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Public Health Genomics and Precision Health Knowledge Base (v9.0)
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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)
CDC-Authored Genomics and Precision Health Publications Database
Last data update: Mar 18, 2024
. (Total: 5445 publications)
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Records 1-30 (of 32 Records)
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all>>C Todd Davis[CDC Author]
Swine-to-Ferret Transmission of Antigenically Drifted Contemporary Swine H3N2 Influenza A Virus Is an Indicator of Zoonotic Risk to Humans.
Souza CK , Kimble JB , Anderson TK , Arendsee ZW , Hufnagel DE , Young KM , Gauger PC , Lewis NS ,
Davis CT
,
Thor S
,
Vincent Baker AL .
Viruses 2023 15 (2)
Interspecies Transmission from Pigs to Ferrets of Antigenically Distinct Swine H1 Influenza A Viruses with Reduced Reactivity to Candidate Vaccine Virus Antisera as Measures of Relative Zoonotic Risk.
Kimble JB , Souza CK , Anderson TK , Arendsee ZW , Hufnagel DE , Young KM , Lewis NS ,
Davis CT
,
Thor S
,
Vincent Baker AL .
Viruses 2022 14 (11)
Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines.
Wang L
,
Kainulainen MH
,
Jiang N
,
Di H
,
Bonenfant G
,
Mills L
,
Currier M
,
Shrivastava-Ranjan P
,
Calderon BM
,
Sheth M
,
Mann BR
,
Hossain J
,
Lin X
,
Lester S
,
Pusch EA
,
Jones J
,
Cui D
,
Chatterjee P
,
Jenks MH
,
Morantz EK
,
Larson GP
,
Hatta M
,
Harcourt JL
,
Tamin A
,
Li Y
,
Tao Y
,
Zhao K
,
Lacek K
,
Burroughs A
,
Wang W
,
Wilson M
,
Wong T
,
Park SH
,
Tong S
,
Barnes JR
,
Tenforde MW
,
Self WH , Shapiro NI , Exline MC , Files DC , Gibbs KW , Hager DN ,
Patel M
,
Halpin AL
,
McMullan LK
,
Lee JS
,
Xia H , Xie X , Shi PY ,
Davis CT
,
Spiropoulou CF
,
Thornburg NJ
,
Oberste MS
,
Dugan VG
,
Wentworth DE
,
Zhou B
.
Nat Commun 2022 13 (1) 4350
Influenza A virus circulation in backyard animals in the Pacific coast of Guatemala, 2013-2014.
Müller-Theissen ML ,
Azziz-Baumgartner E
,
Ortiz L ,
Szablewski CM
,
Alvarez D , Gonzalez-Reiche AS , Jara J ,
Davis CT
,
Cordon-Rosales C .
Zoonoses Public Health 2022 69 (7) 826-834
Crossroads of highly pathogenic H5N1: overlap between wild and domestic birds in the Black Sea-Mediterranean impacts global transmission.
Hill NJ , Smith LM , Muzaffar SB , Nagel JL , Prosser DJ , Sullivan JD , Spragens KA , Demattos CA , Demattos CC , El Sayed L , Erciyas-Yavuz K ,
Davis CT
,
Jones J
,
Kis Z
,
Donis RO
,
Newman SA , Takekawa JY .
Virus Evol 2021 7 (1) veaa093
Detection and Characterization of Swine-origin Influenza A(H1N1) Pandemic 2009 Viruses in Humans Following Zoonotic Transmission.
Cook PW
,
Stark T
,
Jones J
,
Kondor R
,
Zanders N
,
Benfer J , Scott S ,
Jang Y
,
Janas-Martindale A ,
Lindstrom S
,
Blanton L
,
Schiltz J , Tell R , Griesser R , Shult P , Reisdorf E , Danz T ,
Fry A
,
Barnes J
,
Vincent A ,
Wentworth DE
,
Davis CT
.
J Virol 2020 95 (2)
Genetically and antigenically divergent influenza A(H9N2) viruses exhibit differential replication and transmission phenotypes in mammalian models.
Belser JA
,
Sun X
,
Brock N
,
Pappas C
,
Pulit-Penaloza JA
,
Zeng H
,
Jang Y
,
Jones J
,
Carney PJ
,
Chang J
,
Van Long N , Diep NT ,
Thor S
,
Di H
,
Yang G
,
Cook PW
,
Creager HM
,
Wang D ,
McFarland J
,
Van Dong P ,
Wentworth DE
,
Tumpey TM
,
Barnes JR
,
Stevens J
,
Davis CT
,
Maines TR
.
J Virol 2020 94 (17)
Development of an RNA strand-specific hybridization assay to differentiate replicating versus non-replicating influenza A virus.
Yang G
,
Hodges EN
,
Winter J
,
Zanders N
,
Shcherbik S
,
Bousse T
,
Murray JR
,
Muraduzzaman AKM , Rahman M , Alamgir ASM , Sabrina Flora M ,
Blanton L
,
Barnes JR
,
Wentworth DE
,
Davis CT
.
J Clin Microbiol 2020 58 (6)
Detection of highly pathogenic avian influenza A(H5N6) viruses in waterfowl in Bangladesh.
Yang G
,
Chowdury S ,
Hodges E
,
Rahman MZ ,
Jang Y
,
Hossain ME ,
Jones J
,
Stark TJ
,
Di H
,
Cook PW
,
Ghosh S ,
Azziz-Baumgartner E
,
Barnes JR
,
Wentworth DE
,
Kennedy E
,
Davis CT
.
Virology 2019 534 36-44
Comparison of nucleic acid extraction methods for next-generation sequencing of avian influenza A virus from ferret respiratory samples.
Di H
,
Thor S
,
Trujillo AA
,
Stark T
,
Marinova-Petkova A
,
Jones J
,
Wentworth DE
,
Barnes J
,
Davis CT
.
J Virol Methods 2019 270 95-105
Attenuation of highly pathogenic avian influenza A(H5N1) viruses in Indonesia following the reassortment and acquisition of genes from low pathogenicity avian influenza A virus progenitors.
Dharmayanti Nlpi ,
Thor SW
,
Zanders N
,
Hartawan R , Ratnawati A ,
Jang Y
,
Rodriguez M , Suarez DL , Samaan G , Pudjiatmoko ,
Davis CT
.
Emerg Microbes Infect 2018 7 (1) 147
Avian influenza surveillance in domestic waterfowl and environment of live bird markets in Bangladesh, 2007-2012.
Khan SU , Gurley ES ,
Gerloff N
,
Rahman MZ ,
Simpson N
,
Rahman M , Haider N , Chowdhury S ,
Balish A
,
Zaman RU , Nasreen S , Chandra Das B ,
Azziz-Baumgartner E
,
Sturm-Ramirez K
,
Davis CT
,
Donis RO
,
Luby SP
.
Sci Rep 2018 8 (1) 9396
Antigenically diverse swine-origin H1N1 variant influenza viruses exhibit differential ferret pathogenesis and transmission phenotypes.
Pulit-Penaloza JA
,
Jones J
,
Sun X
,
Jang Y
,
Thor S
,
Belser JA
,
Zanders N
,
Creager HM
,
Ridenour C
,
Wang L
,
Stark TJ
,
Garten R
,
Chen LM
,
Barnes J
,
Tumpey TM
,
Wentworth DE
,
Maines TR
,
Davis CT
.
J Virol 2018 92 (11)
Influenza A(H3N2) Virus in Swine at Agricultural Fairs and Transmission to Humans, Michigan and Ohio, USA, 2016.
Bowman AS , Walia RR , Nolting JM , Vincent AL , Killian ML , Zentkovich MM , Lorbach JN , Lauterbach SE , Anderson TK ,
Davis CT
,
Zanders N
,
Jones J
,
Jang Y
,
Lynch B
,
Rodriguez MR
,
Blanton L
,
Lindstrom SE
,
Wentworth DE
,
Schiltz J , Averill JJ , Forshey T .
Emerg Infect Dis 2017 23 (9) 1551-1555
Highly Pathogenic Avian Influenza A(H5N1) Viruses at the Animal-Human Interface in Vietnam, 2003-2010.
Creanga A
,
Hang NLK , Cuong VD ,
Nguyen HT
,
Phuong HVM , Thanh LT , Thach NC , Hien PT , Tung N ,
Jang Y
,
Balish A
,
Dang NH , Duong MT , Huong NT , Hoa DN , Tho ND ,
Klimov A
,
Kapella BK
,
Gubareva L
,
Kile JC
,
Hien NT , Mai LQ ,
Davis CT
.
J Infect Dis 2017 216 S529-s538
Assessment of Molecular, Antigenic, and Pathological Features of Canine Influenza A(H3N2) Viruses That Emerged in the United States.
Pulit-Penaloza JA
,
Simpson N
,
Yang H
,
Creager HM
,
Jones J
,
Carney P
,
Belser JA
,
Yang G
,
Chang J
,
Zeng H
,
Thor S
,
Jang Y
,
Killian ML , Jenkins-Moore M , Janas-Martindale A , Dubovi E ,
Wentworth DE
,
Stevens J
,
Tumpey TM
,
Davis CT
,
Maines TR
.
J Infect Dis 2017 216 S499-s507
Shifting clade distribution, reassortment, and emergence of new subtypes of highly pathogenic avian influenza A(H5) viruses collected in Vietnamese poultry from 2012 to 2015.
Nguyen DT ,
Jang Y
,
Nguyen TD ,
Jones J
,
Shepard SS
,
Yang H
,
Gerloff N
,
Fabrizio T , Nguyen LV , Inui K ,
Yang G
,
Creanga A
,
Wang L
,
Mai DT ,
Thor S
,
Stevens J
,
To TL ,
Wentworth DE
,
Nguyen T , Pham DV , Bryant JE ,
Davis CT
.
J Virol 2016 91 (5)
A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses.
Anderson TK , Macken CA , Lewis NS , Scheuermann RH , Van Reeth K , Brown IH , Swenson SL , Simon G , Saito T , Berhane Y , Ciacci-Zanella J , Pereda A ,
Davis CT
,
Donis RO
,
Webby RJ , Vincent AL .
mSphere 2016 1 (6)
Multiplex assay for subtyping avian influenza A viruses by cDNA hybridization and adapter-mediated amplification.
Yang G
,
Jones J
,
Jang Y
,
Davis CT
.
Appl Microbiol Biotechnol 2016 100 (20) 8809-18
Genetically Diverse Low Pathogenicity Avian Influenza A Virus Subtypes Co-Circulate among Poultry in Bangladesh.
Gerloff NA
,
Khan SU ,
Zanders N
,
Balish A
,
Haider N , Islam A , Chowdhury S , Rahman MZ , Haque A , Hosseini P , Gurley ES , Luby SP ,
Wentworth DE
,
Donis RO
,
Sturm-Ramirez K ,
Davis CT
.
PLoS One 2016 11 (3) e0152131
Detection and Characterization of Clade 1 Reassortant H5N1 Viruses Isolated from Human Cases in Vietnam during 2013.
Thor SW
,
Nguyen H ,
Balish A
,
Hoang AN ,
Gustin KM
,
Nhung PT ,
Jones J
,
Thu NN
,
Davis W
,
Ngoc TN ,
Jang Y
,
Sleeman K
,
Villanueva J
,
Kile J
,
Gubareva LV
,
Lindstrom S
,
Tumpey TM
,
Davis CT
,
Long NT .
PLoS One 2015 10 (8) e0133867
Use of highly pathogenic avian influenza A(H5N1) gain-of-function studies for molecular-based surveillance and pandemic preparedness.
Davis CT
,
Chen LM
,
Pappas C
,
Stevens J
,
Tumpey TM
,
Gubareva LV
,
Katz JM
,
Villanueva JM
,
Donis RO
,
Cox NJ
.
mBio 2014 5 (6)
Improving pandemic influenza risk assessment.
Russell CA , Kasson PM ,
Donis RO
,
Riley S , Dunbar J , Rambaut A , Asher J ,
Burke S
,
Davis CT
,
Garten RJ
,
Gnanakaran S , Hay SI , Herfst S , Lewis NS , Lloyd-Smith JO , Macken CA , Maurer-Stroh S ,
Neuhaus E
,
Parrish CR , Pepin KM ,
Shepard SS
,
Smith DL , Suarez DL ,
Trock SC
,
Widdowson MA
,
George DB , Lipsitch M , Bloom JD .
Elife 2014 3 e03883
Identification of molecular markers associated with alteration of receptor-binding specificity in a novel genotype of highly pathogenic avian influenza A(H5N1) viruses detected in Cambodia in 2013.
Rith S ,
Davis CT
,
Duong V ,
Sar B
,
Horm SV , Chin S , Ly S , Laurent D , Richner B ,
Oboho I
,
Jang Y
,
Davis W
,
Thor S
,
Balish A
,
Iuliano AD
,
Sorn S , Holl D , Sok T , Seng H , Tarantola A , Tsuyuoka R , Parry A , Chea N , Allal L ,
Kitsutani P
,
Warren D
,
Prouty M , Horwood P ,
Widdowson MA
,
Lindstrom S
,
Villanueva J
,
Donis R
,
Cox N
,
Buchy P .
J Virol 2014 88 (23) 13897-909
Full-genome analysis of avian influenza A(H5N1) virus from a human, North America, 2013.
Pabbaraju K , Tellier R , Wong S , Li Y , Bastien N , Tang JW , Drews SJ ,
Jang Y
,
Davis CT
,
Fonseca K , Tipples GA .
Emerg Infect Dis 2014 20 (5) 887-91
Genetic characterization of clade 2.3.2.1 avian influenza A(H5N1) viruses, Indonesia, 2012.
Dharmayanti NL , Hartawan R , Wibawa H ,
Balish A
,
Donis R
,
Davis CT
,
Samaan G
.
Emerg Infect Dis 2014 20 (4) 677-80
Multiple reassortment events among highly pathogenic avian influenza A(H5N1) viruses detected in Bangladesh.
Gerloff NA
,
Khan SU ,
Balish A
,
Shanta IS ,
Simpson N
,
Berman L
,
Haider N ,
Poh MK
,
Islam A , Gurley E , Hasnat MA , Dey T ,
Shu B
,
Emery S
,
Lindstrom S
,
Haque A ,
Klimov A
,
Villanueva J
,
Rahman M ,
Azziz-Baumgartner E
,
Ziaur Rahman M , Luby SP , Zeidner N , Donis RO , Sturm-Ramirez K ,
Davis CT
.
Virology 2014 450-451 297-307
LABEL: fast and accurate lineage assignment with assessment of H5N1 and H9N2 influenza A hemagglutinins.
Shepard SS
,
Davis CT
,
Bahl J ,
Rivailler P
,
York IA
,
Donis RO
.
PLoS One 2014 9 (1) e86921
Molecular evolution of lineage 2 West Nile virus.
McMullen AR , Albayrak H , May FJ ,
Davis CT
,
Beasley DW , Barrett AD .
J Gen Virol 2013 94 318-25
Evolution of highly pathogenic avian influenza (H5N1) virus populations in Vietnam between 2007 and 2010.
Nguyen T ,
Rivailler P
,
Davis CT
,
Thi Hoa D ,
Balish A
,
Hoang Dang N ,
Jones J
,
Thi Vui D ,
Simpson N
,
Thu Huong N ,
Shu B
,
Loughlin R
,
Ferdinand K
,
Lindstrom SE
,
York IA
,
Klimov A
,
Donis RO
.
Virology 2012 432 (2) 405-16
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Page last reviewed:
Feb 1, 2024
Page last updated:
Mar 18, 2024
Content source:
Public Health Genomics Branch in the Division of Blood Disorders and Public Health Genomics
,
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