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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: May 30, 2023. (Total: 4302 publications since 2011)
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Records 1-20 (of 20 Records)
Query Trace: all>>John R Barnes[CDC Author]
SARS-CoV-2 Delta-Omicron Recombinant Viruses, United States.
Lacek KA , Rambo-Martin BL , Batra D , Zheng XY , Hassell N , Sakaguchi H , Peacock T , Groves N , Keller M , Wilson MM , Sheth M , Davis ML , Borroughs M , Gerhart J , Shepard SS , Cook PW , Lee J , Wentworth DE , Barnes JR , Kondor R , Paden CR .
Emerg Infect Dis 2022 28 (7) 1442-1445 type
Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines.
Wang L , Kainulainen MH , Jiang N , Di H , Bonenfant G , Mills L , Currier M , Shrivastava-Ranjan P , Calderon BM , Sheth M , Mann BR , Hossain J , Lin X , Lester S , Pusch EA , Jones J , Cui D , Chatterjee P , Jenks MH , Morantz EK , Larson GP , Hatta M , Harcourt JL , Tamin A , Li Y , Tao Y , Zhao K , Lacek K , Burroughs A , Wang W , Wilson M , Wong T , Park SH , Tong S , Barnes JR , Tenforde MW , Self WH , Shapiro NI , Exline MC , Files DC , Gibbs KW , Hager DN , Patel M , Halpin AL , McMullan LK , Lee JS , Xia H , Xie X , Shi PY , Davis CT , Spiropoulou CF , Thornburg NJ , Oberste MS , Dugan VG , Wentworth DE , Zhou B .
Nat Commun 2022 13 (1) 4350 type
Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants.
Welch NL , Zhu M , Hua C , Weller J , Mirhashemi ME , Nguyen TG , Mantena S , Bauer MR , Shaw BM , Ackerman CM , Thakku SG , Tse MW , Kehe J , Uwera MM , Eversley JS , Bielwaski DA , McGrath G , Braidt J , Johnson J , Cerrato F , Moreno GK , Krasilnikova LA , Petros BA , Gionet GL , King E , Huard RC , Jalbert SK , Cleary ML , Fitzgerald NA , Gabriel SB , Gallagher GR , Smole SC , Madoff LC , Brown CM , Keller MW , Wilson MM , Kirby MK , Barnes JR , Park DJ , Siddle KJ , Happi CT , Hung DT , Springer M , MacInnis BL , Lemieux JE , Rosenberg E , Branda JA , Blainey PC , Sabeti PC , Myhrvold C .
Nat Med 2022 28 (5) 1083-1094 type
Vaccine Effectiveness Against Life-Threatening Influenza Illness in US Children.
Olson SM , Newhams MM , Halasa NB , Feldstein LR , Novak T , Weiss SL , Coates BM , Schuster JE , Schwarz AJ , Maddux AB , Hall MW , Nofziger RA , Flori HR , Gertz SJ , Kong M , Sanders RC , Irby K , Hume JR , Cullimore ML , Shein SL , Thomas NJ , Stewart LS , Barnes JR , Patel MM , Randolph AG .
Clin Infect Dis 2022 75 (2) 230-238
Characterizing the Countrywide Epidemic Spread of Influenza A(H1N1)pdm09 Virus in Kenya between 2009 and 2018.
Owuor DC , deLaurent ZR , Kikwai GK , Mayieka LM , Ochieng M , Mller NF , Otieno NA , Emukule GO , Hunsperger EA , Garten R , Barnes JR , Chaves SS , Nokes DJ , Agoti CN .
Viruses 2021 13 (10)
SARS-CoV-2 spike D614G change enhances replication and transmission.
Zhou B , ThiNhuThao T , Hoffmann D , Taddeo A , Ebert N , Labroussaa F , Pohlmann A , King J , Steiner S , Kelly JN , Portmann J , Halwe NJ , Ulrich L , Treb BS , Fan X , Hoffmann B , Wang L , Thomann L , Lin X , Stalder H , Pozzi B , deBrot S , Jiang N , Cui D , Hossain J , Wilson M , Keller M , Stark TJ , Barnes JR , Dijkman R , Jores J , Benarafa C , Wentworth DE , Thiel V , Beer M .
Nature 2021 592 (7852) 122-127 type
Effect of antigenic drift on influenza vaccine effectiveness in the United States - 2019-2020.
Tenforde MW , Kondor RJG , Chung JR , Zimmerman RK , Nowalk MP , Jackson ML , Jackson LA , Monto AS , Martin ET , Belongia EA , McLean HQ , Gaglani M , Rao A , Kim SS , Stark TJ , Barnes JR , Wentworth D , Patel MM , Flannery B .
Clin Infect Dis 2020 73 (11) e4244-e4250
Influenza vaccine effectiveness against hospitalization in the United States, 2019-2020.
Tenforde MW , Talbot HK , Trabue CH , Gaglani M , McNeal TM , Monto AS , Martin ET , Zimmerman RK , Silveira F , Middleton DB , Olson SM , GartenKondor RJ , Barnes JR , Ferdinands JM , Patel MM .
J Infect Dis 2020 224 (5) 813-820
Detection and discrimination of influenza B Victoria lineage deletion variant viruses by real-time RT-PCR.
Shu B , Kirby MK , Warnes C , Sessions WM , Davis WG , Liu J , Wilson MM , Lindstrom S , Wentworth DE , Barnes JR .
Euro Surveill 2020 25 (41)
A heterogenous swine show circuit drives zoonotic transmission of influenza A viruses in the United States.
Nelson MI , Perofsky A , McBride DS , Rambo-Martin BL , Wilson MM , Barnes JR , vanBakel H , Khan Z , Dutta J , Nolting JM , Bowman AS .
J Virol 2020 94 (24)
Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution.
Huddleston J , Barnes JR , Rowe T , Xu X , Kondor R , Wentworth DE , Whittaker L , Ermetal B , Daniels RS , McCauley JW , Fujisaki S , Nakamura K , Kishida N , Watanabe S , Hasegawa H , Barr I , Subbarao K , Barrat-Charlaix P , Neher RA , Bedford T .
Elife 2020 9
Genetically and antigenically divergent influenza A(H9N2) viruses exhibit differential replication and transmission phenotypes in mammalian models.
Belser JA , Sun X , Brock N , Pappas C , Pulit-Penaloza JA , Zeng H , Jang Y , Jones J , Carney PJ , Chang J , VanLong N , Diep NT , Thor S , Di H , Yang G , Cook PW , Creager HM , Wang D , McFarland J , VanDong P , Wentworth DE , Tumpey TM , Barnes JR , Stevens J , Davis CT , Maines TR .
J Virol 2020 94 (17)
Massively multiplexed nucleic acid detection using Cas13.
Ackerman CM , Myhrvold C , Thakku SG , Freije CA , Metsky HC , Yang DK , Ye SH , Boehm CK , Kosoko-Thoroddsen TF , Kehe J , Nguyen TG , Carter A , Kulesa A , Barnes JR , Dugan VG , Hung DT , Blainey PC , Sabeti PC .
Nature 2020 582 (7811) 277-282
Development of an RNA strand-specific hybridization assay to differentiate replicating versus non-replicating influenza A virus.
Yang G , Hodges EN , Winter J , Zanders N , Shcherbik S , Bousse T , Murray JR , Muraduzzaman AKM , Rahman M , Alamgir ASM , SabrinaFlora M , Blanton L , Barnes JR , Wentworth DE , Davis CT .
J Clin Microbiol 2020 58 (6)
Detection of highly pathogenic avian influenza A(H5N6) viruses in waterfowl in Bangladesh.
Yang G , Chowdury S , Hodges E , Rahman MZ , Jang Y , Hossain ME , Jones J , Stark TJ , Di H , Cook PW , Ghosh S , Azziz-Baumgartner E , Barnes JR , Wentworth DE , Kennedy E , Davis CT .
Virology 2019 534 36-44
Author Correction: Direct RNA Sequencing of the Coding Complete Influenza A Virus Genome.
Keller Matthew W, Rambo-Martin Benjamin L, Wilson Malania M, Ridenour Callie A, Shepard Samuel S, Stark Thomas J, Neuhaus Elizabeth B, Dugan Vivien G, Wentworth David E, Barnes John R. Scientific reports 2018 Oct 8(1) 15746 .
Scientific reports 2018 Oct 8(1) 15746
Direct RNA Sequencing of the Coding Complete Influenza A Virus Genome.
Keller MW , Rambo-Martin BL , Wilson MM , Ridenour CA , Shepard SS , Stark TJ , Neuhaus EB , Dugan VG , Wentworth DE , Barnes JR .
Sci Rep 2018 8 (1) 14408
Influenza-Associated Parotitis During the 2014-2015 Influenza Season in the United States.
Rolfes MA , Millman AJ , Talley P , Elbadawi LI , Kramer NA , Barnes JR , Blanton L , Davis JP , Cole S , Dreisig JJ , Garten R , Haupt T , Jackson MA , Kocharian A , Leifer D , Lynfield R , Martin K , McHugh L , Robinson S , Turabelidze G , Webber LA , PearceWeinberg M , Wentworth DE , Finelli L , Jhung MA .
Clin Infect Dis 2018 67 (4) 485-492
Multiplex RT-PCR for Simultaneous Surveillance of Influenza A and B Viruses.
Zhou Bin, Deng Yi-Mo, Barnes John R, Sessions October, Chou Tsui-Wen, Wilson Malania, Stark Thomas J, Volk Michelle, Spirason Natalie, Halpin Rebecca A, Kamaraj Uma Sangumathi, Ding Tao, Stockwell Timothy B, Salvatore Mirella, Ghedin Elodie, Barr Ian G, Wentworth David E.Journal of clinical microbiology 2017 Oct .
Journal of clinical microbiology 2017 Oct
Enhanced genetic characterization of influenza A(H3N2) viruses and vaccine effectiveness by genetic group, 2014-2015.
Flannery Brendan, Zimmerman Richard K, Gubareva Larisa V, Garten Rebecca J, Chung Jessie R, Nowalk Mary Patricia, Jackson Michael L, Jackson Lisa A, Monto Arnold S, Ohmit Suzanne E, Belongia Edward A, McLean Huong Q, Gaglani Manjusha, Piedra Pedro A, Mishin Vasiliy P, Chesnokov Anton P, Spencer Sarah, Thaker Swathi N, Barnes John R, Foust Angie, Sessions Wendy, Xu Xiyan, Katz Jacqueline, Fry Alicia M.The Journal of infectious diseases 2016 May .
The Journal of infectious diseases 2016 May
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