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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Feb 01, 2023. (Total: 4188 publications since 2011)
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Records 1-30 (of 34 Records)
Query Trace: all>>Brian H Raphael[CDC Author]
Phylogenomic Comparison of Neisseria gonorrhoeae Causing Disseminated Gonococcal Infections and Uncomplicated Gonorrhea in Georgia, United States.
John C Cartee, Sandeep J Joseph, Emily Weston, Cau D Pham, Jesse C Thomas, Karen Schlanger, Sancta B St Cyr, Monica M Farley, Ashley E Moore, Amy K Tunali, Charletta Cloud, and Brian H Raphael
Open forum infectious diseases 2022 9(7) ofac247
Characterization of a Neisseria gonorrhoeae Ciprofloxacin panel for an antimicrobial resistant Isolate Bank.
Hsi Liu, Kevin Tang, Cau D Pham, Matthew Schmerer, Ellen N Kersh, and Brian H Raphael
PloS one 2022 17(3) e0264149
Chlamydia trachomatis variants escaping detection in the Aptima Combo 2® assay in the United States.
Samantha S Katz, Damien C Danavall, Monica R Morris, Bridgett P Herrod, Suzanne E Dale, Melinda B Nye, Ellen N Kersh, Robert D Kirkcaldy, and Brian H Raphael
Sexually transmitted diseases 2022
Global emergence and dissemination of Neisseria gonorrhoeae ST-9363 isolates with reduced susceptibility to azithromycin.
Sandeep J Joseph, Jesse C Thomas Iv, Matthew W Schmerer, Jack Cartee, Sancta St Cyr, Karen Schlanger, Ellen N Kersh, Brian H Raphael, Kim M Gernert, and
Genome biology and evolution 2021
Use of real-time PCR as an alternative to conventional genotyping methods for the laboratory detection of lymphogranuloma venereum (LGV).
Evonne N Woodson, Samantha S Katz, Sheree S Mosley, Damien C Danavall, Katherine E Bowden, Kai-Hua Chi, and Brian H Raphael
Diagnostic microbiology and infectious disease 2021 101(4) 115532
Exploring and comparing the structure of sexual networks affected by Neisseria gonorrhoeae using sexual partner services investigation and genomic data.
Katy Town, Emily R Learner, Vasanta L Chivukula, Kerry Mauk, Jennifer L Reimche, Matthew W Schmerer, Jamie Black, Preeti Pathela, Sanjib Bhattacharyya, Roxanne P Kerani, Karen E Gieseker, Acasia Fukuda, Madeline Sankaran, Candice J McNeil, Ian H Spicknall, Brian H Raphael, Sancta B St Cyr, Kyle Bernstein, Ellen N Kersh, Robert D Kirkcaldy, Karen Schlanger, Kim M Gernert, and
Sexually transmitted diseases 2021
Phylogenomic analysis reveals persistence of gonococcal strains with reduced-susceptibility to extended-spectrum cephalosporins and mosaic penA-34.
Jesse C Thomas, Sandeep J Joseph, John C Cartee, Cau D Pham, Matthew W Schmerer, Karen Schlanger, Sancta B St Cyr, Ellen N Kersh, Brian H Raphael, and
Nature communications 2021 12(1) 3801
Genomic analysis of the predominant strains and antimicrobial resistance determinants within 1479 Neisseria gonorrhoeae isolates from the U.S. Gonococcal Isolate Surveillance Project in 2018.
Jennifer L Reimche, Vasanta L Chivukula, Matthew W Schmerer, Sandeep J Joseph, Cau D Pham, Karen Schlanger, Sancta B St Cyr, Hillard S Weinstock, Brian H Raphael, Ellen N Kersh, Kim M Gernert, and
Sexually transmitted diseases 2021
A community-driven resource for genomic epidemiology and antimicrobial resistance prediction of Neisseria gonorrhoeae at Pathogenwatch.
Leonor Sánchez-Busó, Corin A Yeats, Benjamin Taylor, Richard J Goater, Anthony Underwood, Khalil Abudahab, Silvia Argimón, Kevin C Ma, Tatum D Mortimer, Daniel Golparian, Michelle J Cole, Yonatan H Grad, Irene Martin, Brian H Raphael, William M Shafer, Katy Town, Teodora Wi, Simon R Harris, Magnus Unemo, and David M Aanensen
Genome medicine 2021 13(1) 61
Whole-Genome Enrichment and Sequencing of Chlamydia trachomatis Directly from Patient Clinical Vaginal and Rectal Swabs.
Katherine E Bowden, Sandeep J Joseph, John C Cartee, Noa Ziklo, Damien Danavall, Brian H Raphael, Timothy D Read, and Deborah Dean
mSphere 2021 6(2)
Atypical Mutation in Neisseria gonorrhoeae 23S rRNA Associated with High-Level Azithromycin Resistance.
Cau D Pham, Evelyn Nash, Hsi Liu, Matthew W Schmerer, Samera Sharpe, Grace Woods, Brad Roland, Karen Schlanger, Sancta B St Cyr, Jonathan Carlson, Kevin Sellers, Aaron Olsen, Ruth Sanon, Henrietta Hardin, Olusegun O Soge, Brian H Raphael, Ellen N Kersh, and
Antimicrobial agents and chemotherapy 2020 Nov
Azithromycin susceptibility of Neisseria gonorrhoeae in the USA in 2017: a genomic analysis of surveillance data.
Kim M Gernert, Sandra Seby, Matthew W Schmerer, Jesse C Thomas, Cau D Pham, Sancta St Cyr, Karen Schlanger, Hillard Weinstock, William M Shafer, Brian H Raphael, Ellen N Kersh, and
The Lancet. Microbe 2020 Aug 1(4) e154-e164
Notes from the Field: Ongoing Cluster of Highly Related Disseminated Gonococcal Infections - Southwest Michigan, 2019.
William D Nettleton, James B Kent, Kathryn Macomber, Mary-Grace Brandt, Kelly Jones, Alison D Ridpath, Brian H Raphael, and Eden V Wells
MMWR. Morbidity and mortality weekly report 2020 69(12) 353-354
Expanding US Laboratory Capacity for Neisseria gonorrhoeae Antimicrobial Susceptibility Testing and Whole Genome Sequencing through CDC's Antibiotic Resistance Laboratory Network.
Ellen N Kersh, Cau D Pham, John R Papp, Robert Myers, Richard Steece, Grace Kubin, Romesh Gautom, Evelyn E Nash, Samera Sharpe, Kim M Gernert, Matthew Schmerer, Brian H Raphael, Tara Henning, Anne M Gaynor, Olusegun Soge, Karen Schlanger, Robert D Kirkcaldy, Sancta B St Cyr, Elizabeth A Torrone, Kyle Bernstein, Hillard Weinstock, and
Journal of clinical microbiology 2020 Feb
Culture of Clinical Specimens Reveals Extensive Diversity of Legionella pneumophila Strains in Arizona.
Brian H Raphael, Trung Huynh, Ellen Brown, Jessica C Smith, Irene Ruberto, Linda Getsinger, Stacy White, and Jonas M Winchell
mSphere 2019 Feb 4(1)
Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1.
Jeffrey W Mercante, Jason A Caravas, Maliha K Ishaq, Natalia A Kozak-Muiznieks, Brian H Raphael, and Jonas M Winchell
PloS one 2018 13(10) e0206110
Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies.
Natalia A Kozak-Muiznieks, Shatavia S Morrison, Jeffrey W Mercante, Maliha K Ishaq, Taccara Johnson, Jason Caravas, Claressa E Lucas, Ellen Brown, Brian H Raphael, and Jonas M Winchell
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2018 Feb
Legionnaires' Disease Outbreak Caused by Endemic Strain of Legionella pneumophila, New York, New York, USA, 2015.
Pascal Lapierre, Elizabeth Nazarian, Yan Zhu, Danielle Wroblewski, Amy Saylors, Teresa Passaretti, Scott Hughes, Anthony Tran, Ying Lin, John Kornblum, Shatavia S Morrison, Jeffrey W Mercante, Robert Fitzhenry, Don Weiss, Brian H Raphael, Jay K Varma, Howard A Zucker, Jennifer L Rakeman, and Kimberlee A Musser
Emerging infectious diseases 2017 Nov (11) 1784-1791
Characterization of Legionella Species from Watersheds in British Columbia, Canada.
Michael A Peabody, Jason A Caravas, Shatavia S Morrison, Jeffrey W Mercante, Natalie A Prystajecky, Brian H Raphael, and Fiona S L Brinkman
mSphere (4)
Complete Genome Sequences of Legionella pneumophila subsp. fraseri Strains Detroit-1 and Dallas 1E.
Brian H Raphael, Natalia A Kozak-Muiznieks, Shatavia S Morrison, Jeffrey W Mercante, and Jonas M Winchell
Genome announcements 2017 Feb (5)
Genomic Analysis Reveals Novel Diversity among the 1976 Philadelphia Legionnaires' Disease Outbreak Isolates and Additional ST36 Strains.
Jeffrey W Mercante, Shatavia S Morrison, Heta P Desai, Brian H Raphael, and Jonas M Winchell
PloS one 11(9) e0164074
Complete Genome Sequences of the Historical Legionella pneumophila Strains OLDA and Pontiac.
Jeffrey W Mercante, Shatavia S Morrison, Brian H Raphael, and Jonas M Winchell
Genome announcements 2016 (4)
Complete Genome Sequences of Three Outbreak-Associated Legionella pneumophila Isolates.
Shatavia S Morrison, Heta P Desai, Jeffrey W Mercante, Pascal Lapierre, Brian H Raphael, Kimberlee Musser, and Jonas M Winchell
Genome announcements 2016 (4)
Three Genome Sequences of Legionella pneumophila subsp. pascullei Associated with Colonization of a Health Care Facility.
Natalia A Kozak-Muiznieks, Shatavia S Morrison, Scott Sammons, Lori A Rowe, Mili Sheth, Michael Frace, Claressa E Lucas, Vladimir N Loparev, Brian H Raphael, and Jonas M Winchell
Genome announcements 2016 (3)
Genomic resolution of outbreak-associated Legionella pneumophila serogroup 1 isolates from New York State.
Brian H Raphael, Deborah J Baker, Elizabeth Nazarian, Pascal Lapierre, Dianna Bopp, Natalia A Kozak-Muiznieks, Shatavia S Morrison, Claressa E Lucas, Jeffrey W Mercante, Kimberlee A Musser, and Jonas M Winchell
Applied and environmental microbiology 2016 Apr
Characterizing the fecal microbiota of infants with botulism.
T Brian Shirey, Janet K Dykes, Carolina Lúquez, Susan E Maslanka, and Brian H Raphael
Microbiome 2015 (1) 54
A Novel Botulinum Toxin, Previously Reported as Serotype H, has a Hybrid Structure of Known Serotypes A and F that is Neutralized with Serotype A Antitoxin.
Susan E Maslanka, Carolina Lúquez, Janet K Dykes, William H Tepp, Christina L Pier, Sabine Pellett, Brian H Raphael, Suzanne R Kalb, John R Barr, Agam Rao, and Eric A Johnson
J. Infect. Dis. 2015 Jun 10.
Genome-based discrimination between Group I Clostridium botulinum and Clostridium sporogenes strains: implications for bacterial taxonomy.
Michael R Weigand, Angela Pena-Gonzalez, Timothy B Shirey, Robin G Broeker, Maliha K Ishaq, Konstantinos T Konstantinidis, and Brian H Raphael
Appl. Environ. Microbiol. 2015 Jun 5.
Historical and current perspectives on Clostridium botulinum diversity.
Theresa J Smith, Karen K Hill, and Brian H Raphael
Res. Microbiol. 2015 May 166(4) 290-302
Identification and genetic characterization of Clostridium botulinum serotype A strains from commercially pasteurized carrot juice.
Kristin M Marshall, Louis Nowaczyk, Brian H Raphael, Guy E Skinner, and N Rukma Reddy
Food Microbiol. 2014 Dec 44149-55
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