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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: May 30, 2023. (Total: 4302 publications since 2011)
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Records 1-30 (of 32 Records)
Query Trace: all>>C Todd Davis[CDC Author]
Swine-to-Ferret Transmission of Antigenically Drifted Contemporary Swine H3N2 Influenza A Virus Is an Indicator of Zoonotic Risk to Humans.
Souza CK , Kimble JB , Anderson TK , Arendsee ZW , Hufnagel DE , Young KM , Gauger PC , Lewis NS , Davis CT , Thor S , VincentBaker AL .
Viruses 2023 15 (2)
Interspecies Transmission from Pigs to Ferrets of Antigenically Distinct Swine H1 Influenza A Viruses with Reduced Reactivity to Candidate Vaccine Virus Antisera as Measures of Relative Zoonotic Risk.
Kimble JB , Souza CK , Anderson TK , Arendsee ZW , Hufnagel DE , Young KM , Lewis NS , Davis CT , Thor S , VincentBaker AL .
Viruses 2022 14 (11)
Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines.
Wang L , Kainulainen MH , Jiang N , Di H , Bonenfant G , Mills L , Currier M , Shrivastava-Ranjan P , Calderon BM , Sheth M , Mann BR , Hossain J , Lin X , Lester S , Pusch EA , Jones J , Cui D , Chatterjee P , Jenks MH , Morantz EK , Larson GP , Hatta M , Harcourt JL , Tamin A , Li Y , Tao Y , Zhao K , Lacek K , Burroughs A , Wang W , Wilson M , Wong T , Park SH , Tong S , Barnes JR , Tenforde MW , Self WH , Shapiro NI , Exline MC , Files DC , Gibbs KW , Hager DN , Patel M , Halpin AL , McMullan LK , Lee JS , Xia H , Xie X , Shi PY , Davis CT , Spiropoulou CF , Thornburg NJ , Oberste MS , Dugan VG , Wentworth DE , Zhou B .
Nat Commun 2022 13 (1) 4350 type
Influenza A virus circulation in backyard animals in the Pacific coast of Guatemala, 2013-2014.
Mller-Theissen ML , Azziz-Baumgartner E , Ortiz L , Szablewski CM , Alvarez D , Gonzalez-Reiche AS , Jara J , Davis CT , Cordon-Rosales C .
Zoonoses Public Health 2022 69 (7) 826-834
Crossroads of highly pathogenic H5N1: overlap between wild and domestic birds in the Black Sea-Mediterranean impacts global transmission.
Hill NJ , Smith LM , Muzaffar SB , Nagel JL , Prosser DJ , Sullivan JD , Spragens KA , Demattos CA , Demattos CC , ElSayed L , Erciyas-Yavuz K , Davis CT , Jones J , Kis Z , Donis RO , Newman SA , Takekawa JY .
Virus Evol 2021 7 (1) veaa093
Detection and Characterization of Swine-origin Influenza A(H1N1) Pandemic 2009 Viruses in Humans Following Zoonotic Transmission.
Cook PW , Stark T , Jones J , Kondor R , Zanders N , Benfer J , Scott S , Jang Y , Janas-Martindale A , Lindstrom S , Blanton L , Schiltz J , Tell R , Griesser R , Shult P , Reisdorf E , Danz T , Fry A , Barnes J , Vincent A , Wentworth DE , Davis CT .
J Virol 2020 95 (2)
Genetically and antigenically divergent influenza A(H9N2) viruses exhibit differential replication and transmission phenotypes in mammalian models.
Belser JA , Sun X , Brock N , Pappas C , Pulit-Penaloza JA , Zeng H , Jang Y , Jones J , Carney PJ , Chang J , VanLong N , Diep NT , Thor S , Di H , Yang G , Cook PW , Creager HM , Wang D , McFarland J , VanDong P , Wentworth DE , Tumpey TM , Barnes JR , Stevens J , Davis CT , Maines TR .
J Virol 2020 94 (17)
Development of an RNA strand-specific hybridization assay to differentiate replicating versus non-replicating influenza A virus.
Yang G , Hodges EN , Winter J , Zanders N , Shcherbik S , Bousse T , Murray JR , Muraduzzaman AKM , Rahman M , Alamgir ASM , SabrinaFlora M , Blanton L , Barnes JR , Wentworth DE , Davis CT .
J Clin Microbiol 2020 58 (6)
Detection of highly pathogenic avian influenza A(H5N6) viruses in waterfowl in Bangladesh.
Yang G , Chowdury S , Hodges E , Rahman MZ , Jang Y , Hossain ME , Jones J , Stark TJ , Di H , Cook PW , Ghosh S , Azziz-Baumgartner E , Barnes JR , Wentworth DE , Kennedy E , Davis CT .
Virology 2019 534 36-44
Comparison of nucleic acid extraction methods for next-generation sequencing of avian influenza A virus from ferret respiratory samples.
Di H , Thor S , Trujillo AA , Stark T , Marinova-Petkova A , Jones J , Wentworth DE , Barnes J , Davis CT .
J Virol Methods 2019 270 95-105
Attenuation of highly pathogenic avian influenza A(H5N1) viruses in Indonesia following the reassortment and acquisition of genes from low pathogenicity avian influenza A virus progenitors.
Dharmayanti Nlpi , Thor SW , Zanders N , Hartawan R , Ratnawati A , Jang Y , Rodriguez M , Suarez DL , Samaan G , Pudjiatmoko , Davis CT .
Emerg Microbes Infect 2018 7 (1) 147
Avian influenza surveillance in domestic waterfowl and environment of live bird markets in Bangladesh, 2007-2012.
Khan SU , Gurley ES , Gerloff N , Rahman MZ , Simpson N , Rahman M , Haider N , Chowdhury S , Balish A , Zaman RU , Nasreen S , ChandraDas B , Azziz-Baumgartner E , Sturm-Ramirez K , Davis CT , Donis RO , Luby SP .
Sci Rep 2018 8 (1) 9396
Antigenically diverse swine-origin H1N1 variant influenza viruses exhibit differential ferret pathogenesis and transmission phenotypes.
Pulit-Penaloza JA , Jones J , Sun X , Jang Y , Thor S , Belser JA , Zanders N , Creager HM , Ridenour C , Wang L , Stark TJ , Garten R , Chen LM , Barnes J , Tumpey TM , Wentworth DE , Maines TR , Davis CT .
J Virol 2018 92 (11)
Assessment of Molecular, Antigenic, and Pathological Features of Canine Influenza A(H3N2) Viruses That Emerged in the United States.
Pulit-Penaloza Joanna A, Simpson Natosha, Yang Hua, Creager Hannah M, Jones Joyce, Carney Paul, Belser Jessica A, Yang Genyan, Chang Jessie, Zeng Hui, Thor Sharmi, Jang Yunho, Killian Mary Lea, Jenkins-Moore Melinda, Janas-Martindale Alicia, Dubovi Edward, Wentworth David E, Stevens James, Tumpey Terrence M, Davis C Todd, Maines Taronna R. The Journal of infectious diseases 2017 Sep 216(suppl_4) S499-S507 .
The Journal of infectious diseases 2017 Sep (suppl_4) S499-S507
Highly Pathogenic Avian Influenza A(H5N1) Viruses at the Animal-Human Interface in Vietnam, 2003-2010.
Creanga Adrian, Hang Nguyen Le Khanh, Cuong Vuong Duc, Nguyen Ha T, Phuong Hoang Vu Mai, Thanh Le Thi, Thach Nguyen Co, Hien Pham Thi, Tung Nguyen, Jang Yunho, Balish Amanda, Dang Nguyen Hoang, Duong Mai Thuy, Huong Ngo Thu, Hoa Do Ngoc, Tho Nguyen Dang, Klimov Alexander, Kapella Bryan K, Gubareva Larisa, Kile James C, Hien Nguyen Tran, Mai Le Quynh, Davis C Todd. The Journal of infectious diseases 2017 216(suppl_4) S529-S538 .
The Journal of infectious diseases 2017 216(suppl_4) S529-S538
Influenza A(H3N2) Virus in Swine at Agricultural Fairs and Transmission to Humans, Michigan and Ohio, USA, 2016.
Bowman Andrew S, Walia Rasna R, Nolting Jacqueline M, Vincent Amy L, Killian Mary Lea, Zentkovich Michele M, Lorbach Joshua N, Lauterbach Sarah E, Anderson Tavis K, Davis C Todd, Zanders Natosha, Jones Joyce, Jang Yunho, Lynch Brian, Rodriguez Marisela R, Blanton Lenee, Lindstrom Stephen E, Wentworth David E, Schiltz John, Averill James J, Forshey Tony.Emerging infectious diseases 2017 09 (9) 1551-1555 .
Emerging infectious diseases 2017 09 (9) 1551-1555
Shifting clade distribution, reassortment, and emergence of new subtypes of highly pathogenic avian influenza A(H5) viruses collected in Vietnamese poultry from 2012 to 2015.
Nguyen Diep T, Jang Yunho, Nguyen Tho D, Jones Joyce, Shepard Samuel S, Yang Hua, Gerloff Nancy, Fabrizio Thomas, Nguyen Long V, Inui Ken, Yang Genyan, Creanga Adrian, Wang Li, Mai Duong T, Thor Sharmi, Stevens James, To Thanh L, Wentworth David E, Nguyen Tung, Pham Dong V, Bryant Juliet E, Davis C Todd.Journal of virology 2016 Dec .
Journal of virology 2016 Dec
A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses.
Anderson Tavis K, Macken Catherine A, Lewis Nicola S, Scheuermann Richard H, Van Reeth Kristien, Brown Ian H, Swenson Sabrina L, Simon Gaëlle, Saito Takehiko, Berhane Yohannes, Ciacci-Zanella Janice, Pereda Ariel, Davis C Todd, Donis Ruben O, Webby Richard J, Vincent Amy L. mSphere 1(6) .
mSphere 1(6)
Multiplex assay for subtyping avian influenza A viruses by cDNA hybridization and adapter-mediated amplification.
Yang Genyan, Jones Joyce, Jang Yunho, Davis C Todd. Applied microbiology and biotechnology 2016 Jul .
Applied microbiology and biotechnology 2016 Jul
Genetically Diverse Low Pathogenicity Avian Influenza A Virus Subtypes Co-Circulate among Poultry in Bangladesh.
Gerloff Nancy A, Khan Salah Uddin, Zanders Natosha, Balish Amanda, Haider Najmul, Islam Ausraful, Chowdhury Sukanta, Rahman Mahmudur Ziaur, Haque Ainul, Hosseini Parviez, Gurley Emily S, Luby Stephen P, Wentworth David E, Donis Ruben O, Sturm-Ramirez Katharine, Davis C Todd. PloS one 2016 11(3) e0152131 .
PloS one 2016 11(3) e0152131
Detection and Characterization of Clade 1 Reassortant H5N1 Viruses Isolated from Human Cases in Vietnam during 2013.
Thor Sharmi W, Nguyen Hieu, Balish Amanda, Hoang Anh Nguyen, Gustin Kortney M, Nhung Pham Thi, Jones Joyce, Thu Ngoc Nguyen, Davis William, Ngoc Thao Nguyen Thi, Jang Yunho, Sleeman Katrina, Villanueva Julie, Kile James, Gubareva Larisa V, Lindstrom Stephen, Tumpey Terrence M, Davis C Todd, Long Nguyen Thanh. PLoS ONE 2015 10(8) e0133867 .
PLoS ONE 2015 10(8) e0133867
Use of highly pathogenic avian influenza A(H5N1) gain-of-function studies for molecular-based surveillance and pandemic preparedness.
Davis C Todd, Chen Li-Mei, Pappas Claudia, Stevens James, Tumpey Terrence M, Gubareva Larisa V, Katz Jacqueline M, Villanueva Julie M, Donis Ruben O, Cox Nancy J. MBio 2014 5(6) .
MBio 2014 5(6)
Improving pandemic influenza risk assessment.
Russell Colin A, Kasson Peter M, Donis Ruben O, Riley Steven, Dunbar John, Rambaut Andrew, Asher Jason, Burke Stephen, Davis C Todd, Garten Rebecca J, Gnanakaran Sandrasegaram, Hay Simon I, Herfst Sander, Lewis Nicola S, Lloyd-Smith James O, Macken Catherine A, Maurer-Stroh Sebastian, Neuhaus Elizabeth, Parrish Colin R, Pepin Kim M, Shepard Samuel S, Smith David L, Suarez David L, Trock Susan C, Widdowson Marc-Alain, George Dylan B, Lipsitch Marc, Bloom Jesse D. Elife 2014 3e03883 .
Elife 2014 3e03883
Identification of molecular markers associated with alteration of receptor-binding specificity in a novel genotype of highly pathogenic avian influenza A(H5N1) viruses detected in Cambodia in 2013.
Rith Sareth, Davis C Todd, Duong Veasna, Sar Borann, Horm Srey Viseth, Chin Savuth, Ly Sovann, Laurent Denis, Richner Beat, Oboho Ikwo, Jang Yunho, Davis William, Thor Sharmi, Balish Amanda, Iuliano A Danielle, Sorn San, Holl Davun, Sok Touch, Seng Heng, Tarantola Arnaud, Tsuyuoka Reiko, Parry Amy, Chea Nora, Allal Lotfi, Kitsutani Paul, Warren Dora, Prouty Michael, Horwood Paul, Widdowson Marc-Alain, Lindstrom Stephen, Villanueva Julie, Donis Ruben, Cox Nancy, Buchy Philippe. J. Virol. 2014 Dec 88(23) 13897-909 .
J. Virol. 2014 Dec 88(23) 13897-909
Full-genome analysis of avian influenza A(H5N1) virus from a human, North America, 2013.
Pabbaraju Kanti, Tellier Raymond, Wong Sallene, Li Yan, Bastien Nathalie, Tang Julian W, Drews Steven J, Jang Yunho, Davis C Todd, Fonseca Kevin, Tipples Graham A. Emerging Infect. Dis. 2014 May 20(5) 887-91 .
Emerging Infect. Dis. 2014 May 20(5) 887-91
Genetic characterization of clade 2.3.2.1 avian influenza A(H5N1) viruses, Indonesia, 2012.
Dharmayanti Ni Luh Putu Indi, Hartawan Risza, , Wibawa Hendra, , Balish Amanda, Donis Ruben, Davis C Todd, Samaan Gina. Emerging Infect. Dis. 2014 Apr 20(4) 671-4 .
Emerging Infect. Dis. 2014 Apr 20(4) 671-4
Multiple reassortment events among highly pathogenic avian influenza A(H5N1) viruses detected in Bangladesh.
Gerloff Nancy A, Khan Salah Uddin, Balish Amanda, Shanta Ireen S, Simpson Natosha, Berman Lashondra, Haider Najmul, Poh Mee Kian, Islam Ausraful, Gurley Emily, Hasnat Md Abdul, Dey T, Shu Bo, Emery Shannon, Lindstrom Stephen, Haque Ainul, Klimov Alexander, Villanueva Julie, Rahman Mahmudur, Azziz-Baumgartner Eduardo, Ziaur Rahman Md, Luby Stephen P, Zeidner Nord, Donis Ruben O, Sturm-Ramirez Katharine, Davis C Todd. Virology 2014 Feb 450-451297-307 .
Virology 2014 Feb 450-451297-307
LABEL: fast and accurate lineage assignment with assessment of H5N1 and H9N2 influenza A hemagglutinins.
Shepard Samuel S, Davis C Todd, Bahl Justin, Rivailler Pierre, York Ian A, Donis Ruben O. PLoS ONE 2014 9(1) e86921 .
PloS one 2014 (1) e86921
Molecular evolution of lineage 2 West Nile virus.
McMullen Allison R, Albayrak Harun, May Fiona J, Davis C Todd, Beasley David W C, Barrett Alan D T. J. Gen. Virol. 2013 Feb 94(Pt 2) 318-25 .
J. Gen. Virol. 2013 Feb 94(Pt 2) 318-25
Evolution of highly pathogenic avian influenza (H5N1) virus populations in Vietnam between 2007 and 2010.
Nguyen Tung, Rivailler Pierre, Davis C Todd, Hoa Do Thi, Balish Amanda, Dang Nguyen Hoang, Jones Joyce, Vui Dam Thi, Simpson Natosha, Huong Ngo Thu, Shu Bo, Loughlin Rosette, Ferdinand Karen, Lindstrom Stephen E, York Ian A, Klimov Alexander, Donis Ruben O. Virology 2012 Oct 25. 432(2) 405-16 .
Virology 2012 Oct 25. 432(2) 405-16
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