CDC-Authored Genomics and Precision Health Publications Database

Last data update: Oct 28, 2020. (Total: 2994 publications since 2011)

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Records 1-10 (of 10 Records)

Query Trace: all>>John Barnes[CDC Author]
Detection of baloxavir resistant influenza A viruses using next generation sequencing and pyrosequencing methods. Mira C Patel, Vasiliy P Mishin, Juan A De La Cruz, Anton Chesnokov, Ha T Nguyen, Malania M Wilson, John Barnes, Rebecca J G Kondor, David E Wentworth, and Larisa V Gubareva Antiviral research 2020 Aug 104906 Similar articles in PubMed
Comparison of nucleic acid extraction methods for next-generation sequencing of avian influenza A virus from ferret respiratory samples. Han Di, Sharmi Thor, A Angelica Trujillo, Thomas Stark, Atanaska Marinova-Petkova, Joyce Jones, David E Wentworth, John Barnes, and C Todd Davis Journal of virological methods 2019 Apr Similar articles in PubMed
Insights into the antigenic advancement of influenza A(H3N2) viruses, 2011-2018. Patricia A Jorquera, Vasiliy P Mishin, Anton Chesnokov, Ha T Nguyen, Brian Mann, Rebecca Garten, John Barnes, Erin Hodges, Juan De La Cruz, Xiyan Xu, Jackie Katz, David E Wentworth, and Larisa V Gubareva Scientific reports 2019 Feb 9(1) 2676 Similar articles in PubMed
Update: Influenza Activity in the United States During the 2017-18 Season and Composition of the 2018-19 Influenza Vaccine. Rebecca Garten, Lenee Blanton, Anwar Isa Abd Elal, Noreen Alabi, John Barnes, Matthew Biggerstaff, Lynnette Brammer, Alicia P Budd, Erin Burns, Charisse N Cummings, Todd Davis, Shikha Garg, Larisa Gubareva, Yunho Jang, Krista Kniss, Natalie Kramer, Stephen Lindstrom, Desiree Mustaquim, Alissa O'Halloran, Wendy Sessions, Calli Taylor, Xiyan Xu, Vivien G Dugan, Alicia M Fry, David E Wentworth, Jacqueline Katz, and Daniel Jernigan MMWR. Morbidity and mortality weekly report 2018 Jun (22) 634-642 Similar articles in PubMed
Antigenically diverse swine-origin H1N1 variant influenza viruses exhibit differential ferret pathogenesis and transmission phenotypes. Joanna A Pulit-Penaloza, Joyce Jones, Xiangjie Sun, Yunho Jang, Sharmi Thor, Jessica A Belser, Natosha Zanders, Hannah M Creager, Callie Ridenour, Li Wang, Thomas J Stark, Rebecca Garten, Li-Mei Chen, John Barnes, Terrence M Tumpey, David E Wentworth, Taronna R Maines, and C Todd Davis Journal of virology 2018 Mar Similar articles in PubMed
A Pyrosequencing-Based Approach to High-Throughput Identification of Influenza A(H3N2) Virus Clades Harboring Antigenic Drift Variants. Vasiliy P Mishin, Tatiana Baranovich, Rebecca Garten, Anton Chesnokov, Anwar I Abd Elal, Michelle Adamczyk, Jennifer LaPlante, Kirsten St George, Alicia M Fry, John Barnes, Stephanie C Chester, Xiyan Xu, Jacqueline M Katz, David E Wentworth, and Larisa V Gubareva Journal of clinical microbiology 2016 Oct Similar articles in PubMed
Viral deep sequencing needs an adaptive approach: IRMA, the iterative refinement meta-assembler. Samuel S Shepard, Sarah Meno, Justin Bahl, Malania M Wilson, John Barnes, and Elizabeth Neuhaus BMC genomics 2016 708 Similar articles in PubMed
Good laboratory practice for clinical next-generation sequencing informatics pipelines. Amy S Gargis, Lisa Kalman, David P Bick, Cristina da Silva, David P Dimmock, Birgit H Funke, Sivakumar Gowrisankar, Madhuri R Hegde, Shashikant Kulkarni, Christopher E Mason, Rakesh Nagarajan, Karl V Voelkerding, Elizabeth A Worthey, Nazneen Aziz, John Barnes, Sarah F Bennett, Himani Bisht, Deanna M Church, Zoya Dimitrova, Shaw R Gargis, Nabil Hafez, Tina Hambuch, Fiona C L Hyland, Ruth Ann Luna, Duncan MacCannell, Tobias Mann, Megan R McCluskey, Timothy K McDaniel, Lilia M Ganova-Raeva, Heidi L Rehm, Jeffrey Reid, David S Campo, Richard B Resnick, Perry G Ridge, Marc L Salit, Pavel Skums, Lee-Jun C Wong, Barbara A Zehnbauer, Justin M Zook, and Ira M Lubin Nature biotechnology 2015 Jul (7) 689-93 Similar articles in PubMed
Oseltamivir-resistant influenza A(H1N1)pdm09 viruses, United States, 2013-14. Margaret Okomo-Adhiambo, Alicia M Fry, Su Su, Ha T Nguyen, Anwar Abd Elal, Elizabeth Negron, Julie Hand, Rebecca J Garten, John Barnes, Xu Xiyan, Julie M Villanueva, Larisa V Gubareva, and Emerging Infect. Dis. 2015 Jan 21(1) 136-41 Similar articles in PubMed
Application of real time RT-PCR for the genetic homogeneity and stability tests of the seed candidates for live attenuated influenza vaccine production. Svetlana Shcherbik, Sheila B Sergent, William G Davis, Bo Shu, John Barnes, Irina Kiseleva, Natalie Larionova, Alexander Klimov, and Tatiana Bousse J. Virol. Methods 2014 Jan 19518-25 Similar articles in PubMed