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Public Health Genomics and Precision Health Knowledge Base (v8.2)
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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB
CDC-Authored Genomics and Precision Health Publications Database
Last data update: Feb 01, 2023
. (Total: 4188 publications since 2011)
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CDC Author
Year
Journal
Records 1-26 (of 26 Records)
Query Trace:
all>>Sopio Chochua[CDC Author]
Invasive Group A Streptococcal Penicillin Binding Protein 2× Variants Associated with Reduced Susceptibility to β-Lactam Antibiotics in the United States, 2015-2021.
Sopio Chochua
,
Benjamin Metcalf
, Zhongya Li, Saundra Mathis, Theresa Tran,
Joy Rivers
,
Katherine E Fleming-Dutra
,
Yuan Li
,
Lesley McGee
, and
Bernard Beall
Antimicrobial agents and chemotherapy 2022 e0080222
Similar articles in PubMed
DOI:
10.1128/aac.00802-22
Simultaneous Late, Late-Onset Group B Streptococcal Meningitis in Identical Twins.
Gilad Sherman, Gabriella S Lamb, Craig D Platt, Michael R Wessels,
Sopio Chochua
, and Mari M Nakamura
Clinical pediatrics 2022 99228221113630
Similar articles in PubMed
DOI:
10.1177/00099228221113630
Continued Increase of Erythromycin- and Clindamycin-Nonsusceptibility among Invasive Group A Streptococci Driven by Genomic Clusters, USA, 2018-2019.
Yuan Li
,
Joy Rivers
,
Saundra Mathis
,
Zhongya Li
,
Lesley McGee
,
Sopio Chochua
,
Benjamin J Metcalf
,
Katherine E Fleming-Dutra
,
Srinivas A Nanduri
, and
Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022
Similar articles in PubMed
DOI:
10.1093/cid/ciac468
Cluster Transmission Drives Invasive Group A Streptococcus Disease Within the US and is Focused on Communities Experiencing Disadvantage.
Benjamin Metcalf
,
Srinivas Nanduri
,
Sopio Chochua
,
Yuan Li
,
Katherine Fleming-Dutra
,
Lesley McGee
, and
Bernard Beall
The Journal of infectious diseases 2022
Similar articles in PubMed
DOI:
10.1093/infdis/jiac162
Invasive pneumococcal disease clusters disproportionally impact persons experiencing homelessness, injecting drug users, and the western United States.
Bernard Beall
,
Sopio Chochua
, Zhongya Li, Theresa Tran, Jasmine Varghese,
Lesley McGee
,
Yuan Li
, and
Benjamin Metcalf
The Journal of infectious diseases 2022
Similar articles in PubMed
DOI:
10.1093/infdis/jiac058
Genomic Characterization of Group A Streptococci Causing Pharyngitis and Invasive Disease in Colorado, USA, June 2016 - April 2017.
Yuan Li
, Samuel Dominguez,
Srinivas A Nanduri
,
Joy Rivers
,
Saundra Mathis
,
Zhongya Li
,
Lesley McGee
,
Sopio Chochua
,
Benjamin J Metcalf
,
Chris A Van Beneden
,
Bernard Beall
, and Lisa Miller
The Journal of infectious diseases 2021
Similar articles in PubMed
DOI:
10.1093/infdis/jiab565
Patterns of antibiotic nonsusceptibility among invasive group A Streptococcus infections-United States, 2006-2017.
Katherine Fay
,
Jennifer Onukwube
,
Sopio Chochua
, William Schaffner, Paul Cieslak, Ruth Lynfield, Alison Muse, Chad Smelser, Lee H Harrison, Monica Farley, Susan Petit, Nisha Alden, Mirasol Apostal, Paula Snippes Vagnone,
Srinivas Nanduri
,
Bernard Beall
, and
Chris A Van Beneden
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021
Similar articles in PubMed
DOI:
10.1093/cid/ciab575
Low but Increasing Prevalence of Reduced Beta-lactam Susceptibility Among Invasive Group B Streptococcal Isolates, US Population-Based Surveillance, 1998-2018.
Miwako Kobayashi
,
Lesley McGee
,
Sopio Chochua
, Mirasol Apostol, Nisha B Alden, Monica M Farley, Lee H Harrison, Ruth Lynfield, Paula Snippes Vagnone, Chad Smelser, Alison Muse, Ann R Thomas,
Li Deng
,
Benjamin J Metcalf
,
Bernard W Beall
, and
Stephanie J Schrag
Open forum infectious diseases 2021 Feb 8(2) ofaa634
Similar articles in PubMed
DOI:
10.1093/ofid/ofaa634
Invasive pneumococcal strain distributions and isolate clusters associated with persons experiencing homelessness during 2018.
Benjamin J Metcalf
,
Sopio Chochua
, Hollis Walker, Theresa Tran, Zhongya Li, Jasmine Varghese, Paula M Snippes Vagnone, Ruth Lynfield,
Lesley McGee
,
Yuan Li
,
Tamara Pilishvili
, and
Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Nov
Similar articles in PubMed
DOI:
10.1093/cid/ciaa1680
Sequential quadriplex real-time PCR for identifying 20 common emm types of Group A Streptococcus .
Srinivasan Velusamy
, Katherine Jordak, Madeline Kupor,
Sopio Chochua
,
Lesley McGee
, and
Bernard Beall
Journal of clinical microbiology 2020 Oct
Similar articles in PubMed
DOI:
10.1128/JCM.01764-20
Genomic Surveillance of Streptococcus pyogenes Strains Causing Invasive Disease, United States, 2016-2017.
Yuan Li
,
Joy Rivers
,
Saundra Mathis
,
Zhongya Li
,
Srinivasan Velusamy
,
Srinivas A Nanduri
,
Chris A Van Beneden
, Paula Snippes-Vagnone, Ruth Lynfield,
Lesley McGee
,
Sopio Chochua
,
Benjamin J Metcalf
, and
Bernard Beall
Frontiers in microbiology 2020 111547
Similar articles in PubMed
DOI:
10.3389/fmicb.2020.01547
Multistate, population-based distributions of candidate vaccine targets, clonal complexes, and resistance features of invasive Group B Streptococci within the US: 2015-2017.
Lesley McGee
,
Sopio Chochua
, Zhongya Li, Saundra Mathis,
Joy Rivers
,
Benjamin Metcalf
, Alison Ryan, Nisha Alden, Monica M Farley, Lee H Harrison, Paula Snippes Vagnone, Ruth Lynfield, Chad Smelser, Alison Muse, Ann R Thomas,
Stephanie Schrag
, and
Bernard W Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Feb
Similar articles in PubMed
DOI:
10.1093/cid/ciaa151
Streptococcus pyogenes pbp2x Mutation Confers Reduced Susceptibility to β-lactam antibiotics.
Kirsten Vannice,
Jessica Ricaldi
,
Srinivas Nanduri
, Ferric C Fang, John Lynch, Chloe Bryson-Cahn, Theodore Wright, Jeff Duchin, Meagan Kay,
Sopio Chochua
,
Chris Van Beneden
, and
Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2019 Oct
Similar articles in PubMed
DOI:
10.1093/cid/ciz1000
Multistate population and whole genome sequence based strain surveillance of invasive pneumococci recovered in the United States during 2017.
Jasmine Varghese,
Sopio Chochua
, Theresa Tran, Hollis Walker, Zhongya Li, Paula M Snippes Vagnone, Ruth Lynfield,
Lesley McGee
,
Yuan Li
,
Benjamin Metcalf
,
Tamara Pilishvili
, and
Bernard Beall
Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2019 Sep
Similar articles in PubMed
DOI:
10.1016/j.cmi.2019.09.008
Increase in Invasive Group A Streptococcal Disease and Emergence of Mucoid Strains in a Pediatric Population: February-June 2017.
Lorne W Walker, Lindsay Montoya,
Sopio Chochua
,
Bernard Beall
, and Michael Green
Open forum infectious diseases 2019 Jul (7) ofz275
Similar articles in PubMed
DOI:
10.1093/ofid/ofz275
Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018.
Sopio Chochua
,
Joy Rivers
,
Saundra Mathis
,
Zhongya Li
,
Srinivasan Velusamy
,
Lesley McGee
,
Chris Van Beneden
,
Yuan Li
,
Benjamin J Metcalf
, and
Bernard Beall
Emerging infectious diseases 2019 Aug (8)
Similar articles in PubMed
DOI:
10.3201/eid2508.181758
Group A Streptococcus outbreak among residents and employees of two skilled nursing facilities: North Carolina, 2017.
Katie J Palladino, Tammra Morrison,
Sopio Chochua
, Lori Bowers, and
Jennifer K MacFarquhar
American journal of infection control 2019 Jan
Similar articles in PubMed
DOI:
10.1016/j.ajic.2018.12.006
Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis.
Yuan Li
,
Benjamin J Metcalf
,
Sopio Chochua
,
Zhongya Li
,
Hollis Walker
,
Theresa Tran
,
Paulina A Hawkins
,
Ryan Gierke
,
Tamara Pilishvili
,
Lesley McGee
, and
Bernard W Beall
Nature communications 2019 Jan (1) 178
Similar articles in PubMed
DOI:
10.1038/s41467-018-07997-y
A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016.
Bernard Beall
,
Sopio Chochua
,
Robert E Gertz
,
Yuan Li
,
Zhongya Li
,
Lesley McGee
,
Benjamin J Metcalf
,
Jessica Ricaldi
,
Theresa Tran
,
Hollis Walker
, and
Tamara Pilishvili
Frontiers in microbiology 2018 92670
Similar articles in PubMed
DOI:
10.3389/fmicb.2018.02670
Population and Whole Genome Sequence Based Characterization of Invasive Group A Streptococci Recovered in the United States during 2015.
Sopio Chochua
,
Ben J Metcalf
,
Zhongya Li
,
Joy Rivers
,
Saundra Mathis
,
Delois Jackson
,
Robert E Gertz
,
Velusamy Srinivasan
, Ruth Lynfield,
Chris Van Beneden
,
Lesley McGee
, and
Bernard Beall
mBio 2017 Sep (5)
Similar articles in PubMed
DOI:
10.1128/mBio.01422-17
Validation of ß-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences.
Yuan Li
,
Benjamin J Metcalf
,
Sopio Chochua
,
Zhongya Li
,
Robert E Gertz
,
Hollis Walker
,
Paulina A Hawkins
,
Theresa Tran
,
Lesley McGee
,
Bernard W Beall
, and
BMC genomics 2017 Aug (1) 621
Similar articles in PubMed
DOI:
10.1186/s12864-017-4017-7
Key features of invasive pneumococcal isolates recovered in Lima, Peru determined through whole genome sequencing.
Paulina Hawkins, Erik Mercado,
Sopio Chochua
, Maria E Castillo, Isabel Reyes, Eduardo Chaparro, Rebecca Gladstone, Stephen D Bentley, Robert F Breiman,
Benjamin J Metcalf
,
Bernard Beall
, Theresa J Ochoa, and
Lesley McGee
International journal of medical microbiology : IJMM 2017 Jul
Similar articles in PubMed
DOI:
10.1016/j.ijmm.2017.07.008
Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015-2016.
Sopio Chochua
,
Benjamin J Metcalf
,
Zhongya Li
,
Hollis Walker
,
Theresa Tran
,
Lesley McGee
, and
Bernard Beall
Emerging infectious diseases 2017 06 (6) 922-930
Similar articles in PubMed
DOI:
10.3201/eid2306.170071
Cross-resistance to lincosamides, streptogramins A and pleuromutilins in Streptococcus agalactiae isolates from the USA.
Paulina A Hawkins
, Caitlin S Law,
Benjamin J Metcalf
,
Sopio Chochua
, Delois M Jackson, Lars F Westblade, Robert Jerris,
Bernard W Beall
, and
Lesley McGee
The Journal of antimicrobial chemotherapy 2017 Mar
Similar articles in PubMed
DOI:
10.1093/jac/dkx077
Streptococcus pneumoniae of Serotypes 9 and 14 Circulating in Brazil Over a 23-Year Period Prior to the Introduction of PCV10: Role of International Clones in the Evolution of Antimicrobial Resistance and Description of a Novel Genotype.
Tatiana C A Pinto, Fabíola C O Kegele, Cícero A G Dias, Rosana R Barros, José M Peralta, Vânia L C Merquior,
Maria da Gloria Carvalho
,
Sopio Chochua
, Paulina Hawkins,
Lesley McGee
, and Lucia M Teixeira
Antimicrobial agents and chemotherapy 2016 Aug
Similar articles in PubMed
DOI:
10.1128/AAC.00673-16
Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting ß-Lactam Resistance Levels in Streptococcus pneumoniae.
Yuan Li
,
Benjamin J Metcalf
,
Sopio Chochua
,
Zhongya Li
,
Robert E Gertz
,
Hollis Walker
,
Paulina A Hawkins
,
Theresa Tran
,
Cynthia G Whitney
,
Lesley McGee
, and
Bernard W Beall
mBio 2016 7(3)
Similar articles in PubMed
DOI:
10.1128/mBio.00756-16
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Page last reviewed:
Feb 1, 2023
Page last updated:
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