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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 27, 2022. (Total: 4031 publications since 2011)
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Records 1-15 (of 15 Records)
Query Trace: all>>Jessica C Chen[CDC Author]
Molecular characterization of circulating Salmonella Typhi strains in an urban informal settlement in Kenya.
Caroline Ochieng, Jessica C Chen, Mike Powel Osita, Lee S Katz, Taylor Griswold, Victor Omballa, Eric Ng'eno, Alice Ouma, Newton Wamola, Christine Opiyo, Loicer Achieng, Patrick K Munywoki, Rene S Hendriksen, Molly Freeman, Matthew Mikoleit, Bonventure Juma, Godfrey Bigogo, Eric Mintz, Jennifer R Verani, Elizabeth Hunsperger, and Heather A Carleton
PLoS neglected tropical diseases 2022 16(8) e0010704
Genomic Diversity, Antimicrobial Resistance, and Virulence Gene Profiles of Salmonella Serovar Kentucky Isolated from Humans, Food, and Animal Ceca Content Sources in the United States.
Heather Tate, Chih-Hao Hsu, Jessica C Chen, Jing Han, Steven L Foley, Jason P Folster, Louise K Francois Watkins, Jared Reynolds, Glenn E Tillman, Epiphanie Nyirabahizi, and Shaohua Zhao
Foodborne pathogens and disease 2022 19(8) 509-521
SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data.
Taylor Griswold, Curtis Kapsak, Jessica C Chen, Henk C den Bakker, Grant Williams, Alyssa Kelley, Eshaw Vidyaprakash, and Lee S Katz
Journal of open source software 2022 6(60)
Correlation between Phenotypic and In Silico Detection of Antimicrobial Resistance in Salmonella enterica in Canada Using Staramr.
Amrita Bharat, Aaron Petkau, Brent P Avery, Jessica C Chen, Jason P Folster, Carolee A Carson, Ashley Kearney, Celine Nadon, Philip Mabon, Jeffrey Thiessen, David C Alexander, Vanessa Allen, Sameh El Bailey, Sadjia Bekal, Greg J German, David Haldane, Linda Hoang, Linda Chui, Jessica Minion, George Zahariadis, Gary Van Domselaar, Richard J Reid-Smith, and Michael R Mulvey
Microorganisms 2022 10(2)
Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022.
Anastasia S Lambrou, Philip Shirk, Molly K Steele, Prabasaj Paul, Clinton R Paden, Betsy Cadwell, Heather E Reese, Yutaka Aoki, Norman Hassell, Xiao-Yu Zheng, Sarah Talarico, Jessica C Chen, M Steven Oberste, Dhwani Batra, Laura K McMullan, Alison Laufer Halpin, Summer E Galloway, Duncan R MacCannell, Rebecca Kondor, John Barnes, Adam MacNeil, Benjamin J Silk, Vivien G Dugan, Heather M Scobie, David E Wentworth, ,
MMWR. Morbidity and mortality weekly report 2022 71(6) 206-211
Outbreak of Multidrug-Resistant Salmonella Heidelberg Infections Linked to Dairy Calf Exposure, United States, 2015-2018.
Megin Nichols, Lauren Gollarza, Donald Sockett, Nicole Aulik, Elisabeth Patton, Louise K Francois Watkins, Kelly J Gambino-Shirley, Jason P Folster, Jessica C Chen, Kaitlin A Tagg, Gregory Sean Stapleton, Eija Trees, Zachary Ellison, Jason Lombard, Brenda Morningstar-Shaw, Linda Schlater, Lina Elbadawi, and Rachel Klos
Foodborne pathogens and disease 2022
Update on Extensively Drug-Resistant Salmonella Serotype Typhi Infections Among Travelers to or from Pakistan and Report of Ceftriaxone-Resistant Salmonella Serotype Typhi Infections Among Travelers to Iraq - United States, 2018-2019.
Louise K François Watkins, Alison Winstead, Grace D Appiah, Cindy R Friedman, Felicita Medalla, Michael J Hughes, Meseret G Birhane, Zachary D Schneider, Perrine Marcenac, Samir S Hanna, Gauri Godbole, Kelly A Walblay, Ashley E Wiggington, Molly Leeper, Elizabeth H Meservey, Kaitlin A Tagg, Jessica C Chen, Abdinasir Abubakar, Faris Lami, Asaad M Asaad, Vickneswaran Sabaratnam, Aamer Ikram, Kristina M Angelo, Allison Walker, and Eric Mintz
MMWR. Morbidity and mortality weekly report 2020 69(20) 618-622
Novel quinolone resistance determinant, qepA8, in Shigella flexneri isolated in the United States, 2016.
Hattie E Webb, Kaitlin A Tagg, Jessica C Chen, Justin Kim, Rebecca Lindsey, Louise K Francois Watkins, Beth E Karp, Yo Sugawara, and Jason P Folster
Antimicrobial agents and chemotherapy 2019
Ongoing Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Associated With US Pet Store Puppies, 2016-2020.
Louise K Francois Watkins, Mark E Laughlin, Lavin A Joseph, Jessica C Chen, Megin Nichols, Colin Basler, Robert Breazu, Christy Bennett, Lia Koski, Martha P Montgomery, Michael J Hughes, Scott Robertson, Charlotte G Lane, Amber J Singh, Danielle Stanek, Ellen Salehi, Eric Brandt, Glen McGillivary, Jade Mowery, Jamie DeMent, Rachael D Aubert, Aimee L Geissler, Sietske de Fijter, Ian T Williams, and Cindy R Friedman
JAMA network open 2021 4(9) e2125203
Azithromycin and Ciprofloxacin Treatment Outcomes During an Outbreak of Multidrug-Resistant Shigella sonnei Infections in a Retirement Community-Vermont, 2018.
Radhika Gharpure, Cindy R Friedman, Veronica Fialkowski, Jennifer P Collins, Jonathan Strysko, Zachary A Marsh, Jessica C Chen, Elizabeth H Meservey, Azizat A Adediran, Morgan N Schroeder, Ashutosh Wadhwa, Kathleen E Fullerton, and Louise Francois Watkins
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021
Whole-Genome Sequencing Reveals the Presence of the blaCTX-M-65 Gene in Extended-Spectrum β-Lactamase-Producing and Multi-Drug-Resistant Clones of Salmonella Serovar Infantis Isolated from Broiler Chicken Environments in the Galapagos Islands
Elton Burnett, Maria Ishida, Sofia de Janon, Sohail Naushad, Marc-Olivier Duceppe, Ruimin Gao, Armando Jardim, Jessica C Chen, Kaitlin A Tagg, Dele Ogunremi, and Christian Vinueza-Burgos
Antibiotics (Basel, Switzerland) 2021 10(3)
Carriage and Gene Content Variability of the pESI-Like Plasmid Associated with Salmonella Infantis Recently Established in United States Poultry Production.
Elizabeth A McMillan, Jamie L Wasilenko, Kaitlin A Tagg, Jessica C Chen, Mustafa Simmons, Sushim K Gupta, Glenn E Tillman, Jason Folster, Charlene R Jackson, and Jonathan G Frye
Genes 2020 Dec 11(12)
Multidrug-Resistant Campylobacter jejuni Outbreak Linked to Puppy Exposure - United States, 2016-2018.
Martha P Montgomery, Scott Robertson, Lia Koski, Ellen Salehi, Lauren M Stevenson, Rachel Silver, Preethi Sundararaman, Amber Singh, Lavin A Joseph, Mary Beth Weisner, Eric Brandt, Melanie Prarat, Rick Bokanyi, Jessica C Chen, Jason P Folster, Christy T Bennett, Louise K Francois Watkins, Rachael D Aubert, Alvina Chu, Jennifer Jackson, Jason Blanton, Amber Ginn, Kirtana Ramadugu, Danielle Stanek, Jamie DeMent, Jing Cui, Yan Zhang, Colin Basler, Cindy R Friedman, Aimee L Geissler, Samuel J Crowe, Natasha Dowell, Staci Dixon, Laura Whitlock, Ian Williams, Michael A Jhung, Megin C Nichols, Sietske de Fijter, and Mark E Laughlin
MMWR. Morbidity and mortality weekly report 2018 Sep 67(37) 1032-1035
Outbreak of Salmonella Newport Infections with Decreased Susceptibility to Azithromycin Linked to Beef Obtained in the United States and Soft Cheese Obtained in Mexico - United States, 2018-2019.
Ian D Plumb, Colin A Schwensohn, Laura Gieraltowski, Selam Tecle, Zachary D Schneider, Jennifer Freiman, Andrea Cote, Douglas Noveroske, Jonathan Kolsin, Joshua Brandenburg, Jessica C Chen, Kaitlin A Tagg, Porscha Bumpus White, Hazel J Shah, Louise K Francois Watkins, Matthew E Wise, and Cindy R Friedman
MMWR. Morbidity and mortality weekly report 2019 Aug 68(33) 713-717
Genome wide characterization of enterotoxigenic Escherichia coli serogroup O6 isolates from multiple outbreaks and sporadic infections from 1975-2016.
Vaishnavi Pattabiraman, Lee S Katz, Jessica C Chen, Andre E McCullough, and Eija Trees
PloS one 2018 13(12) e0208735
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