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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jun 28, 2022. (Total: 3910 publications since 2011)
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Records 1-15 (of 15 Records)
Query Trace: all>>Rachel L Marine[CDC Author]
VPipe: an Automated Bioinformatics Platform for Assembly and Management of Viral Next-Generation Sequencing Data.
Darlene D Wagner, Rachel L Marine, Edward Ramos, Terry Fei Fan Ng, Christina J Castro, Margaret Okomo-Adhiambo, Krysten Harvey, Gregory Doho, Reagan Kelly, Yatish Jain, Roman L Tatusov, Hideky Silva, Paul A Rota, Agha N Khan, and M Steven Oberste
Microbiology spectrum 2022 e0256421
Next-Generation Sequencing of Human Respiratory Syncytial Virus Subgroups A and B Genomes.
Lijuan Wang, Terry Fei Fan Ng, Christina J Castro, Rachel L Marine, Laura C Magaña, Mathew Esona, Teresa C T Peret, and Natalie J Thornburg
Journal of virological methods 2021 114335
The effect of variant interference on de novo assembly for viral deep sequencing.
Christina J Castro, Rachel L Marine, Edward Ramos, and Terry Fei Fan Ng
BMC genomics 2020 Jun 21(1) 421
Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses.
Rachel L Marine, Laura C Magaña, Christina J Castro, Kun Zhao, Anna M Montmayeur, Alexander Schmidt, Marta Diez-Valcarce, Terry Fei Fan Ng, Jan Vinjé, Cara C Burns, W Allan Nix, Paul A Rota, and M Steven Oberste
Journal of virological methods 2020 Apr 113865
Nearly Complete Genome Sequence of an Echovirus 30 Strain from a Cluster of Aseptic Meningitis Cases in California, September 2017.
Chao-Yang Pan, Thalia Huynh, Tasha Padilla, Alice Chen, Terry Fei Fan Ng, Rachel L Marine, Christina J Castro, W Allan Nix, and Debra A Wadford
Microbiology resource announcements 2019 Oct (44)
Pan-viral serology implicates enteroviruses in acute flaccid myelitis.
Ryan D Schubert, Isobel A Hawes, Prashanth S Ramachandran, Akshaya Ramesh, Emily D Crawford, John E Pak, Wesley Wu, Carly K Cheung, Brian D O'Donovan, Cristina M Tato, Amy Lyden, Michelle Tan, Rene Sit, Gavin A Sowa, Hannah A Sample, Kelsey C Zorn, Debarko Banerji, Lillian M Khan, Riley Bove, Stephen L Hauser, Amy A Gelfand, Bethany L Johnson-Kerner, Kendall Nash, Kalpathy S Krishnamoorthy, Tanuja Chitnis, Joy Z Ding, Hugh J McMillan, Charles Y Chiu, Benjamin Briggs, Carol A Glaser, Cynthia Yen, Victoria Chu, Debra A Wadford, Samuel R Dominguez, Terry Fei Fan Ng, Rachel L Marine, Adriana S Lopez, W Allan Nix, Ariane Soldatos, Mark P Gorman, Leslie Benson, Kevin Messacar, Jennifer L Konopka-Anstadt, M Steven Oberste, Joseph L DeRisi, and Michael R Wilson
Nature medicine 2019 Oct
Antibodies to Enteroviruses in Cerebrospinal Fluid of Patients with Acute Flaccid Myelitis.
Nischay Mishra, Terry Fei Fan Ng, Rachel L Marine, Komal Jain, James Ng, Riddhi Thakkar, Adrian Caciula, Adam Price, Joel A Garcia, Jane C Burns, Kiran T Thakur, Kimbell L Hetzler, Janell A Routh, Jennifer L Konopka-Anstadt, W Allan Nix, Rafal Tokarz, Thomas Briese, M Steven Oberste, and W Ian Lipkin
mBio 2019 Aug (4)
Complete Genome Sequences of Human Astrovirus Prototype Strains (Types 1 to 8).
Christina J Castro, Emily Reynolds, Stephan S Monroe, Rachel L Marine, and Jan Vinjé
Microbiology resource announcements 2019 Feb (7)
Strengthening laboratory surveillance of viral pathogens: Experiences and lessons learned building next-generation sequencing capacity in Ghana.
Rachel L Marine, Nana Afia Asante Ntim, Christina J Castro, Keren O Attiku, Deborah Pratt, Ewurabena Duker, Esinam Agbosu, Terry Fei Fan Ng, Wangeci Gatei, Evangeline Obodai, John Kofi Odoom, Chastity L Walker, Paul A Rota, M Steven Oberste, William Kwabena Ampofo, and S Arunmozhi Balajee
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2019 Feb
Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017.
Chao-Yang Pan, Shigeo Yagi, Tasha Padilla, Terry Fei Fan Ng, Rachel L Marine, W Allan Nix, and Debra A Wadford
Microbiology resource announcements 2018 (7)
Genetic diversity of human sapovirus across the Americas.
Marta Diez-Valcarce, Christina J Castro, Rachel L Marine, Natasha Halasa, Holger Mayta, Mayuko Saito, Laura Tsaknaridis, Chao-Yang Pan, Filemon Bucardo, Sylvia Becker-Dreps, Maria Renee Lopez, Laura Cristal Magaña, Terry Fei Fan Ng, and Jan Vinjé
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2018 May 65-72
Near-Complete Genome Sequences of Several New Norovirus Genogroup II Genotypes.
Preeti Chhabra, Kshama Aswath, Nikail Collins, Tahmeed Ahmed, Maribel Paredes Olórtegui, Margaret Kosek, Elizabeth Cebelinski, Phil J Cooper, Filemon Bucardo, Maria Renee Lopez, Christina J Castro, Rachel L Marine, Terry Fei Fan Ng, and Jan Vinjé
Genome announcements 2018 Feb 6(6)
Whole-Genome Sequence of Human Rhinovirus C47, Isolated from an Adult Respiratory Illness Outbreak in Butte County, California, 2017.
Chao-Yang Pan, Tasha Padilla, Shigeo Yagi, Linda S Lewis, Terry Fei Fan Ng, Rachel L Marine, William Allan Nix, and Debra A Wadford
Genome announcements 2018 Feb (5)
Complete Genome Sequences of Mumps and Measles Virus Isolates from Three States in the United States.
Laura C Magaña, Alex Espinosa, Rachel L Marine, Terry Fei Fan Ng, Christina J Castro, Anna M Montmayeur, Jill K Hacker, Samantha Scott, Thomas Whyte, Bettina Bankamp, M Steven Oberste, and Paul A Rota
Genome announcements 2017 Aug (33)
Genetic and Epidemiologic Trends of Norovirus Outbreaks in the US Demonstrated Emergence of Novel GII.4 Recombinant Viruses, 2013-2016.
Jennifer L Cannon, Leslie Barclay, Nikail R Collins, Mary E Wikswo, Christina J Castro, Laura Cristal Magaña, Nicole Gregoricus, Rachel L Marine, Preeti Chhabra, and Jan Vinjé
Journal of clinical microbiology 2017 May
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