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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jun 28, 2022. (Total: 3910 publications since 2011)
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Records 1-30 (of 33 Records)
Query Trace: all>>Anastasia P Litvintseva[CDC Author]
MycoSNP: A Portable Workflow for Performing Whole-Genome Sequencing Analysis of Candida auris.
Ujwal R Bagal, John Phan, Rory M Welsh, Elizabeth Misas, Darlene Wagner, Lalitha Gade, Anastasia P Litvintseva, Christina A Cuomo, and Nancy A Chow
Methods in molecular biology (Clifton, N.J.) 2022 2517215-228
Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples.
Luisa F Gómez, Lalitha Gade, Anastasia P Litvintseva, Juan G McEwen, Carlos A Peláez, Myrtha Arango, and María Del P Jiménez
The American journal of tropical medicine and hygiene 2022
Factors Influencing Distribution of Coccidioides immitis in Soil, Washington State, 2016.
Nancy A Chow, David Kangiser, Lalitha Gade, Orion Z McCotter, Steven Hurst, Amy Salamone, Ron Wohrle, Wayne Clifford, Sunkyung Kim, Zainab Salah, Hanna N Oltean, Geoffrey S Plumlee, and Anastasia P Litvintseva
mSphere 2021 e0059821
Genomic Diversity of Azole-Resistant Aspergillus fumigatus in the United States.
Kizee A Etienne, Elizabeth L Berkow, Lalitha Gade, Natalie Nunnally, Shawn R Lockhart, Karlyn Beer, I King Jordan, Lavanya Rishishwar, and Anastasia P Litvintseva
mBio 2021 8 (4) e0180321
Skin Metagenomic Sequence Analysis of Early Candida auris Outbreaks in U.S. Nursing Homes.
Xin Huang, Rory M Welsh, Clay Deming, Diana M Proctor, Pamela J Thomas, , Gabrielle M Gussin, Susan S Huang, Heidi H Kong, Meghan L Bentz, Snigdha Vallabhaneni, Tom Chiller, Brendan R Jackson, Kaitlin Forsberg, Sean Conlan, Anastasia P Litvintseva, and Julia A Segre
mSphere 2021 e0028721
Integrated genomic, epidemiologic investigation of Candida auris skin colonization in a skilled nursing facility.
Diana M Proctor, Thelma Dangana, D Joseph Sexton, Christine Fukuda, Rachel D Yelin, Mary Stanley, Pamela B Bell, Sangeetha Baskaran, Clay Deming, Qiong Chen, Sean Conlan, Morgan Park, , Rory M Welsh, Snigdha Vallabhaneni, Tom Chiller, Kaitlin Forsberg, Stephanie R Black, Massimo Pacilli, Heidi H Kong, Michael Y Lin, Michael E Schoeny, Anastasia P Litvintseva, Julia A Segre, and Mary K Hayden
Nature medicine 2021
Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris.
José F Muñoz, Rory M Welsh, Terrance Shea, Dhwani Batra, Lalitha Gade, Dakota Howard, Lori A Rowe, Jacques F Meis, Anastasia P Litvintseva, and Christina A Cuomo
Genetics 2021
Mitochondrial Genome Sequences of the Emerging Fungal Pathogen Candida auris .
Elizabeth Misas, Nancy A Chow, Oscar M Gómez, José F Muñoz, Juan G McEwen, Anastasia P Litvintseva, and Oliver K Clay
Frontiers in microbiology 2020 11560332
Understanding the Emergence of Multidrug-Resistant Candida : Using Whole-Genome Sequencing to Describe the Population Structure of Candida haemulonii Species Complex.
Lalitha Gade, Jose F Muñoz, Mili Sheth, Darlene Wagner, Elizabeth L Berkow, Kaitlin Forsberg, Brendan R Jackson, Ruben Ramos-Castro, Patricia Escandón, Maribel Dolande, Ronen Ben-Ami, Andrés Espinosa-Bode, Diego H Caceres, Shawn R Lockhart, Christina A Cuomo, and Anastasia P Litvintseva
Frontiers in genetics 2020 11554
Candida auris outbreak involving liver transplant recipients in a Surgical Intensive Care Unit.
Nicole M Theodoropoulos, Barbara Bolstorff, Adel Bozorgzadeh, Christina Brandeburg, Melissa Cumming, Jennifer S Daly, Richard T Ellison, Kaitlin Forsberg, Lalitha Gade, Laura Gibson, Thomas Greenough, Anastasia P Litvintseva, Deborah A Mack, Lawrence Madoff, Paulo N Martins, Eileen McHale, Zita Melvin, Babak Movahedi, Tracy Stiles, Snigdha Vallabhaneni, and Stuart M Levitz
American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons 2020 Jun
Utility of real-time PCR for detection of Exserohilum rostratum in body and tissue fluids during the multistate outbreak of fungal meningitis and other infections.
Lalitha Gade, Dale E Grgurich, Thomas M Kerkering, Mary E Brandt, and Anastasia P Litvintseva
Journal of clinical microbiology 2015 Feb 53(2) 618-25
Detection of fungal DNA in human body fluids and tissues during a multistate outbreak of fungal meningitis and other infections.
Lalitha Gade, Christina M Scheel, Cau D Pham, Mark D Lindsley, Naureen Iqbal, Angela Ahlquist Cleveland, Anne M Whitney, Shawn R Lockhart, Mary E Brandt, and Anastasia P Litvintseva
Eukaryotic cell 2013 May 12(5) 677-83
Use of whole-genome sequencing to detect an outbreak of Malassezia pachydermatis infection and colonization in a neonatal intensive care unit-California, 2015-2016.
Nancy A Chow, Raymond Chinn, Alice Pong, Kerry Schultz, Janice Kim, Lalitha Gade, Brendan R Jackson, Karlyn D Beer, and Anastasia P Litvintseva
Infection control and hospital epidemiology 2020 May 1-3
Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses.
Nancy A Chow, José F Muñoz, Lalitha Gade, Elizabeth L Berkow, Xiao Li, Rory M Welsh, Kaitlin Forsberg, Shawn R Lockhart, Rodney Adam, Alexandre Alanio, Ana Alastruey-Izquierdo, Sahar AlThawadi, Ana Belén Araúz, Ronen Ben-Ami, Amrita Bharat, Belinda Calvo, Marie Desnos-Ollivier, Patricia Escandón, Dianne Gardam, Revathi Gunturu, Christopher H Heath, Oliver Kurzai, Ronny Martin, Anastasia P Litvintseva, and Christina A Cuomo
mBio 2020 Apr (2)
Investigating fungal outbreaks in the 21st century.
Anastasia P Litvintseva, Mary E Brandt, Rajal K Mody, and Shawn R Lockhart
PLoS pathogens 2015 May 11(5) e1004804
Population Structure and Genetic Diversity among Isolates of Coccidioides posadasii in Venezuela and Surrounding Regions.
Marcus M Teixeira, Primavera Alvarado, Chandler C Roe, George R Thompson, José S L Patané, Jason W Sahl, Paul Keim, John N Galgiani, Anastasia P Litvintseva, Daniel R Matute, and Bridget M Barker
mBio 2019 Nov (6)
The detection of Coccidioides from ambient air in Phoenix, Arizona: Evidence of uneven distribution and seasonality.
Lalitha Gade, Orion Z McCotter, Jolene R Bowers, Victor Waddell, Shane Brady, Joseph A Carvajal, Rebecca Sunenshine, Kenneth K Komatsu, David M Engelthaler, Tom Chiller, and Anastasia P Litvintseva
Medical mycology 2019 Sep
Molecular typing of clinical and environmental isolates of Cryptococcus gattii species complex from Southern California, United States.
Steven Hurst, Colleen Lysen, Gail Cooksey, Duc J Vugia, Anastasia P Litvintseva, and Shawn R Lockhart
Mycoses 2019 Aug
On the Origins of a Species: What Might Explain the Rise of Candida auris ?
Brendan R Jackson, Nancy Chow, Kaitlin Forsberg, Anastasia P Litvintseva, Shawn R Lockhart, Rory Welsh, Snigdha Vallabhaneni, and Tom Chiller
Journal of fungi (Basel, Switzerland) 2019 Jul (3)
Simultaneous Emergence of Multidrug-Resistant Candida auris on 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses.
Shawn R Lockhart, Kizee A Etienne, Snigdha Vallabhaneni, Joveria Farooqi, Anuradha Chowdhary, Nelesh P Govender, Arnaldo Lopes Colombo, Belinda Calvo, Christina A Cuomo, Christopher A Desjardins, Elizabeth L Berkow, Mariana Castanheira, Rindidzani E Magobo, Kauser Jabeen, Rana J Asghar, Jacques F Meis, Brendan Jackson, Tom Chiller, and Anastasia P Litvintseva
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2017 Jan 64(2) 134-140
Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species.
José F Muñoz, Lalitha Gade, Nancy A Chow, Vladimir N Loparev, Phalasy Juieng, Elizabeth L Berkow, Rhys A Farrer, Anastasia P Litvintseva, and Christina A Cuomo
Nature communications 2018 9(1) 5346
Utility of Whole-Genome Sequencing to Ascertain Locally Acquired Cases of Coccidioidomycosis, Washington, USA.
Hanna N Oltean, Kizee A Etienne, Chandler C Roe, Lalitha Gade, Orion Z McCotter, David M Engelthaler, and Anastasia P Litvintseva
Emerging infectious diseases 2019 Mar (3) 501-506
Coccidioides ecology and genomics.
Bridget M Barker, Anastasia P Litvintseva, Meritxell Riquelme, and Lluvia Vargas-Gastélum
Medical mycology 2019 Feb (Supplement_1) S21-S29
Multiple introductions and subsequent transmission of multidrug-resistant Candida auris in the USA: a molecular epidemiological survey.
Nancy A Chow, Lalitha Gade, Sharon V Tsay, Kaitlin Forsberg, Jane A Greenko, Karen L Southwick, Patricia M Barrett, Janna L Kerins, Shawn R Lockhart, Tom M Chiller, Anastasia P Litvintseva, and
The Lancet. Infectious diseases 2018 Oct
Molecular epidemiology of Candida auris in Colombia reveals a highly-related, country-wide colonization with regional patterns in Amphotericin B resistance.
Patricia Escandón, Nancy A Chow, Diego H Caceres, Lalitha Gade, Elizabeth L Berkow, Paige Armstrong, Sandra Rivera, Elizabeth Misas, Carolina Duarte, Heather Moulton-Meissner, Rory M Welsh, Claudia Parra, Luz Angela Pescador, Nohora Villalobos, Soraya Salcedo, Indira Berrio, Carmen Varón, Andrés Espinosa-Bode, Shawn R Lockhart, Brendan R Jackson, Anastasia P Litvintseva, Mauricio Beltran, and Tom M Chiller
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 May
Genome Sequence of a Multidrug-Resistant Candida haemulonii Isolate from a Patient with Chronic Leg Ulcers in Israel.
Nancy A Chow, Lalitha Gade, Dhwani Batra, Lori A Rowe, Phalasy Juieng, Ronen Ben-Ami, Vladimir N Loparev, and Anastasia P Litvintseva
Genome announcements 2018 Apr (15)
Genome Sequence of the Amphotericin B-Resistant Candida duobushaemulonii Strain B09383.
Nancy A Chow, Lalitha Gade, Dhwani Batra, Lori A Rowe, Phalasy Juieng, Vladimir N Loparev, and Anastasia P Litvintseva
Genome announcements 2018 Mar (13)
Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans.
Christopher A Desjardins, Charles Giamberardino, Sean M Sykes, Chen-Hsin Yu, Jennifer L Tenor, Yuan Chen, Timothy Yang, Alexander M Jones, Sheng Sun, Miriam R Haverkamp, Joseph Heitman, Anastasia P Litvintseva, John R Perfect, and Christina A Cuomo
Genome research 2017 Jun
Detection of mucormycetes and other pathogenic fungi in formalin fixed paraffin embedded and fresh tissues using the extended region of 28S rDNA.
Lalitha Gade, Steven Hurst, S Arunmozhi Balajee, Shawn R Lockhart, and Anastasia P Litvintseva
Medical mycology 2016 Sep
Molecular detection of airborne Coccidioides in Tucson, Arizona.
Nancy A Chow, Dale W Griffin, Bridget M Barker, Vladimir N Loparev, and Anastasia P Litvintseva
Medical mycology 2016 Aug (6) 584-92
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