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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Aug 10, 2022. (Total: 3965 publications since 2011)
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Records 1-17 (of 17 Records)
Query Trace: all>>Benjamin J Metcalf[CDC Author]
Continued Increase of Erythromycin- and Clindamycin-Nonsusceptibility among Invasive Group A Streptococci Driven by Genomic Clusters, USA, 2018-2019.
Yuan Li, Joy Rivers, Saundra Mathis, Zhongya Li, Lesley McGee, Sopio Chochua, Benjamin J Metcalf, Katherine E Fleming-Dutra, Srinivas A Nanduri, and Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022
Genomic Characterization of Group A Streptococci Causing Pharyngitis and Invasive Disease in Colorado, USA, June 2016 - April 2017.
Yuan Li, Samuel Dominguez, Srinivas A Nanduri, Joy Rivers, Saundra Mathis, Zhongya Li, Lesley McGee, Sopio Chochua, Benjamin J Metcalf, Chris A Van Beneden, Bernard Beall, and Lisa Miller
The Journal of infectious diseases 2021
Genomic Surveillance of Streptococcus pyogenes Strains Causing Invasive Disease, United States, 2016-2017.
Yuan Li, Joy Rivers, Saundra Mathis, Zhongya Li, Srinivasan Velusamy, Srinivas A Nanduri, Chris A Van Beneden, Paula Snippes-Vagnone, Ruth Lynfield, Lesley McGee, Sopio Chochua, Benjamin J Metcalf, and Bernard Beall
Frontiers in microbiology 2020 111547
Low but Increasing Prevalence of Reduced Beta-lactam Susceptibility Among Invasive Group B Streptococcal Isolates, US Population-Based Surveillance, 1998-2018.
Miwako Kobayashi, Lesley McGee, Sopio Chochua, Mirasol Apostol, Nisha B Alden, Monica M Farley, Lee H Harrison, Ruth Lynfield, Paula Snippes Vagnone, Chad Smelser, Alison Muse, Ann R Thomas, Li Deng, Benjamin J Metcalf, Bernard W Beall, and Stephanie J Schrag
Open forum infectious diseases 2021 Feb 8(2) ofaa634
Invasive pneumococcal strain distributions and isolate clusters associated with persons experiencing homelessness during 2018.
Benjamin J Metcalf, Sopio Chochua, Hollis Walker, Theresa Tran, Zhongya Li, Jasmine Varghese, Paula M Snippes Vagnone, Ruth Lynfield, Lesley McGee, Yuan Li, Tamara Pilishvili, and Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Nov
Upsurge of conjugate vaccine serotype 4 invasive pneumococcal disease clusters among adults experiencing homelessness in California, Colorado, and New Mexico.
Bernard Beall, Hollis Walker, Theresa Tran, Zhongya Li, Jasmine Varghese, Lesley McGee, Yuan Li, Benjamin J Metcalf, Ryan Gierke, Emily Mosites, Sopio Chochua, and Tamara Pilishvili
The Journal of infectious diseases 2020 Aug
Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates.
Rebecca A Gladstone, Stephanie W Lo, Richard Goater, Corin Yeats, Ben Taylor, James Hadfield, John A Lees, Nicholas J Croucher, Andries J van Tonder, Leon J Bentley, Fu Xiang Quah, Anne J Blaschke, Nicole L Pershing, Carrie L Byington, Veeraraghavan Balaji, Waleria Hryniewicz, Betuel Sigauque, K L Ravikumar, Samanta Cristine Grassi Almeida, Theresa J Ochoa, Pak Leung Ho, Mignon du Plessis, Kedibone M Ndlangisa, Jennifer E Cornick, Brenda Kwambana-Adams, Rachel Benisty, Susan A Nzenze, Shabir A Madhi, Paulina A Hawkins, Andrew J Pollard, Dean B Everett, Martin Antonio, Ron Dagan, Keith P Klugman, Anne von Gottberg, Benjamin J Metcalf, Yuan Li, Bernard W Beall, Lesley McGee, Robert F Breiman, David M Aanensen, Stephen D Bentley, and The Global Pneumococcal Sequencing Consortium
Microbial genomics 2020 Apr
A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa.
Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, Mignon du Plessis, Jennifer E Cornick, Paulina A Hawkins, Shabir A Madhi, Susan A Nzenze, Rama Kandasamy, K L Ravikumar, Naima Elmdaghri, Brenda Kwambana-Adams, Samanta Cristine Grassi Almeida, Anna Skoczynska, Ekaterina Egorova, Leonid Titov, Samir K Saha, Metka Paragi, Dean B Everett, Martin Antonio, Keith P Klugman, Yuan Li, Benjamin J Metcalf, Bernard Beall, Lesley McGee, Robert F Breiman, Stephen D Bentley, Anne von Gottberg, and
The Journal of antimicrobial chemotherapy 2019 Dec
Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018.
Sopio Chochua, Joy Rivers, Saundra Mathis, Zhongya Li, Srinivasan Velusamy, Lesley McGee, Chris Van Beneden, Yuan Li, Benjamin J Metcalf, and Bernard Beall
Emerging infectious diseases 2019 Aug (8)
Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis.
Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Hollis Walker, Theresa Tran, Paulina A Hawkins, Ryan Gierke, Tamara Pilishvili, Lesley McGee, and Bernard W Beall
Nature communications 2019 Jan (1) 178
A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016.
Bernard Beall, Sopio Chochua, Robert E Gertz, Yuan Li, Zhongya Li, Lesley McGee, Benjamin J Metcalf, Jessica Ricaldi, Theresa Tran, Hollis Walker, and Tamara Pilishvili
Frontiers in microbiology 2018 92670
Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci.
Taj Azarian, Patrick K Mitchell, Maria Georgieva, Claudette M Thompson, Amel Ghouila, Andrew J Pollard, Anne von Gottberg, Mignon du Plessis, Martin Antonio, Brenda A Kwambana-Adams, Stuart C Clarke, Dean Everett, Jennifer Cornick, Ewa Sadowy, Waleria Hryniewicz, Anna Skoczynska, Jennifer C Moïsi, Lesley McGee, Bernard Beall, Benjamin J Metcalf, Robert F Breiman, P L Ho, Raymond Reid, Katherine L O'Brien, Rebecca A Gladstone, Stephen D Bentley, and William P Hanage
PLoS pathogens 2018 Nov 14(11) e1007438
Validation of ß-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences.
Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Robert E Gertz, Hollis Walker, Paulina A Hawkins, Theresa Tran, Lesley McGee, Bernard W Beall, and
BMC genomics 2017 Aug (1) 621
Key features of invasive pneumococcal isolates recovered in Lima, Peru determined through whole genome sequencing.
Paulina Hawkins, Erik Mercado, Sopio Chochua, Maria E Castillo, Isabel Reyes, Eduardo Chaparro, Rebecca Gladstone, Stephen D Bentley, Robert F Breiman, Benjamin J Metcalf, Bernard Beall, Theresa J Ochoa, and Lesley McGee
International journal of medical microbiology : IJMM 2017 Jul
Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015-2016.
Sopio Chochua, Benjamin J Metcalf, Zhongya Li, Hollis Walker, Theresa Tran, Lesley McGee, and Bernard Beall
Emerging infectious diseases 2017 06 (6) 922-930
Cross-resistance to lincosamides, streptogramins A and pleuromutilins in Streptococcus agalactiae isolates from the USA.
Paulina A Hawkins, Caitlin S Law, Benjamin J Metcalf, Sopio Chochua, Delois M Jackson, Lars F Westblade, Robert Jerris, Bernard W Beall, and Lesley McGee
The Journal of antimicrobial chemotherapy 2017 Mar
Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting ß-Lactam Resistance Levels in Streptococcus pneumoniae.
Yuan Li, Benjamin J Metcalf, Sopio Chochua, Zhongya Li, Robert E Gertz, Hollis Walker, Paulina A Hawkins, Theresa Tran, Cynthia G Whitney, Lesley McGee, and Bernard W Beall
mBio 2016 7(3)
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