CDC-Authored Genomics and Precision Health Publications Database
Last data update: Dec 01, 2023. (Total: 4776 publications since 2011)
| Query Trace: all>>Peter Gerner-Smidt[CDC Author] |
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| PulseNet International Survey on the Implementation of Whole Genome Sequencing in Low and Middle-Income Countries for Foodborne Disease Surveillance.
Davedow T , Carleton H , Kubota K , Palm D , Schroeder M , Gerner-Smidt P , Al-Jardani A , Chinen I , Kam KM , Smith AM , Nadon C . Foodborne Pathog Dis 2022 19 (5) 332-340 |
| The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States.
Stevens EL , Carleton HA , Beal J , Tillman GE , Lindsey RL , Lauer AC , Pightling A , Jarvis KG , Ottesen A , Ramachandran P , Hintz L , Katz LS , Folster JP , Whichard JM , Trees E , Timme RE , McDermott P , Wolpert B , Bazaco M , Zhao S , Lindley S , Bruce BB , Griffin PM , Brown E , Allard M , Tallent S , Irvin K , Hoffmann M , Wise M , Tauxe R , Gerner-Smidt P , Simmons M , Kissler B , Defibaugh-Chavez S , Klimke W , Agarwala R , Lindsay J , Cook K , Austerman SR , Goldman D , McGarry S , Hale KR , Dessai U , Musser SM , Braden C . J Food Prot 2022 85 (5) 755-772 |
| Emergence and global spread of Listeria monocytogenes main clinical clonal complex.
Moura A , Lefrancq N , Wirth T , Leclercq A , Borges V , Gilpin B , Dallman TJ , Frey J , Franz E , Nielsen EM , Thomas J , Pightling A , Howden BP , Tarr CL , Gerner-Smidt P , Cauchemez S , Salje H , Brisse S , Lecuit M . Sci Adv 2021 7 (49) eabj9805 |
| Free-Living Aquatic Turtles as Sentinels of Salmonella spp. for Water Bodies.
Hernandez SM , Maurer JJ , Yabsley MJ , Peters VE , Presotto A , Murray MH , Curry S , Sanchez S , Gerner-Smidt P , Hise K , Huang J , Johnson K , Kwan T , Lipp EK . Front Vet Sci 2021 8 674973 |
| Corrigendum: Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases.
Gerner-Smidt Peter, Besser John, Concepción-Acevedo Jeniffer, Folster Jason P, Huffman Jasmine, Joseph Lavin A, Kucerova Zuzana, Nichols Megin C, Schwensohn Colin A, Tolar Beth. Frontiers in public health 2019 7365 . Frontiers in public health 2019 7365 |
| PulseNet and the Changing Paradigm of Laboratory-Based Surveillance for Foodborne Diseases.
Kubota KA , Wolfgang WJ , Baker DJ , Boxrud D , Turner L , Trees E , Carleton HA , Gerner-Smidt P . Public Health Rep 2019 134 22s-28s |
| Advancing biological hazards risk assessment.
Messens W , Hugas M , Afonso A , Aguilera J , Berendonk TU , Carattoli A , Dhollander S , Gerner-Smidt P , Kriz N , Liebana E , Medlock J , Robinson T , Stella P , Waltner-Toews D , Catchpole M . EFSA J 2019 17 e170714 |
| Whole Genome Sequencing: Bridging One-Health Surveillance of Foodborne Diseases.
Gerner-Smidt P , Besser J , Concepcion-Acevedo J , Folster JP , Huffman J , Joseph LA , Kucerova Z , Nichols MC , Schwensohn CA , Tolar B . Front Public Health 2019 7 172 |
| Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak Investigation.
Besser JM , Carleton HA , Trees E , Stroika SG , Hise K , Wise M , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 504-512 |
| PulseNet: Entering the Age of Next-Generation Sequencing.
Ribot EM , Freeman M , Hise KB , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 451-456 |
| Use of Whole-Genome Sequencing for Food Safety and Public Health in the United States.
Brown E , Dessai U , McGarry S , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 441-450 |
| Metagenomic Approaches for Public Health Surveillance of Foodborne Infections: Opportunities and Challenges.
Carleton HA , Besser J , Williams-Newkirk AJ , Huang A , Trees E , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 474-479 |
| An Overview of PulseNet USA Databases.
Tolar B , Joseph LA , Schroeder MN , Stroika S , Ribot EM , Hise KB , Gerner-Smidt P . Foodborne Pathog Dis 2019 16 (7) 457-462 |
| The use of next generation sequencing for improving food safety: Translation into practice.
Jagadeesan B , Gerner-Smidt P , Allard MW , Leuillet S , Winkler A , Xiao Y , Chaffron S , VanDerVossen J , Tang S , Katase M , McClure P , Kimura B , ChingChai L , Chapman J , Grant K . Food Microbiol 2019 79 96-115 |
| PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance.
Nadon Celine, Van Walle Ivo, Gerner-Smidt Peter, Campos Josefina, Chinen Isabel, Concepcion-Acevedo Jeniffer, Gilpin Brent, Smith Anthony M, Man Kam Kai, Perez Enrique, Trees Eija, Kubota Kristy, Takkinen Johanna, Nielsen Eva Møller, Carleton Heather, .Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2017 Jun (23) . Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2017 Jun (23) |
| Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes.
Moura Alexandra, Criscuolo Alexis, Pouseele Hannes, Maury Mylène M, Leclercq Alexandre, Tarr Cheryl, Björkman Jonas T, Dallman Timothy, Reimer Aleisha, Enouf Vincent, Larsonneur Elise, Carleton Heather, Bracq-Dieye Hélène, Katz Lee S, Jones Louis, Touchon Marie, Tourdjman Mathieu, Walker Matthew, Stroika Steven, Cantinelli Thomas, Chenal-Francisque Viviane, Kucerova Zuzana, Rocha Eduardo P C, Nadon Celine, Grant Kathie, Nielsen Eva M, Pot Bruno, Gerner-Smidt Peter, Lecuit Marc, Brisse Sylvain.Nature microbiology 2016 Oct 16185 . Nature microbiology 2016 Oct 16185 |
| Implementation of Nationwide Real-time Whole-genome Sequencing to Enhance Listeriosis Outbreak Detection and Investigation.
Jackson Brendan R, Tarr Cheryl, Strain Errol, Jackson Kelly A, Conrad Amanda, Carleton Heather, Katz Lee S, Stroika Steven, Gould L Hannah, Mody Rajal K, Silk Benjamin J, Beal Jennifer, Chen Yi, Timme Ruth, Doyle Matthew, Fields Angela, Wise Matthew, Tillman Glenn, Defibaugh-Chavez Stephanie, Kucerova Zuzana, Sabol Ashley, Roache Katie, Trees Eija, Simmons Mustafa, Wasilenko Jamie, Kubota Kristy, Pouseele Hannes, Klimke William, Besser John, Brown Eric, Allard Marc, Gerner-Smidt Peter. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 63(3) 380-6 . Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 63(3) 380-6 |
| Multiple-locus variable-number tandem repeat analysis for strain discrimination of non-O157 Shiga toxin-producing Escherichia coli.
Timmons Chris, Trees Eija, Ribot Efrain M, Gerner-Smidt Peter, LaFon Patti, Im Sung, Ma Li Maria.Journal of microbiological methods 2016 Apr . Journal of microbiological methods 2016 Apr |
| Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25.
Lindsey Rebecca L, Knipe Kristen, Rowe Lori, Garcia-Toledo Lisley, Loparev Vladimir, Juieng Phalasy, Trees Eija, Strockbine Nancy, Stripling Devon, Gerner-Smidt Peter. Genome announcements 2015 3(6) . Genome announcements 2015 3(6) |
| Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7.
Griffing Sean M, MacCannell Duncan R, Schmidtke Amber J, Freeman Molly M, Hyytiä-Trees Eija, Gerner-Smidt Peter, Ribot Efrain M, Bono James L. PLoS ONE 2015 10(7) e0131967 . PLoS ONE 2015 (7) e0131967 |
| Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli Isolates and 12 Isolates Representing Other Diarrheagenic E. coli Pathotypes.
Trees Eija, Strockbine Nancy, Changayil Shankar, Ranganathan Satishkumar, Zhao Kun, Weil Ryan, MacCannell Duncan, Sabol Ashley, Schmidtke Amber, Martin Haley, Stripling Devon, Ribot Efrain M, Gerner-Smidt Peter. Genome Announc 2014 2(4) . Genome Announc 2014 2(4) |
| Draft Whole-Genome Sequences of Nine Non-O157 Shiga Toxin-Producing Escherichia coli Strains.
Lindsey Rebecca L, Trees Eija, Sammons Scott, Loparev Vladimir, Frace Mike, Strockbine Nancy, Sabol Ashley L, Sowers Evan, Stripling Devon, Martin Haley, Knipe Kristen, Rowe Lori, Gerner-Smidt Peter. Genome Announc 2014 2(4) . Genome Announc 2014 2(4) |
| Genomic characterization of Listeria monocytogenes strains involved in a multistate listeriosis outbreak associated with cantaloupe in US.
Laksanalamai Pongpan, Joseph Lavin A, Silk Benjamin J, Burall Laurel S, L Tarr Cheryl, Gerner-Smidt Peter, Datta Atin R. PLoS ONE 2012 7(7) e42448 . PLoS ONE 2012 7(7) e42448 |
| Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa.
Reimer Aleisha R, Van Domselaar Gary, Stroika Steven, Walker Matthew, Kent Heather, Tarr Cheryl, Talkington Deborah, Rowe Lori, Olsen-Rasmussen Melissa, Frace Michael, Sammons Scott, Dahourou Georges Anicet, Boncy Jacques, Smith Anthony M, Mabon Philip, Petkau Aaron, Graham Morag, Gilmour Matthew W, Gerner-Smidt Peter, . Emerging Infect. Dis. 2011 Nov 17(11) 2113-21 . Emerging Infect. Dis. 2011 Nov 17(11) 2113-21 |
| Characterization of toxigenic Vibrio cholerae from Haiti, 2010-2011.
Talkington Deborah, Bopp Cheryl, Tarr Cheryl, Parsons Michele B, Dahourou Georges, Freeman Molly, Joyce Kevin, Turnsek Maryann, Garrett Nancy, Humphrys Michael, Gomez Gerardo, Stroika Steven, Boncy Jacques, Ochieng Benjamin, Oundo Joseph, Klena John, Smith Anthony, Keddy Karen, Gerner-Smidt Peter. Emerging Infect. Dis. 2011 Nov 17(11) 2122-9 . Emerging Infect. Dis. 2011 Nov 17(11) 2122-9 |
| Subtyping Salmonella enterica serovar enteritidis isolates from different sources by using sequence typing based on virulence genes and clustered regularly interspaced short palindromic repeats (CRISPRs).
Liu Fenyun, Kariyawasam Subhashinie, Jayarao Bhushan M, Barrangou Rodolphe, Gerner-Smidt Peter, Ribot Efrain M, Knabel Stephen J, Dudley Edward G. Appl. Environ. Microbiol. 2011 Jul 77(13) 4520-6 . Appl. Environ. Microbiol. 2011 Jul 77(13) 4520-6 |
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- Page last updated:Dec 01, 2023
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