0
    CRTC1 Genopedia 1 0
    Egfr Genopedia 1 0
    Kras Genopedia 1 0
    CYP2E1 Genopedia 1 0
    DMBT1 Genopedia 1 0
    EBF1 Genopedia 1 0
    MLLT10 Genopedia 1 0
    HMGA2 Genopedia 1 0
    FZD7 Genopedia 1 1
    MAML2 Genopedia 1 0
    CD2 Genopedia 1 0
    EXO1 Genopedia 1 0
    LRRC4B Genopedia 1 0
    CDH1 Genopedia 1 0
    STAT1 Genopedia 1 0
    ND1 Genopedia 1 0
    TAL1 Genopedia 1 0
    XPC Genopedia 1 0
    CACNA1C Genopedia 1 0
    ZNF208 Genopedia 1 0
    CACNA1S Genopedia 1 0
    SMAD6 Genopedia 1 0
    RNR1 Genopedia 1 0
    SLC39A9 Genopedia 1 0
    BTBD2 Genopedia 1 0
    CACNA2D3 Genopedia 1 0
    SCN3B Genopedia 1 0
    RAC1 Genopedia 1 0
    MBL2 Genopedia 1 0
    NCF4 Genopedia 1 0
    IL22 Genopedia 1 0
    PDGFRB Genopedia 1 0
    WWOX Genopedia 1 0
    RPA3 Genopedia 1 0
    RYR3 Genopedia 1 0
    SCN3A Genopedia 1 0
    SLC9A2 Genopedia 1 0
    AURKB Genopedia 1 0
    SOX9 Genopedia 1 0
    SSTR5 Genopedia 1 0
    STAT4 Genopedia 1 0
    SULT1A1 Genopedia 1 0
    TPMT Genopedia 1 0
    L2HGDH Genopedia 1 0
    MLL2 Genopedia 1 0
    ST6GALNAC5 Genopedia 1 0
    CACNA1H Genopedia 1 0
    JAK2 Genopedia 1 0
    ICAM1 Genopedia 1 0
    IFNAR1 Genopedia 1 0
    FASLG Genopedia 1 0
    IL6 Genopedia 1 0
    POLD1 Genopedia 1 0
    NEIL3 Genopedia 1 0
    IL17RB Genopedia 1 0
    PRKCA Genopedia 1 0
    MAPK3 Genopedia 1 0
    PRMT8 Genopedia 1 0
    SMARCAD1 Genopedia 1 1
    FCER1A Genopedia 1 0
    FOXO1 Genopedia 1 0
    GH1 Genopedia 1 0
    MLH3 Genopedia 1 0
    DKK3 Genopedia 1 0
    HFE Genopedia 1 0
    HLA-DRB3 Genopedia 1 0
    HOXC8 Genopedia 1 0
    Braf Genopedia 1 0
    CCR5 Genopedia 1 0
    RUNDC1 Genopedia 1 0
    ERBB3 Genopedia 1 0
    ERBB4 Genopedia 1 0
    TXN Genopedia 1 0
    XDH Genopedia 1 0
    SLC7A7 Genopedia 1 0
    NAF1 Genopedia 1 0
    ORMDL3 Genopedia 1 0
    GAL3ST1 Genopedia 1 0
    EPB41L3 Genopedia 1 1
    CIC Genopedia 1 0
    GNAQ Genopedia 1 0
    GRIN2B Genopedia 1 0
    TRPM5 Genopedia 1 0
    RPA4 Genopedia 1 0
    IGF1R Genopedia 1 0
    GEN1 Genopedia 1 0
    IL1A Genopedia 1 0
    IL12A Genopedia 1 0
    SLC9A4 Genopedia 1 0
    LPO Genopedia 1 0
    AOS Genopedia 1 0
    CHAF1A Genopedia 1 0
    RTEL1-TNFRSF6B Genopedia 1 0
    LRPPRC Genopedia 1 0
    MPHOSPH6 Genopedia 1 0
    TNIP1 Genopedia 1 0
    POMT1 Genopedia 1 0
    ZNF384 Genopedia 1 0
    MPO Genopedia 1 0
    MET Genopedia 1 0
    MMP2 Genopedia 1 0
    NEIL1 Genopedia 1 0
    MYO19 Genopedia 1 0
    MAP1LC3A Genopedia 1 0
    ATP12A Genopedia 1 0
    SUFU Genopedia 1 0
    PMS2 Genopedia 1 0
    SMOX Genopedia 1 0
    IMPACT Genopedia 1 0
    SLC39A4 Genopedia 1 0
    RAD51L1 Genopedia 1 0
    SCN1B Genopedia 1 0
    SCN5A Genopedia 1 0
    LRRC4 Genopedia 1 0
    NSD1 Genopedia 1 0
    SLC11A1 Genopedia 1 0
    HNF1A Genopedia 1 0
    C1QA Genopedia 1 0
    SST Genopedia 1 0
    STAT5A Genopedia 1 0
    STAT6 Genopedia 1 0
    TLR4 Genopedia 1 0
    D2HGDH Genopedia 1 0
    VHL Genopedia 1 0
    CTC1 Genopedia 1 0
    GPR101 Genopedia 1 0
    REN Genopedia 1 0
    SLC5A7 Genopedia 1 0
    RYR2 Genopedia 1 0
    SDHB Genopedia 1 0
    SDHD Genopedia 1 1
    CRLF2 Genopedia 1 0
    SFRP1 Genopedia 1 0
    SLC9A1 Genopedia 1 0
    SOX5 Genopedia 1 0
    KLF4 Genopedia 1 0
    CD163 Genopedia 1 0
    LRIG2 Genopedia 1 0
    RUNX1 Genopedia 1 0
    CBFB Genopedia 1 0
    CBS Genopedia 1 0
    FUBP1 Genopedia 1 0
    SPAG9 Genopedia 1 0
    B2M Genopedia 1 0
    TRNS1 Genopedia 1 0
    NCF2 Genopedia 1 0
    HARS Genopedia 1 0
    RAD54B Genopedia 1 0
    ABL2 Genopedia 1 0
    GLS2 Genopedia 1 0
    PBX1 Genopedia 1 0
    POLB Genopedia 1 0
    UGT1A1 Genopedia 1 0
    MAPK1 Genopedia 1 0
    MAP2K1 Genopedia 1 1
    NMUR1 Genopedia 1 0
    SLC30A9 Genopedia 1 0
    CHRNA3 Genopedia 1 0
    ZBTB46 Genopedia 1 0
    Pik3ca Genopedia 1 0
    AHR Genopedia 1 0
    ETFA Genopedia 1 0
    EWSR1 Genopedia 1 0
    FEN1 Genopedia 1 0
    IGF2 Genopedia 1 0
    IGF2R Genopedia 1 0
    FAS Genopedia 1 0
    IL1B Genopedia 1 0
    IL2 Genopedia 1 0
    IL16 Genopedia 1 0
    KCND2 Genopedia 1 0
    KCNK1 Genopedia 1 0
Note: The number of publications displayed in this table will differ from the number displayed in the HuGE Literature Finder as the number in Phenopedia reflects only the indexed disease term, but the number in the HuGE Literature Finder reflects all text searches of the disease term including the indexed term.
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