CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Feb 03, 2023. (Total: 4188 publications since 2011)

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Records 1-14 (of 14 Records)

Query Trace: all>>John Barnes[CDC Author]
Influenza Activity and Composition of the 2022-23 Influenza Vaccine - United States, 2021-22 Season. Angiezel Merced-Morales, Peter Daly, Anwar Isa Abd Elal, Noreen Ajayi, Ekow Annan, Alicia Budd, John Barnes, Arielle Colon, Charisse N Cummings, A Danielle Iuliano, Juliana DaSilva, Nick Dempster, Shikha Garg, Larisa Gubareva, Daneisha Hawkins, Amanda Howa, Stacy Huang, Marie Kirby, Krista Kniss, Rebecca Kondor, Jimma Liddell, Shunte Moon, Ha T Nguyen, Alissa O'Halloran, Catherine Smith, Thomas Stark, Katie Tastad, Dawud Ujamaa, Dave E Wentworth, Alicia M Fry, Vivien G Dugan, and Lynnette Brammer MMWR. Morbidity and mortality weekly report 2022 71(29) 913-919 Similar articles in PubMed DOI:10.15585/mmwr.mm7129a1
Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022. Anastasia S Lambrou, Philip Shirk, Molly K Steele, Prabasaj Paul, Clinton R Paden, Betsy Cadwell, Heather E Reese, Yutaka Aoki, Norman Hassell, Xiao-Yu Zheng, Sarah Talarico, Jessica C Chen, M Steven Oberste, Dhwani Batra, Laura K McMullan, Alison Laufer Halpin, Summer E Galloway, Duncan R MacCannell, Rebecca Kondor, John Barnes, Adam MacNeil, Benjamin J Silk, Vivien G Dugan, Heather M Scobie, David E Wentworth, , MMWR. Morbidity and mortality weekly report 2022 71(6) 206-211 Similar articles in PubMed DOI:10.15585/mmwr.mm7106a4
Prevention and Attenuation of Covid-19 with the BNT162b2 and mRNA-1273 Vaccines. Mark G Thompson, Jefferey L Burgess, Allison L Naleway, Harmony Tyner, Sarang K Yoon, Jennifer Meece, Lauren E W Olsho, Alberto J Caban-Martinez, Ashley L Fowlkes, Karen Lutrick, Holly C Groom, Kayan Dunnigan, Marilyn J Odean, Kurt Hegmann, Elisha Stefanski, Laura J Edwards, Natasha Schaefer-Solle, Lauren Grant, Katherine Ellingson, Jennifer L Kuntz, Tnelda Zunie, Matthew S Thiese, Lynn Ivacic, Meredith G Wesley, Julie Mayo Lamberte, Xiaoxiao Sun, Michael E Smith, Andrew L Phillips, Kimberly D Groover, Young M Yoo, Joseph Gerald, Rachel T Brown, Meghan K Herring, Gregory Joseph, Shawn Beitel, Tyler C Morrill, Josephine Mak, Patrick Rivers, Brandon P Poe, Brian Lynch, Yingtao Zhou, Jing Zhang, Anna Kelleher, Yan Li, Monica Dickerson, Erika Hanson, Kyley Guenther, Suxiang Tong, Allen Bateman, Erik Reisdorf, John Barnes, Eduardo Azziz-Baumgartner, Danielle R Hunt, Melissa L Arvay, Preeta Kutty, Alicia M Fry, and Manjusha Gaglani The New England journal of medicine 2021 7 (4) 320-329 Similar articles in PubMed DOI:10.1056/NEJMoa2107058
Evolution and rapid spread of a reassortant A(H3N2) virus that predominated the 2017-2018 influenza season. Barney I Potter, Rebecca Kondor, James Hadfield, John Huddleston, John Barnes, Thomas Rowe, Lizheng Guo, Xiyan Xu, Richard A Neher, Trevor Bedford, and David E Wentworth Virus evolution 2019 Jul 5(2) vez046 Similar articles in PubMed DOI:10.1093/ve/vez046
Detection and Characterization of Swine-origin Influenza A(H1N1) Pandemic 2009 Viruses in Humans Following Zoonotic Transmission. Peter W Cook, Thomas Stark, Joyce Jones, Rebecca Kondor, Natosha Zanders, Jeffrey Benfer, Samantha Scott, Yunho Jang, Alicia Janas-Martindale, Stephen Lindstrom, Lenee Blanton, John Schiltz, Rachel Tell, Richard Griesser, Peter Shult, Erik Reisdorf, Tonya Danz, Alicia Fry, John Barnes, Amy Vincent, David E Wentworth, and C Todd Davis Journal of virology 2020 Oct Similar articles in PubMed DOI:10.1128/JVI.01066-20
Detection of baloxavir resistant influenza A viruses using next generation sequencing and pyrosequencing methods. Mira C Patel, Vasiliy P Mishin, Juan A De La Cruz, Anton Chesnokov, Ha T Nguyen, Malania M Wilson, John Barnes, Rebecca J G Kondor, David E Wentworth, and Larisa V Gubareva Antiviral research 2020 Aug 104906 Similar articles in PubMed DOI:10.1016/j.antiviral.2020.104906
Comparison of nucleic acid extraction methods for next-generation sequencing of avian influenza A virus from ferret respiratory samples. Han Di, Sharmi Thor, A Angelica Trujillo, Thomas Stark, Atanaska Marinova-Petkova, Joyce Jones, David E Wentworth, John Barnes, and C Todd Davis Journal of virological methods 2019 Apr Similar articles in PubMed DOI:10.1016/j.jviromet.2019.04.014
Insights into the antigenic advancement of influenza A(H3N2) viruses, 2011-2018. Patricia A Jorquera, Vasiliy P Mishin, Anton Chesnokov, Ha T Nguyen, Brian Mann, Rebecca Garten, John Barnes, Erin Hodges, Juan De La Cruz, Xiyan Xu, Jackie Katz, David E Wentworth, and Larisa V Gubareva Scientific reports 2019 Feb 9(1) 2676 Similar articles in PubMed DOI:10.1038/s41598-019-39276-1
Update: Influenza Activity in the United States During the 2017-18 Season and Composition of the 2018-19 Influenza Vaccine. Rebecca Garten, Lenee Blanton, Anwar Isa Abd Elal, Noreen Alabi, John Barnes, Matthew Biggerstaff, Lynnette Brammer, Alicia P Budd, Erin Burns, Charisse N Cummings, Todd Davis, Shikha Garg, Larisa Gubareva, Yunho Jang, Krista Kniss, Natalie Kramer, Stephen Lindstrom, Desiree Mustaquim, Alissa O'Halloran, Wendy Sessions, Calli Taylor, Xiyan Xu, Vivien G Dugan, Alicia M Fry, David E Wentworth, Jacqueline Katz, and Daniel Jernigan MMWR. Morbidity and mortality weekly report 2018 Jun (22) 634-642 Similar articles in PubMed DOI:10.15585/mmwr.mm6722a4
Antigenically diverse swine-origin H1N1 variant influenza viruses exhibit differential ferret pathogenesis and transmission phenotypes. Joanna A Pulit-Penaloza, Joyce Jones, Xiangjie Sun, Yunho Jang, Sharmi Thor, Jessica A Belser, Natosha Zanders, Hannah M Creager, Callie Ridenour, Li Wang, Thomas J Stark, Rebecca Garten, Li-Mei Chen, John Barnes, Terrence M Tumpey, David E Wentworth, Taronna R Maines, and C Todd Davis Journal of virology 2018 Mar Similar articles in PubMed DOI:10.1128/JVI.00095-18
A Pyrosequencing-Based Approach to High-Throughput Identification of Influenza A(H3N2) Virus Clades Harboring Antigenic Drift Variants. Vasiliy P Mishin, Tatiana Baranovich, Rebecca Garten, Anton Chesnokov, Anwar I Abd Elal, Michelle Adamczyk, Jennifer LaPlante, Kirsten St George, Alicia M Fry, John Barnes, Stephanie C Chester, Xiyan Xu, Jacqueline M Katz, David E Wentworth, and Larisa V Gubareva Journal of clinical microbiology 2016 Oct Similar articles in PubMed DOI:10.1128/JCM.01840-16
Viral deep sequencing needs an adaptive approach: IRMA, the iterative refinement meta-assembler. Samuel S Shepard, Sarah Meno, Justin Bahl, Malania M Wilson, John Barnes, and Elizabeth Neuhaus BMC genomics 2016 708 Similar articles in PubMed DOI:10.1186/s12864-016-3030-6
Good laboratory practice for clinical next-generation sequencing informatics pipelines. Amy S Gargis, Lisa Kalman, David P Bick, Cristina da Silva, David P Dimmock, Birgit H Funke, Sivakumar Gowrisankar, Madhuri R Hegde, Shashikant Kulkarni, Christopher E Mason, Rakesh Nagarajan, Karl V Voelkerding, Elizabeth A Worthey, Nazneen Aziz, John Barnes, Sarah F Bennett, Himani Bisht, Deanna M Church, Zoya Dimitrova, Shaw R Gargis, Nabil Hafez, Tina Hambuch, Fiona C L Hyland, Ruth Ann Luna, Duncan MacCannell, Tobias Mann, Megan R McCluskey, Timothy K McDaniel, Lilia M Ganova-Raeva, Heidi L Rehm, Jeffrey Reid, David S Campo, Richard B Resnick, Perry G Ridge, Marc L Salit, Pavel Skums, Lee-Jun C Wong, Barbara A Zehnbauer, Justin M Zook, and Ira M Lubin Nature biotechnology 2015 Jul (7) 689-93 Similar articles in PubMed DOI:10.1038/nbt.3237
Oseltamivir-resistant influenza A(H1N1)pdm09 viruses, United States, 2013-14. Margaret Okomo-Adhiambo, Alicia M Fry, Su Su, Ha T Nguyen, Anwar Abd Elal, Elizabeth Negron, Julie Hand, Rebecca J Garten, John Barnes, Xu Xiyan, Julie M Villanueva, Larisa V Gubareva, and Emerging Infect. Dis. 2015 Jan 21(1) 136-41 Similar articles in PubMed DOI:10.3201/eid2101.141006