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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Mar 22, 2023. (Total: 4244 publications since 2011)
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Records 1-9 (of 9 Records)
Query Trace: all>>Rory M Welsh[CDC Author]
MycoSNP: A Portable Workflow for Performing Whole-Genome Sequencing Analysis of Candida auris.
Ujwal R Bagal, John Phan, Rory M Welsh, Elizabeth Misas, Darlene Wagner, Lalitha Gade, Anastasia P Litvintseva, Christina A Cuomo, and Nancy A Chow
Methods in molecular biology (Clifton, N.J.) 2022 2517215-228
Notes from the Field: Early Evidence of the SARS-CoV-2 B.1.1.529 (Omicron) Variant in Community Wastewater - United States, November-December 2021.
Amy E Kirby, Rory M Welsh, Zachary A Marsh, Alexander T Yu, Duc J Vugia, Alexandria B Boehm, Marlene K Wolfe, Bradley J White, Shannon R Matzinger, Allison Wheeler, Laura Bankers, Kevin Andresen, Cristal Salatas, , Devon A Gregory, Marc C Johnson, Monica Trujillo, Sherin Kannoly, Davida S Smyth, John J Dennehy, Nicolae Sapoval, Katherine Ensor, Todd Treangen, Lauren B Stadler, and Loren Hopkins
MMWR. Morbidity and mortality weekly report 2022 71(3) 103-105
Skin Metagenomic Sequence Analysis of Early Candida auris Outbreaks in U.S. Nursing Homes.
Xin Huang, Rory M Welsh, Clay Deming, Diana M Proctor, Pamela J Thomas, , Gabrielle M Gussin, Susan S Huang, Heidi H Kong, Meghan L Bentz, Snigdha Vallabhaneni, Tom Chiller, Brendan R Jackson, Kaitlin Forsberg, Sean Conlan, Anastasia P Litvintseva, and Julia A Segre
mSphere 2021 e0028721
Integrated genomic, epidemiologic investigation of Candida auris skin colonization in a skilled nursing facility.
Diana M Proctor, Thelma Dangana, D Joseph Sexton, Christine Fukuda, Rachel D Yelin, Mary Stanley, Pamela B Bell, Sangeetha Baskaran, Clay Deming, Qiong Chen, Sean Conlan, Morgan Park, , Rory M Welsh, Snigdha Vallabhaneni, Tom Chiller, Kaitlin Forsberg, Stephanie R Black, Massimo Pacilli, Heidi H Kong, Michael Y Lin, Michael E Schoeny, Anastasia P Litvintseva, Julia A Segre, and Mary K Hayden
Nature medicine 2021
Candida auris Whole-Genome Sequence Benchmark Dataset for Phylogenomic Pipelines
Rory M Welsh, Elizabeth Misas, Kaitlin Forsberg, Meghan Lyman, and Nancy A Chow
Journal of fungi (Basel, Switzerland) 2021 7(3)
Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris.
José F Muñoz, Rory M Welsh, Terrance Shea, Dhwani Batra, Lalitha Gade, Dakota Howard, Lori A Rowe, Jacques F Meis, Anastasia P Litvintseva, and Christina A Cuomo
Genetics 2021
Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses.
Nancy A Chow, José F Muñoz, Lalitha Gade, Elizabeth L Berkow, Xiao Li, Rory M Welsh, Kaitlin Forsberg, Shawn R Lockhart, Rodney Adam, Alexandre Alanio, Ana Alastruey-Izquierdo, Sahar AlThawadi, Ana Belén Araúz, Ronen Ben-Ami, Amrita Bharat, Belinda Calvo, Marie Desnos-Ollivier, Patricia Escandón, Dianne Gardam, Revathi Gunturu, Christopher H Heath, Oliver Kurzai, Ronny Martin, Anastasia P Litvintseva, and Christina A Cuomo
mBio 2020 Apr (2)
Insights into the Unique Nature of the East Asian Clade of the Emerging Pathogenic Yeast, Candida auris .
Rory M Welsh, D Joseph Sexton, Kaitlin Forsberg, Snigdha Vallabhaneni, and Anastasia Litvintseva
Journal of clinical microbiology 2019 Feb
Molecular epidemiology of Candida auris in Colombia reveals a highly-related, country-wide colonization with regional patterns in Amphotericin B resistance.
Patricia Escandón, Nancy A Chow, Diego H Caceres, Lalitha Gade, Elizabeth L Berkow, Paige Armstrong, Sandra Rivera, Elizabeth Misas, Carolina Duarte, Heather Moulton-Meissner, Rory M Welsh, Claudia Parra, Luz Angela Pescador, Nohora Villalobos, Soraya Salcedo, Indira Berrio, Carmen Varón, Andrés Espinosa-Bode, Shawn R Lockhart, Brendan R Jackson, Anastasia P Litvintseva, Mauricio Beltran, and Tom M Chiller
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 May
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