CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Dec 05, 2023. (Total: 4799 publications since 2011)

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Records 1-26 (of 26 Records)

Query Trace: all>>Sopio Chochua[CDC Author]
Invasive Group A Streptococcal Penicillin Binding Protein 2× Variants Associated with Reduced Susceptibility to β-Lactam Antibiotics in the United States, 2015-2021. Chochua S , Metcalf B , Li Z , Mathis S , Tran T , Rivers J , Fleming-Dutra KE , Li Y , McGee L , Beall B . Antimicrob Agents Chemother 2022 66 (9) e0080222
Simultaneous Late, Late-Onset Group B Streptococcal Meningitis in Identical Twins. Sherman G , Lamb GS , Platt CD , Wessels MR , Chochua S , Nakamura MM . Clin Pediatr (Phila) 2022 62 (2) 99228221113630
Continued Increase of Erythromycin- and Clindamycin-Nonsusceptibility among Invasive Group A Streptococci Driven by Genomic Clusters, USA, 2018-2019. Li Y , Rivers J , Mathis S , Li Z , McGee L , Chochua S , Metcalf BJ , Fleming-Dutra KE , Nanduri SA , Beall B . Clin Infect Dis 2022 76 (3) e1266-e1269
Cluster Transmission Drives Invasive Group A Streptococcus Disease Within the US and is Focused on Communities Experiencing Disadvantage. Metcalf B , Nanduri S , Chochua S , Li Y , Fleming-Dutra K , McGee L , Beall B . J Infect Dis 2022 226 (3) 546-553
Invasive pneumococcal disease clusters disproportionally impact persons experiencing homelessness, injecting drug users, and the western United States. Beall B , Chochua S , Li Z , Tran T , Varghese J , McGee L , Li Y , Metcalf B . J Infect Dis 2022 226 (2) 332-341
Genomic Characterization of Group A Streptococci Causing Pharyngitis and Invasive Disease in Colorado, USA, June 2016 - April 2017. Li Y , Dominguez S , Nanduri SA , Rivers J , Mathis S , Li Z , McGee L , Chochua S , Metcalf BJ , VanBeneden CA , Beall B , Miller L . J Infect Dis 2021 225 (10) 1841-1851
Patterns of antibiotic nonsusceptibility among invasive group A Streptococcus infections-United States, 2006-2017. Fay K , Onukwube J , Chochua S , Schaffner W , Cieslak P , Lynfield R , Muse A , Smelser C , Harrison LH , Farley M , Petit S , Alden N , Apostal M , Vagnone PS , Nanduri S , Beall B , VanBeneden CA . Clin Infect Dis 2021 73 (11) 1957-1964
Low but Increasing Prevalence of Reduced Beta-lactam Susceptibility Among Invasive Group B Streptococcal Isolates, US Population-Based Surveillance, 1998-2018. Kobayashi M , McGee L , Chochua S , Apostol M , Alden NB , Farley MM , Harrison LH , Lynfield R , Vagnone PS , Smelser C , Muse A , Thomas AR , Deng L , Metcalf BJ , Beall BW , Schrag SJ . Open Forum Infect Dis 2021 8 (2) ofaa634
Invasive pneumococcal strain distributions and isolate clusters associated with persons experiencing homelessness during 2018. Metcalf BJ , Chochua S , Walker H , Tran T , Li Z , Varghese J , SnippesVagnone PM , Lynfield R , McGee L , Li Y , Pilishvili T , Beall B . Clin Infect Dis 2020 72 (12) e948-e956
Sequential quadriplex real-time PCR for identifying 20 common emm types of Group A Streptococcus . Velusamy S , Jordak K , Kupor M , Chochua S , McGee L , Beall B . J Clin Microbiol 2020 59 (1)
Genomic Surveillance of Streptococcus pyogenes Strains Causing Invasive Disease, United States, 2016-2017. Li Y , Rivers J , Mathis S , Li Z , Velusamy S , Nanduri SA , VanBeneden CA , Snippes-Vagnone P , Lynfield R , McGee L , Chochua S , Metcalf BJ , Beall B . Front Microbiol 2020 11 1547
Multistate, population-based distributions of candidate vaccine targets, clonal complexes, and resistance features of invasive Group B Streptococci within the US: 2015-2017. McGee L , Chochua S , Li Z , Mathis S , Rivers J , Metcalf B , Ryan A , Alden N , Farley MM , Harrison LH , SnippesVagnone P , Lynfield R , Smelser C , Muse A , Thomas AR , Schrag S , Beall BW . Clin Infect Dis 2020 72 (6) 1004-1013
Streptococcus pyogenes pbp2x Mutation Confers Reduced Susceptibility to β-lactam antibiotics. Vannice K , Ricaldi J , Nanduri S , Fang FC , Lynch J , Bryson-Cahn C , Wright T , Duchin J , Kay M , Chochua S , VanBeneden C , Beall B . Clin Infect Dis 2019 71 (1) 201-204
Multistate population and whole genome sequence based strain surveillance of invasive pneumococci recovered in the United States during 2017. Varghese J , Chochua S , Tran T , Walker H , Li Z , SnippesVagnone PM , Lynfield R , McGee L , Li Y , Metcalf B , Pilishvili T , Beall B . Clin Microbiol Infect 2019 26 (4) 512 e1-512 e10
Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018. Chochua S , Rivers J , Mathis S , Li Z , Velusamy S , McGee L , VanBeneden C , Li Y , Metcalf BJ , Beall B . Emerg Infect Dis 2019 25 (8) 1543-1547
Increase in Invasive Group A Streptococcal Disease and Emergence of Mucoid Strains in a Pediatric Population: February-June 2017. Walker LW , Montoya L , Chochua S , Beall B , Green M . Open Forum Infect Dis 2019 6 (7) ofz275
Group A Streptococcus outbreak among residents and employees of two skilled nursing facilities: North Carolina, 2017. Palladino KJ , Morrison T , Chochua S , Bowers L , MacFarquhar JK . Am J Infect Control 2019 47 (7) 846-849
Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis. Li Y , Metcalf BJ , Chochua S , Li Z , Walker H , Tran T , Hawkins PA , Gierke R , Pilishvili T , McGee L , Beall BW . Nat Commun 2019 10 (1) 178
A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016. Beall B , Chochua S , Gertz RE Jr , Li Y , Li Z , McGee L , Metcalf BJ , Ricaldi J , Tran T , Walker H , Pilishvili T . Front Microbiol 2018 9 2670
Population and Whole Genome Sequence Based Characterization of Invasive Group A Streptococci Recovered in the United States during 2015. Chochua Sopio, Metcalf Ben J, Li Zhongya, Rivers Joy, Mathis Saundra, Jackson Delois, Gertz Robert E, Srinivasan Velusamy, Lynfield Ruth, Van Beneden Chris, McGee Lesley, Beall Bernard.mBio 2017 Sep (5) . mBio 2017 Sep (5)
Validation of ß-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences. Li Yuan, Metcalf Benjamin J, Chochua Sopio, Li Zhongya, Gertz Robert E, Walker Hollis, Hawkins Paulina A, Tran Theresa, McGee Lesley, Beall Bernard W, .BMC genomics 2017 Aug (1) 621 . BMC genomics 2017 Aug (1) 621
Key features of invasive pneumococcal isolates recovered in Lima, Peru determined through whole genome sequencing. Hawkins Paulina, Mercado Erik, Chochua Sopio, Castillo Maria E, Reyes Isabel, Chaparro Eduardo, Gladstone Rebecca, Bentley Stephen D, Breiman Robert F, Metcalf Benjamin J, Beall Bernard, Ochoa Theresa J, McGee Lesley.International journal of medical microbiology : IJMM 2017 Jul . International journal of medical microbiology : IJMM 2017 Jul
Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015-2016. Chochua Sopio, Metcalf Benjamin J, Li Zhongya, Walker Hollis, Tran Theresa, McGee Lesley, Beall Bernard. Emerging infectious diseases 2017 Jun 23(6) 922-930 . Emerging infectious diseases 2017 06 (6) 922-930
Cross-resistance to lincosamides, streptogramins A and pleuromutilins in Streptococcus agalactiae isolates from the USA. Hawkins Paulina A, Law Caitlin S, Metcalf Benjamin J, Chochua Sopio, Jackson Delois M, Westblade Lars F, Jerris Robert, Beall Bernard W, McGee Lesley. The Journal of antimicrobial chemotherapy 2017 Mar . The Journal of antimicrobial chemotherapy 2017 Mar
Streptococcus pneumoniae of Serotypes 9 and 14 Circulating in Brazil Over a 23-Year Period Prior to the Introduction of PCV10: Role of International Clones in the Evolution of Antimicrobial Resistance and Description of a Novel Genotype. Pinto Tatiana C A, Kegele Fabíola C O, Dias Cícero A G, Barros Rosana R, Peralta José M, Merquior Vânia L C, Carvalho Maria da Gloria, Chochua Sopio, Hawkins Paulina, McGee Lesley, Teixeira Lucia M. Antimicrobial agents and chemotherapy 2016 Aug . Antimicrobial agents and chemotherapy 2016 Aug
Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting ß-Lactam Resistance Levels in Streptococcus pneumoniae. Li Yuan, Metcalf Benjamin J, Chochua Sopio, Li Zhongya, Gertz Robert E, Walker Hollis, Hawkins Paulina A, Tran Theresa, Whitney Cynthia G, McGee Lesley, Beall Bernard W. mBio 2016 7(3) . mBio 2016 7(3)