Last data update: Dec 09, 2024. (Total: 48320 publications since 2009)
Records 1-30 (of 58 Records) |
Query Trace: Hsiao H[original query] |
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Grip strength of law enforcement officers and its implications
Hsiao H . Appl Ergon 2024 122 104390 Grip strength (GS) plays a vital role for law enforcement officers (LEOs). This study aimed to establish a baseline for LEO GS, compare it with the general population, determine the correlation between LEO GS and body dimensions, and evaluate the implications for occupational performance. A total of 756 male and 218 female LEOs from across the U.S. participated in the study. On average, male LEOs exhibit stronger GS (49.53 kg) than female officers (32.14 kg). Significant differences between LEOs and the general population were observed. GS correlated with hand breadth, hand length, stature, and bideltoid breadth. Approximately 26%-46% of males and 5%-39% of females were identified as being at risk of health, fit, or occupational performance based on their measured GS. Enhancing GS training or avoiding implementing heavy equipment (such as pistols with heavy trigger weight), could improve officer occupational performance, safety, or health. |
PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and training
Griffiths EJ , Mendes I , Maguire F , Guthrie JL , Wee BA , Schmedes S , Holt K , Yadav C , Cameron R , Barclay C , Dooley D , MacCannell D , Chindelevitch L , Karsch-Mizrachi I , Waheed Z , Katz L , Petit Iii R , Dave M , Oluniyi P , Nasar MI , Raphenya A , Hsiao WWL , Timme RE . Microb Genom 2024 10 (6) As public health laboratories expand their genomic sequencing and bioinformatics capacity for the surveillance of different pathogens, labs must carry out robust validation, training, and optimization of wet- and dry-lab procedures. Achieving these goals for algorithms, pipelines and instruments often requires that lower quality datasets be made available for analysis and comparison alongside those of higher quality. This range of data quality in reference sets can complicate the sharing of sub-optimal datasets that are vital for the community and for the reproducibility of assays. Sharing of useful, but sub-optimal datasets requires careful annotation and documentation of known issues to enable appropriate interpretation, avoid being mistaken for better quality information, and for these data (and their derivatives) to be easily identifiable in repositories. Unfortunately, there are currently no standardized attributes or mechanisms for tagging poor-quality datasets, or datasets generated for a specific purpose, to maximize their utility, searchability, accessibility and reuse. The Public Health Alliance for Genomic Epidemiology (PHA4GE) is an international community of scientists from public health, industry and academia focused on improving the reproducibility, interoperability, portability, and openness of public health bioinformatic software, skills, tools and data. To address the challenges of sharing lower quality datasets, PHA4GE has developed a set of standardized contextual data tags, namely fields and terms, that can be included in public repository submissions as a means of flagging pathogen sequence data with known quality issues, increasing their discoverability. The contextual data tags were developed through consultations with the community including input from the International Nucleotide Sequence Data Collaboration (INSDC), and have been standardized using ontologies - community-based resources for defining the tag properties and the relationships between them. The standardized tags are agnostic to the organism and the sequencing technique used and thus can be applied to data generated from any pathogen using an array of sequencing techniques. The tags can also be applied to synthetic (lab created) data. The list of standardized tags is maintained by PHA4GE and can be found at https://github.com/pha4ge/contextual_data_QC_tags. Definitions, ontology IDs, examples of use, as well as a JSON representation, are provided. The PHA4GE QC tags were tested, and are now implemented, by the FDA's GenomeTrakr laboratory network as part of its routine submission process for SARS-CoV-2 wastewater surveillance. We hope that these simple, standardized tags will help improve communication regarding quality control in public repositories, in addition to making datasets of variable quality more easily identifiable. Suggestions for additional tags can be submitted to PHA4GE via the New Term Request Form in the GitHub repository. By providing a mechanism for feedback and suggestions, we also expect that the tags will evolve with the needs of the community. |
Human exposures to Brucella canis from a pregnant dog during an international flight: Public health risks, diagnostic challenges and future considerations
Williams C , Swisher S , Miller N , Pinn-Woodcock T , Austin C , Hsiao SH , Arenas-Gamboa AM , Tiller R , Thacker T , Taetzsch S , Franklin-Guild R , Cutter L , Quance C , Hung CC , Maddox CW , Ernst M , Guarino C , Lanka S , Garcia-Gonzalez DG , Slager S , Sunavala Z , Brown C , Negron M , Pieracci EG . Zoonoses Public Health 2024 AIMS: This report documents the exposure of passengers and crew of a commercial international flight to the zoonotic pathogen Brucella canis after an infected dog aborted in the passenger cabin of the aircraft. This case demonstrates the challenges associated with brucellosis screening and the risks that airline personnel, airport employees and travellers face when animals with unrecognized zoonotic infections are transported. METHODS/RESULTS: The public health investigation of this case was conducted by the Centers for Disease Control, the Illinois Department of Health and the Illinois Department of Agriculture, in collaboration with a local veterinary clinic and several academic and federal diagnostic laboratories. It included an extensive diagnostic evaluation of the dam and aborted foetuses to confirm a diagnosis of canine brucellosis. Passengers, airline personnel and staff from the veterinary clinic where the dogs were treated underwent risk assessments, and clinic staff also received detailed guidance regarding infection prevention practices. CONCLUSIONS: Animal shelters and breeding programs are recommended to screen dogs routinely for brucellosis, but it is not unusual for domestic or imported animals to have unknown health histories, including the dog's brucellosis status, at the time of purchase, adoption, or re-homing. Testing recommendations and requirements vary by state, making it challenging for state public health and animal health agencies to monitor and respond appropriately. This case highlights the importance of Brucella spp. screening in sexually intact dogs prior to breeding, purchase, or domestic or international transportation of the dogs. The transportation of pregnant dogs may present a previously unrecognized public health threat in addition to contributing to unnecessary stress and health risks for pregnant animals. |
A cluster-based law enforcement body armor sizing system: Concept, procedure, and design practice
Hsiao H , Kau TY , Bradtmiller B . Appl Ergon 2024 117 104201 Given the evolution of human body dimensions, the increasing diversity within the law enforcement workforce, the growing risks of assault faced by law enforcement officers (LEOs), and the absence of a national standard for body armor sizing, there is a critical need to explore LEO body size classification. This exploration will facilitate the development of an armor sizing structure that adequately accommodates the current LEO population. This study aimed to address this need by developing a LEO body armor sizing scheme and creating a sizing chart/app. Additionally, a plan was devised for a series of 'sizing vests' that would enhance LEO armor accommodation and facilitate fit assessment. Torso anthropometric data pertaining to body armor sizing were collected from 756 male and 218 female LEOs across different regions of the United States. Based on the collected data, a nine-size system for male LEOs and an eight-size scheme for female LEOs were suggested. Furthermore, a sizing chart/app was proposed to enable LEOs to swiftly identify an armor size that is most likely to fit an individual, considering a few anthropometric characteristics known to LEOs. To supplement the sizing chart/app, a series of 'sizing vests' were recommended. These vests would provide LEOs with a physical means to assess and determine the best-fitting armor size, offering an alternative to relying solely on the sizing chart/app. We recommend that armor manufacturers adopt these new sizing systems and create prototypes of armor that can be evaluated within this sizing structure. This evaluation process will facilitate improved fit and enhanced protection for LEOs. |
Treatments and severe outcomes for patients diagnosed with MIS-C at four children's hospitals in the United States, March 16, 2020-March 10, 2021
Shah AB , Abrams JY , Godfred-Cato S , Kunkel A , Hammett TA , Perez MA , Hsiao HM , Baida N , Rostad CA , Ballan W , Ede K , Laham FR , Kao CM , Oster ME , Belay ED . Pediatr Infect Dis J 2023 42 (11) 990-998 BACKGROUND: Clinical management of multisystem inflammatory syndrome in children (MIS-C) has varied over time and by medical institution. METHODS: Data on patients with MIS-C were collected from 4 children's hospitals between March 16, 2020 and March 10, 2021. Relationships between MIS-C treatments and patient demographics, clinical characteristics, and outcomes were described. Propensity score matching was utilized to assess the relative risk of outcomes dependent on early treatment with intravenous immunoglobulin (IVIG) or low-dose steroids, controlling for potential confounding variables. RESULTS: Of 233 patients diagnosed with MIS-C, the most commonly administered treatments were steroids (88.4%), aspirin (81.1%), IVIG (77.7%) and anticoagulants (71.2%). Compared with those patients without respiratory features, patients with respiratory features were less likely to receive IVIG and steroids on the same day (combination treatment) (44.1%). Controlling for confounding variables, patients receiving IVIG within 1 day of hospitalization were less likely to have hospital length of stay ≥8 days (RR = 0.53, 95% CI: 0.31-0.88). Patients receiving low-dose steroids within 1 day of hospitalization were less likely to develop ventricular dysfunction (RR = 0.45, 95% CI: 0.26-0.77), have increasingly elevated troponin levels (RR = 0.55, 95% CI: 0.40-0.75) or have hospital length of stay ≥8 days (RR = 0.46, 95% CI: 0.29-0.74). CONCLUSION: Treatments for MIS-C differed by hospital, patient characteristics and illness severity. When IVIG and low-dose steroids were administered in combination or low-dose steroids were administered alone within 1 day of hospitalization, the risk of subsequent severe outcomes was decreased. |
Long-term health outcomes after hospital discharge among children hospitalized for MIS-C or COVID-19, September 29, 2021, to June 21, 2022
Godfred-Cato S , Kunkel A , Abrams JY , Shah AB , Yousaf A , Hammett TA , Choi JH , Perez MA , Hsiao HM , Rostad CA , Laham FR , Kao CM , Hunstad DA , Oster ME , Campbell AP , Belay ED . Pediatr Infect Dis J 2024 BACKGROUND: The long-term effects of children hospitalized with multisystem inflammatory syndrome in children (MIS-C) or acute COVID-19 are not well known. Our objective was to determine long-term outcomes. METHODS: Children hospitalized with MIS-C or COVID-19 at 3 US hospitals from March 2020, through February 2021 were followed to assess health through 2 years post-hospitalization using medical records and patient surveys. RESULTS: Medical record abstraction was performed for 183 patients hospitalized with MIS-C, 53 of whom participated in surveys, and 97 patients hospitalized with COVID-19, 35 of whom participated in surveys. Patients with MIS-C were younger (median, 9 vs. 14 years of age for COVID-19 patients; P = 0.004), more frequently male (62% vs. 39%; P < 0.001) and had more cardiac (14% vs. 2%; P = 0.001) and neurologic sequelae (8% vs. 1%; P = 0.023). Children with COVID-19 more often had other comorbidities (59% vs. 19%; P < 0.001). Full mental recovery at the time of survey 2 (median, 16 months post-hospitalization for patients with MIS-C and 20 months for patients with COVID-19) was 85% and 88%, respectively; full physical recovery was 87% and 81%, respectively; and nearly all had resumption of normal activities. Patients with MIS-C reported more frequent headache at 1 month (45% vs. 20%; P = 0.037). Patients with COVID-19 were more likely to report cough at 1 month (37% vs. 17%; P = 0.045). Fatigue persisted >1 year in 15%-20% of patients in both groups. CONCLUSIONS: Approximately 20% of children with MIS-C and COVID-19 continued to have symptoms including fatigue and headache >1 year after hospital discharge. The duration of these findings emphasizes the importance of providers following patients until sequelae have resolved. |
Serologic Responses to COVID-19 Vaccination in Children with History of Multisystem Inflammatory Syndrome (MIS-C) (preprint)
Perez MA , Hsiao HM , Chen X , Kunkel A , Baida N , Hussaini L , Lu AT , Kao CM , Laham FR , Hunstad DA , Beltran Y , Hammett TA , Godfred-Cato S , Chahroudi A , Anderson EJ , Belay E , Rostad CA . medRxiv 2022 20 Understanding the serological responses to COVID-19 vaccination in children with history of MIS-C could inform vaccination recommendations. We prospectively enrolled five children hospitalized with MIS-C and measured SARS-CoV-2 binding IgG antibodies to spike protein variants longitudinally pre- and post-Pfizer-BioNTech BNT162b2 primary series COVID-19 vaccination. We found that SARS-CoV-2 variant cross-reactive IgG antibodies waned following acute MIS-C, but were significantly boosted with vaccination and maintained for at least 3 months. We then compared post-vaccination binding, pseudovirus neutralizing, and functional antibody-dependent cell-mediated cytotoxicity (ADCC) titers to the reference strain (Wuhan-hu-1) and Omicron variant (B.1.1.529) among previously healthy children (n=6) and children with history of MIS-C (n=5) or COVID-19 (n=5). Despite the breadth of binding antibodies elicited by vaccination in all three groups, pseudovirus neutralizing and ADCC titers were reduced to the Omicron variant. Vaccination after MIS-C or COVID-19 (hybrid immunity) conferred advantage in generating pseudovirus neutralizing and functional ADCC antibodies to Omicron. Copyright The copyright holder for this preprint is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license. |
Association of anthropometric characteristics of law enforcement officers with perceived ratings of fit, comfort, and pain in the use of body armor
Hsiao H . Ergonomics 2023 1-26 Knowledge gaps exist on association between law enforcement officer (LEO) anthropometric characteristics and perceived body armor fit, armor discomfort, and armor-caused pain. This study assessed the correlation and identified influential torso dimensions for armor sizing and design applications. Nine-hundreds and seventy-four LEOs across the U.S. participated in a national study on LEO armor use and body dimensions. Perceived ratings of armor fit, armor discomfort, and body pain were found moderately correlated with each other. In addition, armor fit ratings were associated with certain torso anthropometric characteristics, such as chest circumference, chest breadth, chest depth, waist circumference, waist breadth (sitting), waist front length (sitting), body weight, and body mass index. LEOs who reported armor poor fit, armor discomfort, and armor-caused pain had a larger mean of body dimensions than the "armor good fit" group. More women than men had poor fit, discomfort, and body pain in the use of body armor.Practitioner summary: The identified influential body measurements can be used as the "drivers" for multivariate analyses to develop an improved armor sizing system to further LEO protection. The study also suggests consideration of gender specific armor sizing systems to accommodate differences in torso configurations between male and female officers and to resolve the concern that more female officers had poor armor fit than male officers. |
SARS-CoV-2 Delta variant genomic variation associated with breakthrough infection in Northern California: A retrospective cohort study
Skarbinski J , Nugent JR , Wood MS , Liu L , Bullick T , Schapiro JM , Arunleung P , Morales C , Amsden LB , Hsiao CA , Wadford DA , Chai SJ , Reingold A , Wyman SK . J Infect Dis 2023 228 (7) 878-888 BACKGROUND: The association between SARS-CoV-2 genomic variation and breakthrough infection is not well-defined among persons with Delta variant SARS-CoV-2 infection. METHODS: In a retrospective cohort we assessed whether individual non-lineage defining mutations and overall genomic variation (including low frequency alleles) were associated with breakthrough infection defined as SARS-CoV-2 infection after COVID-19 primary vaccine series. We identified all non-synonymous single nucleotide polymorphisms, insertions and deletions in SARS-CoV-2 genomes with ≥5% allelic frequency and population frequency of ≥5% and ≤95%. Using Poisson regression, we assessed the association with breakthrough infection for each individual mutation and a viral genomic risk score. RESULTS: Thirty-six mutations met our inclusion criteria. Among 12,744 persons infected with Delta variant SARS-CoV-2, 5,949 (47%) were vaccinated and 6,795 (53%) were unvaccinated. Viruses with a viral genomic risk score in the highest quintile were 9% more likely to be associated with breakthrough infection than viruses in the lowest quintile, but including the risk score improved overall predictive model performance (measured by c-statistic) by only +0.0006. CONCLUSIONS: Genomic variation within SARS-CoV-2 Delta variant was weakly associated with breakthrough infection, however several potential non-lineage defining mutations were identified that might contribute to immune evasion by SARS-CoV-2. |
Serologic responses to COVID-19 vaccination in children with history of multisystem inflammatory syndrome (MIS-C)
Perez MA , Hsiao HM , Chen X , Kunkel A , Baida N , Hussaini L , Lu AT , Kao CM , Laham FR , Hunstad DA , Beltran Y , Hammett TA , Godfred-Cato S , Chahroudi A , Anderson EJ , Belay E , Rostad CA . Vaccine 2023 41 (17) 2743-2748 Understanding the serological responses to COVID-19 vaccination in children with history of MIS-C could inform vaccination recommendations. We prospectively enrolled seven children hospitalized with MIS-C and measured SARS-CoV-2 binding IgG antibodies to spike protein variants longitudinally pre- and post-Pfizer-BioNTech BNT162b2 primary series COVID-19 vaccination. We found that SARS-CoV-2 variant cross-reactive IgG antibodies variably waned following acute MIS-C, but were significantly boosted with vaccination and maintained for up to 3 months. We then compared post-vaccination binding, pseudovirus neutralizing, and functional antibody-dependent cell-mediated cytotoxicity (ADCC) titers to the reference strain (Wuhan-hu-1) and Omicron variant (B.1.1.529) among previously healthy children (n = 16) and children with history of MIS-C (n = 7) or COVID-19 (n = 8). Despite the breadth of binding antibodies elicited by vaccination in all three groups, pseudovirus neutralizing and ADCC titers were significantly reduced to the Omicron variant. |
Assessment of challenges in patrol vehicles and with equipment among law enforcement officers
Hsiao H . Appl Ergon 2022 108 103946 Understanding the challenges Law Enforcement Officers (LEOs) have encountered with their vehicle and equipment and the correlation between equipment configuration and LEO body dimensions is critical for improving vehicle/equipment specifications to better accommodate today's LEOs. 974 LEOs participated in a study on their vehicle, equipment, and body measurements at 12 sites across the U.S. 88% participants reported discomfort/pain at the end of a shift. The most affected body areas were the lower back and hips. Handguns, radios, and handcuffs on duty belt and seat adjustment were associated with the discomfort/pain. 41% LEOs identified inadequate seat adjustment. Stature, buttock-popliteal length, eye height (sitting), knee height (sitting), shoulder-grip length, popliteal height, sitting height, hip breadth, and body weight were key parameters associated with seat adjustment needs. A third of officers experienced neck pain associated with the use of in-vehicle mobile data terminals and more fore/aft adjustment was needed. |
Body models of law enforcement officers for cruiser cab accommodation simulation
Hsiao H , Kau TY , Whisler R , Zwiener J . Hum Factors 2022 187208221140220 OBJECTIVES: This study developed multivariate law enforcement officer (LEO) body models for digital simulation of LEO accommodation in police cruiser cabs. BACKGROUND: Anthropometrically accurate digital LEO body models, representing the United States LEOs, for computerized LEO cruiser interface simulations are lacking. METHODS: Twenty body dimensions (with and without gear combined) of 756 male and 218 female LEOs were collected through a stratified national survey using a data collection trailer that traveled across the US. A multivariate Principal Component Analysis (PCA) approach was used to develop digital LEO body models. RESULTS: Fifteen men and 15 women representing unique body size and shape composition of the LEO population were identified. A combined set of 24 male and female models (removal of 6 redundant models for which female and male models overlapped) is suggested. CONCLUSIONS: A set of 24 digital LEO body models in 3-dimensional form, along with their anthropometric measurements, were developed to facilitate LEO cruiser cab design. APPLICATION: Digital modeling software developers can use the models and their anthropometric data to build digital avatars for simulated evaluation of LEO cruiser cab configuration, console communication-equipment fitting, and cruiser ingress/egress access arrangement. LEO vehicle and equipment designers also can use eight key body dimensions (i.e., stature, buttock-popliteal length, eye height sitting, knee height sitting, shoulder-grip length, popliteal height, sitting height, and body weight) of the body models to recruit 24 human subjects to physically evaluate their vehicle prototypes for improved vehicle and equipment design. |
Evaluation of advanced curve speed warning system to prevent fire truck rollover crashes.
Simeonov P , Nimbarte A , Hsiao H , Current R , Ammons D , Choi HS , Rahman MM , Weaver D . J Safety Res 2022 83 388-399 Introduction: A disproportionately high number of deadly crash-incidents involve fire-tanker rollovers during emergency response driving. Most of these rollover incidents occur at dangerous horizontal curves (“curves”) due to unsafe speed. This study examined the effects of a curve speed warning system (CSWS) on fire tanker drivers’ emergency response behavior to develop system improvement suggestions. Method: Twenty-four firefighters participated in driving tests using a simulator. A fire tanker model, carrying a full tank of water, was used in emergency driving tests performed with and without CSWS. The CSWS was designed using the algorithm for passenger vehicles with a few initial modifications considering the unique requirements of heavy fire tanker and emergency driving. Results: The results indicated that the CSWS was effective in issuing preemptive warnings when the drivers were approaching curves with unsafe speed during emergency response. Warnings occurred more frequently at curves with smaller radius. Although the CSWS improved driving performance, it did not significantly reduce the number of rollover events. A detailed analysis of the rollover events provided suggestions for improvement of CSWS algorithms. Conclusions: To further improve the CSWS algorithm, the following may be considered: including increased safety speed margin below the rollover critical speed, moving the speed warning trigger from the curve apex to the curve entry point, extending the safe speed-control zone to cover the entire curve, and employing artificial intelligence to accommodate individual driving styles. Practical Applications: Fire tankers continue to be at increased risk of rollover during emergency response due to unsafe negotiation of dangerous curves. Development and use of advanced driver assist systems such as CSWS evaluated in this study may be an effective strategy to prevent deadly rollover crash-incidents. The knowledge generated by this study will be useful for system designers to improve the CSWS specifically designed for heavy emergency vehicles. © 2022 |
Assessing Progress Toward the Vision of a Comprehensive, Shared Electronic Care Plan: Scoping Review.
Norton JM , Ip A , Ruggiano N , Abidogun T , Camara DS , Fu H , Hose BZ , Miran S , Hsiao CJ , Wang J , Bierman AS . J Med Internet Res 2022 24 (6) e36569 BACKGROUND: Care plans are central to effective care delivery for people with multiple chronic conditions. But existing care plans-which typically are difficult to share across care settings and care team members-poorly serve people with multiple chronic conditions, who often receive care from numerous clinicians in multiple care settings. Comprehensive, shared electronic care (e-care) plans are dynamic electronic tools that facilitate care coordination and address the totality of health and social needs across care contexts. They have emerged as a potential way to improve care for individuals with multiple chronic conditions. OBJECTIVE: To review the landscape of e-care plans and care plan-related initiatives that could allow the creation of a comprehensive, shared e-care plan and inform a joint initiative by the National Institutes of Health and the Agency for Healthcare Research and Quality to develop e-care planning tools for people with multiple chronic conditions. METHODS: We conducted a scoping review, searching literature from 2015 to June 2020 using Scopus, Clinical Key, and PubMed; we also searched the gray literature. To identify initiatives potentially missing from this search, we interviewed expert informants. Relevant data were then identified and extracted in a structured format for data synthesis and analysis using an expanded typology of care plans adapted to our study context. The extracted data included (1) the perspective of the initiatives; (2) their scope, (3) network, and (4) context; (5) their use of open syntax standards; and (6) their use of open semantic standards. RESULTS: We identified 7 projects for e-care plans and 3 projects for health care data standards. Each project provided critical infrastructure that could be leveraged to promote the vision of a comprehensive, shared e-care plan. All the e-care plan projects supported both broad goals and specific behaviors; 1 project supported a network of professionals across clinical, community, and home-based networks; 4 projects included social determinants of health. Most projects specified an open syntax standard, but only 3 specified open semantic standards. CONCLUSIONS: A comprehensive, shared, interoperable e-care plan has the potential to greatly improve the coordination of care for individuals with multiple chronic conditions across multiple care settings. The need for such a plan is heightened in the wake of the ongoing COVID-19 pandemic. While none of the existing care plan projects meet all the criteria for an optimal e-care plan, they all provide critical infrastructure that can be leveraged as we advance toward the vision of a comprehensive, shared e-care plan. However, critical gaps must be addressed in order to achieve this vision. |
Changes in cervical cytology results and human papillomavirus types among persons screened for cervical cancer, 2007 and 2015-2017
Lewis RM , Naleway AL , Klein NP , Crane B , Hsiao A , Aukes L , Timbol J , Querec TD , Steinau M , Weinmann S , Unger ER , Markowitz LE . J Low Genit Tract Dis 2022 26 (2) 135-139 OBJECTIVES: Since 2006, the US human papillomavirus (HPV) vaccination program has led to decreases in HPV infections caused by high-risk vaccine-targeted HPV types (HPV 16/18). We assessed differences in high-risk HPV prevalence by cervical cytology result among 20- to 24-year-old persons participating in routine cervical cancer screening in 2015-2017 compared with 2007. MATERIALS AND METHODS: Residual routine cervical cancer screening specimens were collected from 20- to 24-year-old members of 2 integrated healthcare delivery systems as part of a cross-sectional study and were tested for 37 HPV types. Cytology results and vaccination status (1 dose) were extracted from medical records. Cytology categories were normal, atypical squamous cells of undefined significance, low-grade squamous intraepithelial lesions (SIL), or high-grade SIL/atypical squamous cells cannot exclude high-grade SIL. Prevalences of HPV categories (HPV 16/18, HPV 31/33/45/52/58, HPV 35/39/51/56/59/66/68) were estimated by cytology result for 2007 and 2015-2017. RESULTS: Specimens from 2007 (n = 4046) were from unvaccinated participants; 4574 of 8442 specimens (54.2%) from 2015-2017 were from vaccinated participants. Overall, HPV 16/18 positivity was lower in 2015-2017 compared with 2007 in all groups: high-grade SIL/atypical squamous cells cannot exclude high-grade SIL, 16.0% vs 69.2%; low-grade SIL, 5.4% vs 40.1%; atypical squamous cells of undefined significance, 5.0% vs 25.6%; and normal, 1.3% vs 8.1%. Human papillomavirus 31/33/45/52/58 prevalence was stable for all cytology groups; HPV 35/39/51/56/59/66/68 prevalence increased among low-grade SIL specimens (53.9% to 65.2%) but remained stable in other groups. CONCLUSIONS: Prevalence of vaccine-targeted high-risk HPV types 16/18 was dramatically lower in 2015-2017 than 2007 across all cytology result groups while prevalence of other high-risk HPV types was mainly stable, supporting vaccine impact with no evidence of type replacement. |
Serologic and Cytokine Signatures in Children With Multisystem Inflammatory Syndrome and Coronavirus Disease 2019.
Lapp SA , Abrams J , Lu AT , Hussaini L , Kao CM , Hunstad DA , Rosenberg RB , Zafferani MJ , Ede KC , Ballan W , Laham FR , Beltran Y , Hsiao HM , Sherry W , Jenkins E , Jones K , Horner A , Brooks A , Bryant B , Meng L , Hammett TA , Oster ME , Bamrah-Morris S , Godfred-Cato S , Belay E , Chahroudi A , Anderson EJ , Jaggi P , Rostad CA . Open Forum Infect Dis 2022 9 (3) ofac070 BACKGROUND: The serologic and cytokine responses of children hospitalized with multisystem inflammatory syndrome (MIS-C) vs coronavirus disease 2019 (COVID-19) are poorly understood. METHODS: We performed a prospective, multicenter, cross-sectional study of hospitalized children who met the Centers for Disease Control and Prevention case definition for MIS-C (n = 118), acute COVID-19 (n = 88), or contemporaneous healthy controls (n = 24). We measured severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike receptor-binding domain (RBD) immunoglobulin G (IgG) titers and cytokine concentrations in patients and performed multivariable analysis to determine cytokine signatures associated with MIS-C. We also measured nucleocapsid IgG and convalescent RBD IgG in subsets of patients. RESULTS: Children with MIS-C had significantly higher SARS-CoV-2 RBD IgG than children with acute COVID-19 (median, 2783 vs 146; P < .001), and titers correlated with nucleocapsid IgG. For patients with MIS-C, RBD IgG titers declined in convalescence (median, 2783 vs 1135; P = .010) in contrast to patients with COVID-19 (median, 146 vs 4795; P < .001). MIS-C was characterized by transient acute proinflammatory hypercytokinemia, including elevated levels of interleukin (IL) 6, IL-10, IL-17A, and interferon gamma (IFN-γ). Elevation of at least 3 of these cytokines was associated with significantly increased prevalence of prolonged hospitalization ≥8 days (prevalence ratio, 3.29 [95% CI, 1.17-9.23]). CONCLUSIONS: MIS-C was associated with high titers of SARS-CoV-2 RBD IgG antibodies and acute hypercytokinemia with IL-6, IL-10, IL-17A, and IFN-γ. |
Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.
Griffiths EJ , Timme RE , Mendes CI , Page AJ , Alikhan NF , Fornika D , Maguire F , Campos J , Park D , Olawoye IB , Oluniyi PE , Anderson D , Christoffels A , da Silva AG , Cameron R , Dooley D , Katz LS , Black A , Karsch-Mizrachi I , Barrett T , Johnston A , Connor TR , Nicholls SM , Witney AA , Tyson GH , Tausch SH , Raphenya AR , Alcock B , Aanensen DM , Hodcroft E , Hsiao WWL , Vasconcelos ATR , MacCannell DR . Gigascience 2022 11 BACKGROUND: The Public Health Alliance for Genomic Epidemiology (PHA4GE) (https://pha4ge.org) is a global coalition that is actively working to establish consensus standards, document and share best practices, improve the availability of critical bioinformatics tools and resources, and advocate for greater openness, interoperability, accessibility, and reproducibility in public health microbial bioinformatics. In the face of the current pandemic, PHA4GE has identified a need for a fit-for-purpose, open-source SARS-CoV-2 contextual data standard. RESULTS: As such, we have developed a SARS-CoV-2 contextual data specification package based on harmonizable, publicly available community standards. The specification can be implemented via a collection template, as well as an array of protocols and tools to support both the harmonization and submission of sequence data and contextual information to public biorepositories. CONCLUSIONS: Well-structured, rich contextual data add value, promote reuse, and enable aggregation and integration of disparate datasets. Adoption of the proposed standard and practices will better enable interoperability between datasets and systems, improve the consistency and utility of generated data, and ultimately facilitate novel insights and discoveries in SARS-CoV-2 and COVID-19. The package is now supported by the NCBI's BioSample database. |
Encumbered and Traditional Anthropometry of Law Enforcement Officers for Vehicle Workspace and Protective Equipment Design
Hsiao H , Whisler R , Weaver D , Hause M , Newbraugh B , Zwiener J , Ronaghi M , Bradtmiller B , Rockwell B , McDougall V , Brake T . Hum Factors 2021 66 (1) 187208211064371 OBJECTIVES: This study investigated anthropometric changes of national law enforcement officers (LEOs) in 46 years, compared the differences between LEO data and civilian anthropometry, and identified the magnitude of differences in dimensions measured with gear versus semi-nude measurements. BACKGROUND: The best available 46-year-old anthropometric dataset of LEOs has largely become outdated due to demographic changes. Additionally, anthropometric data of female LEOs and LEO measurements with gear are lacking. METHOD: Thirty-four traditional body dimensions and 15 with gear measurements of 756 male and 218 female LEOs were collected through a stratified national survey using a data collection trailer that traveled across the U.S. and the data were compared to the LEO anthropometric data from 1975 and existing civilian anthropometric databases. RESULTS: LEO body size and shape have evolved over the past 46 years - an increase of 12.2 kg in body weight, 90 mm in chest circumference, and 120 mm in waist circumference for men. No previous data was available for comparison for females. Compared to civilians, both male and female LEOs have a larger upper body build. LEO gear added 91 mm in waist breadth for men and 120 mm for women, and 11 kg in weight for men and 9 kg for women. CONCLUSION: The study reveals that equipment design based on the existing civilian datasets or 46-year-old LEO dataset would not accommodate the current LEO population. The new data fill this gap. Application: The differences reported above are important for LEO body gear, vehicle console, and vehicle ingress/egress design. |
Selected movement and force pattern differences in rail- and rung-climbing of fire apparatus aerial ladders at 52.5 slope
Fu QA , Simeonov P , Hsiao H , Woolley C , Armstrong TJ . Appl Ergon 2021 99 103639 This study compares human climbing performance, including climbing speed and movement and force patterns, between rail- and rung-climbing styles for a moderate aerial ladder slope (52.5°). Hand and foot movements and forces were recorded for 9 male and 10 female firefighters as they ascended and descended a 3.4-m ladder using elevated handrails (rail-climbing) or rungs (rung-climbing) for hand support. The results indicated that climbers used three or more points of contact 54% of the time for rung-climbing and 100% of the time for rail-climbing. Furthermore, rail-climbing was 10% faster than rung-climbing. In rail-climbing, the lateral hand forces were mostly directed away from the body; while during rung-climbing, they were alternated in lateral and medial directions. Overall, the results suggested that rail-climbing provides better control over body positioning and faster climbing speed. Furthermore, the continuous contact of both hands in rail-climbing may reduce the fall risk by facilitating the recovery from a slip or perturbation. |
Evaluation of advanced curve speed warning system for fire trucks
Simeonov P , Hsiao H , Nimbarte A , Current R , Ammons D , Choi HS , Rahman MM , Weaver D . Appl Ergon 2021 97 103527 A curve speed warning system (CSWS) for firetrucks was developed and tested in this study. The CSWS algorithm was developed based on guidelines in the public domain for general vehicles and modified for firetrucks for their configuration and emergency driving. Twenty-four firefighters participated in the test in a driving simulator. The results show that the CSWS was effective in issuing preemptive warnings when the drivers were approaching curves with unsafe speed during emergency responses. Drivers reduced their driving speed at curve approaching and entering phases for most challenging curves, without affecting the overall time in completing the test route. Drivers had reduced number of severe braking and decreased average in-curve distance traveled over the safety speed limits, when the CSWS was in use. Drivers also rated the CSWS as assisting, effective and useful. In summary, the CSWS can enhance firetruck safety during emergency driving without sacrificing drivers' precious response time. |
Needs and Procedures for a National Anthropometry Study of Law Enforcement Officers
Hsiao H , Whisler R , Bradtmiller B . Hum Factors 2021 65 (3) 187208211019157 OBJECTIVES: This research aims to determine the need and extent for a national anthropometry survey of law enforcement officers (LEOs) via an exploratory investigation of anthropometric changes of LEOs in four decades and comparisons of the LEO data with three existing military and civilian anthropometry sources. BACKGROUND: The best available anthropometric dataset of LEOs is 45 years old and has largely become outdated due to demographic changes. Assessing the extent of anthropometric changes of LEOs through a sample and evaluating the differences of the sample against existing anthropometric datasets is a step toward ascertaining the necessity for a national LEO anthropometry study. METHOD: Thirty-two body dimensions of 67 regional male LEOs and seven female LEOs were measured, and the data of males were compared with the best available LEO anthropometry data from 1975 and three recent non-LEO anthropometry databases. RESULTS: Anthropometric dimensions were significantly different between this LEO study and existing data sources, especially in chest circumference and body weight. Most of the significant differences are important differences for LEO protective gear and vehicle design. CONCLUSION: The study confirmed that the existing 45-year-old LEO dataset and recent Army and civilian datasets would not be suitable for armor and equipment design for the current LEO population. APPLICATION: The study results are useful in supporting the decision of investing in a national LEO anthropometry survey and for equipment manufacturers to recognize the distinctiveness of LEO anthropometry from other populations and the magnitude of anthropometry changes of LEOs over the past 45 years. |
Anthropometric study of emergency medical services providers (EMSP) in the United States
Guan J , Hsiao H , Green JD , Whisler R . J Safety Res 2020 74 187-197 Introduction: Design of next-generation ambulance patient compartment requires up-to date anthropometric data of emergency medical service providers (EMSP). Currently, no such data exist in the U.S. A large-scale anthropometric study of EMSP in the U.S. were conducted. This report provided the summary statistics (means, standard deviation, and percentiles) of the study's results and examined the anthropometric differences between the EMSP dataset and the U.S. general population, and between the EMSP dataset and U.S. military personnel dataset, respectively. Method: An anthropometric study of 471 male and 161 female EMSP from across the continental US was conducted, using a sampling strategy that took into account age, sex, and race strata. Results: On average, male EMSP were found to be 18 mm taller and 7 kg heavier than US male general population, and 19 mm taller and 11 kg heavier than US male military personnel. Female EMSP were found to be 25 mm taller than US female general population, and 10 kg heavier than US female military personnel. Conclusions: These results showed that it would be inappropriate to apply general population or military data to the design of next-generation ambulance patient compartment. This new dataset provided the most recent and accurate EMSP anthropometric measurements available in the US. Practical Application: Data from this study provided an invaluable resource for the design of next-generation ambulances in the US. |
Human papillomavirus vaccine effectiveness against HPV infection: Evaluation of one, two, and three doses
Markowitz LE , Naleway AL , Klein NP , Lewis RM , Crane B , Querec TD , Hsiao A , Aukes L , Timbol J , Weinmann S , Liu G , Steinau M , Unger ER . J Infect Dis 2019 221 (6) 910-918 BACKGROUND: Highly effective human papillomavirus (HPV) vaccines are used in many national programs in 3- or 2-dose schedules. We examined HPV vaccine effectiveness against HPV prevalence by number of doses. METHODS: We collected residual liquid-based cytology samples from US women aged 20-29 years who were screened for cervical cancer. Women continuously enrolled from 2006 through the specimen collection date were analyzed. Specimens were tested using the Linear Array assay. We analyzed prevalence of quadrivalent HPV vaccine (4vHPV) types (HPV 6,11,16,18) and other HPV-type categories and determined prevalence ratios (PRs) and 95% confidence intervals (CIs) for 1, 2, and 3 compared with no vaccine doses. RESULTS: Among 4269 women, 1052 (24.6%) were unvaccinated, 2610 (61.1%) received 3 doses, 304 (7.1%) received 2 doses, and 303 (7.1%) received 1 dose. The 4vHPV-type prevalence was 7.4% among unvaccinated women compared with 1.7%, 1.0%, and 1.0% among 1-, 2-, and 3-dose recipients. Among women vaccinated at </=18 years, adjusted PRs for 1, 2, and 3 doses were 0.06 (95% CI, 0.01-0.42), 0.05 (95% CI, 0.01-0.39), and 0.06 (95% CI, 0.04-0.12). CONCLUSIONS: Among women who received their first dose at age </=18, estimated HPV vaccine effectiveness was high regardless of number of doses. |
Effects of aerial ladder rung spacing on firefighter climbing biomechanics
Simeonov P , Hsiao H , Armstrong T , Fu Q , Woolley C , Kau T-Y . Appl Ergon 2020 82 102911 This study investigated the effects of aerial ladder rung spacing on firefighter climbing biomechanics. Ten female and 9 male firefighters ascended and descended instrumented ladders with rungs spaced at 356 mm (current design) and 305 mm in a laboratory setup. The climbing tests were performed at five ladder slope and handrail conditions: 30 with low (305 mm) and high (914 mm) handrails, 52.5 with and without a low handrail, and 75 without a handrail. Foot and hand forces and body movements were recorded and used to calculate joint moments of the upper and lower body. Reduced rung spacing resulted in reduced foot forces, reduced hand forces, and reduced ankle transverse moment. It was also associated with increased climbing speed for female climbers, and increased ankle vertical overshoot. The results indicate that reduced rung spacing on aerial ladders may lead to lower biomechanical stress; better climbing efficiency and safety; and reduced climbing speed disparity across sexes. |
A biomechanical shoulder strain index based on stabilizing demand of shoulder joint
Chowdhury SK , Nimbarte AD , Hsiao H , Gopalakrishnan B , Jaridi M . Ergonomics 2018 61 (12) 1-38 Work-related shoulder joint disorders contribute considerably to absenteeism in the workplace. To identify the tasks that are stressful to the shoulder joint, a strain index was formulated based on the concept of concavity compression - a shoulder stabilizing mechanism. The magnitude and direction of the shoulder joint reaction forces were used in formulating the strain index. A two phase experiment was conducted. In phase 1, participants performed 30 different manual handling tasks. The tasks were categorized into low, medium, and high strain tasks based on their strain index values. In phase 2, out of the 30 tasks, repetitive exertions of three tasks (low, medium and high strain index values) were simulated using three external loads (0.91kg, 1.81kg, and 2.72kg). The muscle activity data recorded from eight shoulder muscles showed that tasks with higher strain index values induced significantly greater activation and muscle fatigue than tasks with lower strain index values. Practitioner Summary: The strain index developed in this study is a conclusive estimation of the concavity compression required for shoulder joint stabilization. It can be used to identify the activities that may contribute to the risks of shoulder disorders. |
Preventing emergency vehicle crashes: Status and challenges of human factors issues
Hsiao H , Chang J , Simeonov P . Hum Factors 2018 60 (7) 18720818786132 OBJECTIVE: This study reports current status of knowledge and challenges associated with the emergency vehicle (police car, fire truck, and ambulance) crashes, with respect to the major contributing risk factors. BACKGROUND: Emergency vehicle crashes are a serious nationwide problem, causing injury and death to emergency responders and citizens. Understanding the underlying causes of these crashes is critical for establishing effective strategies for reducing the occurrence of similar incidents. METHOD: We reviewed the broader literature associated with the contributing factors for emergency vehicle crashes: peer-reviewed journal papers; and reports, policies, and manuals published by government agencies, universities, and research institutes. RESULTS: Major risk factors for emergency vehicle crashes identified in this study were organized into four categories: driver, task, vehicle, and environmental factors. Also, current countermeasures and interventions to mitigate the hazards of emergency vehicle crashes were discussed, and new ideas for future studies were suggested. CONCLUSION: Risk factors, control measures, and knowledge gaps relevant to emergency vehicle crashes were presented. Six research concepts are offered for the human factors community to address. Among the topics are emergency vehicle driver risky behavior carryover between emergency response and return from a call, distraction in emergency vehicle driving, in-vehicle driver assistance technologies, vehicle red light running, and pedestrian crash control. APPLICATION: This information is helpful for emergency vehicle drivers, safety practitioners, public safety agencies, and research communities to mitigate crash risks. It also offers ideas for researchers to advance technologies and strategies to further emergency vehicle safety on the road. |
SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology.
Petkau A , Mabon P , Sieffert C , Knox NC , Cabral J , Iskander M , Weedmark K , Zaheer R , Katz LS , Nadon C , Reimer A , Taboada E , Beiko RG , Hsiao W , Brinkman F , Graham M , Van Domselaar G . Microb Genom 2017 3 (6) e000116 The recent widespread application of whole-genome sequencing (WGS) for microbial disease investigations has spurred the development of new bioinformatics tools, including a notable proliferation of phylogenomics pipelines designed for infectious disease surveillance and outbreak investigation. Transitioning the use of WGS data out of the research laboratory and into the front lines of surveillance and outbreak response requires user-friendly, reproducible and scalable pipelines that have been well validated. Single Nucleotide Variant Phylogenomics (SNVPhyl) is a bioinformatics pipeline for identifying highquality single-nucleotide variants (SNVs) and constructing a whole-genome phylogeny from a collection of WGS reads and a reference genome. Individual pipeline components are integrated into the Galaxy bioinformatics framework, enabling data analysis in a user-friendly, reproducible and scalable environment. We show that SNVPhyl can detect SNVs with high sensitivity and specificity, and identify and remove regions of high SNV density (indicative of recombination). SNVPhyl is able to correctly distinguish outbreak from non-outbreak isolates across a range of variant-calling settings, sequencing-coverage thresholds or in the presence of contamination. SNVPhyl is available as a Galaxy workflow, Docker and virtual machine images, and a Unix-based command-line application. SNVPhyl is released under the Apache 2.0 license and available at http://snvphyl.readthedocs.io/ or at https://github.com/phac-nml/snvphyl-galaxy. |
Evaluation of a "walk-through" ladder top design during ladder-roof transitioning tasks
Simeonov P , Hsiao H , Powers J , Ammons D , Kau T , Cantis D , Zwiener J , Weaver D . Appl Ergon 2017 59 460-469 This study evaluated the effect of an extension ladder "walk-through” top design on kinetic and kinematic behaviors and the outward destabilizing forces induced on the ladder during transitioning at elevation. Thirty-two male participants performed stepping tasks between a ladder top and a roof at simulated elevation in a surround-screen virtual-reality system. The experimental conditions included a "walk-through” and a standard ladder top section supported on flat and sloped roof surfaces. Three force platforms were placed under the ladder section and in the roof to measure propulsion forces during transitions. A motion measurement system was used to record trunk kinematics. The frictional demand at the virtual ladder base was also calculated. The results indicate that under optimal ladder setup (angle 75.5 °), the frictional demand at the ladder base remains relatively small for all experimental conditions. Also, the "walk through” ladder top eased the ladder-to-roof transitions but not the roof-to-ladder transitions. |
In which states are physician assistants or nurse practitioners more likely to work in primary care?
Hing E , Hsiao CJ . JAAPA 2015 28 (9) 46-53 OBJECTIVE: Examine availability of physician assistants (PAs) or nurse practitioners (NPs) in primary care physician practices by state and by state PA and NP scope-of-practice laws. METHODS: Availability of PAs and NPs in primary care practices was examined in multivariate analysis using a 2012 state-based, nationally representative survey of office-based physicians. Covariates included practice characteristics, state, and in a separate model, PA and NP scope-of-practice variables. RESULTS: After controlling for practice characteristics, higher use of PAs and NPs was found in three states (Minnesota, Montana, and South Dakota). In a separate model, higher use of PAs or NPs was associated with favorable PA scope-of-practice laws, but not with NP scope-of-practice laws. CONCLUSIONS: Higher availability of PAs or NPs was associated with favorable PA scope-of-practice laws. Lack of association between PA or NP availability and NP scope-of-practice laws requires further investigation. |
Firefighter hand anthropometry and structural glove sizing: a new perspective
Hsiao H , Whitestone J , Kau TY , Hildreth B . Hum Factors 2015 57 (8) 1359-77 OBJECTIVE: We evaluated the current use and fit of structural firefighting gloves and developed an improved sizing scheme that better accommodates the U.S. firefighter population. BACKGROUND: Among surveys, 24% to 30% of men and 31% to 62% of women reported experiencing problems with the fit or bulkiness of their structural firefighting gloves. METHOD: An age-, race/ethnicity-, and gender-stratified sample of 863 male and 88 female firefighters across the United States participated in the study. Fourteen hand dimensions relevant to glove design were measured. A cluster analysis of the hand dimensions was performed to explore options for an improved sizing scheme. RESULTS: The current national standard structural firefighting glove-sizing scheme underrepresents firefighter hand size range and shape variation. In addition, mismatch between existing sizing specifications and hand characteristics, such as hand dimensions, user selection of glove size, and the existing glove sizing specifications, is significant. An improved glove-sizing plan based on clusters of overall hand size and hand/finger breadth-to-length contrast has been developed. CONCLUSION: This study presents the most up-to-date firefighter hand anthropometry and a new perspective on glove accommodation. The new seven-size system contains narrower variations (standard deviations) for almost all dimensions for each glove size than the current sizing practices. APPLICATION: The proposed science-based sizing plan for structural firefighting gloves provides a step-forward perspective (i.e., including two women hand model-based sizes and two wide-palm sizes for men) for glove manufacturers to advance firefighter hand protection. |
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