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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jun 28, 2022. (Total: 3910 publications since 2011)
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Records 1-19 (of 19 Records)
Query Trace: all>>John R Barnes[CDC Author]
SARS-CoV-2 Delta-Omicron Recombinant Viruses, United States.
Kristine A Lacek, Benjamin L Rambo-Martin, Dhwani Batra, Xiao-Yu Zheng, Norman Hassell, Hitoshi Sakaguchi, Thomas Peacock, Natalie Groves, Matthew Keller, Malania M Wilson, Mili Sheth, Morgan L Davis, Mark Borroughs, Jonathan Gerhart, Samuel S Shepard, Peter W Cook, Justin Lee, David E Wentworth, John R Barnes, Rebecca Kondor, and Clinton R Paden
Emerging infectious diseases 2022 28(7)
Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants.
Nicole L Welch, Meilin Zhu, Catherine Hua, Juliane Weller, Marzieh Ezzaty Mirhashemi, Tien G Nguyen, Sreekar Mantena, Matthew R Bauer, Bennett M Shaw, Cheri M Ackerman, Sri Gowtham Thakku, Megan W Tse, Jared Kehe, Marie-Martine Uwera, Jacqueline S Eversley, Derek A Bielwaski, Graham McGrath, Joseph Braidt, Jeremy Johnson, Felecia Cerrato, Gage K Moreno, Lydia A Krasilnikova, Brittany A Petros, Gabrielle L Gionet, Ewa King, Richard C Huard, Samantha K Jalbert, Michael L Cleary, Nicholas A Fitzgerald, Stacey B Gabriel, Glen R Gallagher, Sandra C Smole, Lawrence C Madoff, Catherine M Brown, Matthew W Keller, Malania M Wilson, Marie K Kirby, John R Barnes, Daniel J Park, Katherine J Siddle, Christian T Happi, Deborah T Hung, Michael Springer, Bronwyn L MacInnis, Jacob E Lemieux, Eric Rosenberg, John A Branda, Paul C Blainey, Pardis C Sabeti, and Cameron Myhrvold
Nature medicine 2022
Vaccine Effectiveness Against Life-Threatening Influenza Illness in US Children.
Samantha M Olson, Margaret M Newhams, Natasha B Halasa, Leora R Feldstein, Tanya Novak, Scott L Weiss, Bria M Coates, Jennifer E Schuster, Adam J Schwarz, Aline B Maddux, Mark W Hall, Ryan A Nofziger, Heidi R Flori, Shira J Gertz, Michele Kong, Ronald C Sanders, Katherine Irby, Janet R Hume, Melissa L Cullimore, Steven L Shein, Neal J Thomas, Laura S Stewart, John R Barnes, Manish M Patel, Adrienne G Randolph, and
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022
Characterizing the Countrywide Epidemic Spread of Influenza A(H1N1)pdm09 Virus in Kenya between 2009 and 2018.
D Collins Owuor, Zaydah R de Laurent, Gilbert K Kikwai, Lillian M Mayieka, Melvin Ochieng, Nicola F Müller, Nancy A Otieno, Gideon O Emukule, Elizabeth A Hunsperger, Rebecca Garten, John R Barnes, Sandra S Chaves, D James Nokes, and Charles N Agoti
Viruses 2021 13(10)
SARS-CoV-2 spike D614G change enhances replication and transmission.
Bin Zhou, Tran Thi Nhu Thao, Donata Hoffmann, Adriano Taddeo, Nadine Ebert, Fabien Labroussaa, Anne Pohlmann, Jacqueline King, Silvio Steiner, Jenna N Kelly, Jasmine Portmann, Nico Joel Halwe, Lorenz Ulrich, Bettina Salome Trüeb, Xiaoyu Fan, Bernd Hoffmann, Li Wang, Lisa Thomann, Xudong Lin, Hanspeter Stalder, Berta Pozzi, Simone de Brot, Nannan Jiang, Dan Cui, Jaber Hossain, Malania Wilson, Matthew Keller, Thomas J Stark, John R Barnes, Ronald Dijkman, Joerg Jores, Charaf Benarafa, David E Wentworth, Volker Thiel, and Martin Beer
Nature 2021 2 (7852) 122-127
Influenza vaccine effectiveness against hospitalization in the United States, 2019-2020.
Mark W Tenforde, H Keipp Talbot, Christopher H Trabue, Manjusha Gaglani, Tresa M McNeal, Arnold S Monto, Emily T Martin, Richard K Zimmerman, Fernanda Silveira, Donald B Middleton, Samantha M Olson, Rebecca J Garten Kondor, John R Barnes, Jill M Ferdinands, Manish M Patel, and
The Journal of infectious diseases 2020 Dec
Effect of antigenic drift on influenza vaccine effectiveness in the United States - 2019-2020.
Mark W Tenforde, Rebecca J Garten Kondor, Jessie R Chung, Richard K Zimmerman, Mary Patricia Nowalk, Michael L Jackson, Lisa A Jackson, Arnold S Monto, Emily T Martin, Edward A Belongia, Huong Q McLean, Manjusha Gaglani, Arundhati Rao, Sara S Kim, Thomas J Stark, John R Barnes, David Wentworth, Manish M Patel, and Brendan Flannery
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Dec
Detection and discrimination of influenza B Victoria lineage deletion variant viruses by real-time RT-PCR.
Bo Shu, Marie K Kirby, Christine Warnes, Wendy M Sessions, William G Davis, Ji Liu, Malania M Wilson, Stephen Lindstrom, David E Wentworth, and John R Barnes
Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2020 Oct 25(41)
A heterogenous swine show circuit drives zoonotic transmission of influenza A viruses in the United States.
Martha I Nelson, Amanda Perofsky, Dillon S McBride, Benjamin L Rambo-Martin, Malania M Wilson, John R Barnes, Harm van Bakel, Zenab Khan, Jayeeta Dutta, Jacqueline M Nolting, and Andrew S Bowman
Journal of virology 2020 Sep
Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution.
John Huddleston, John R Barnes, Thomas Rowe, Xiyan Xu, Rebecca Kondor, David E Wentworth, Lynne Whittaker, Burcu Ermetal, Rodney Stuart Daniels, John W McCauley, Seiichiro Fujisaki, Kazuya Nakamura, Noriko Kishida, Shinji Watanabe, Hideki Hasegawa, Ian Barr, Kanta Subbarao, Pierre Barrat-Charlaix, Richard A Neher, and Trevor Bedford
eLife 2020 Sep 9
Genetically and antigenically divergent influenza A(H9N2) viruses exhibit differential replication and transmission phenotypes in mammalian models.
Jessica A Belser, Xiangjie Sun, Nicole Brock, Claudia Pappas, Joanna A Pulit-Penaloza, Hui Zeng, Yunho Jang, Joyce Jones, Paul J Carney, Jessie Chang, Nguyen Van Long, Nguyen Thi Diep, Sharmi Thor, Han Di, Genyan Yang, Peter W Cook, Hannah M Creager, Dayan Wang, Jeffrey McFarland, Pham Van Dong, David E Wentworth, Terrence M Tumpey, John R Barnes, James Stevens, C Todd Davis, and Taronna R Maines
Journal of virology 2020 Jul
Massively multiplexed nucleic acid detection using Cas13.
Cheri M Ackerman, Cameron Myhrvold, Sri Gowtham Thakku, Catherine A Freije, Hayden C Metsky, David K Yang, Simon H Ye, Chloe K Boehm, Tinna-Sólveig F Kosoko-Thoroddsen, Jared Kehe, Tien G Nguyen, Amber Carter, Anthony Kulesa, John R Barnes, Vivien G Dugan, Deborah T Hung, Paul C Blainey, and Pardis C Sabeti
Nature 2020 Apr
Development of an RNA strand-specific hybridization assay to differentiate replicating versus non-replicating influenza A virus.
Genyan Yang, Erin N Hodges, Jörn Winter, Natosha Zanders, Svetlana Shcherbik, Tatiana Bousse, Janna R Murray, A K M Muraduzzaman, Mahbubur Rahman, A S M Alamgir, Meerjady Sabrina Flora, Lenee Blanton, John R Barnes, David E Wentworth, and C Todd Davis
Journal of clinical microbiology 2020 Apr
Detection of highly pathogenic avian influenza A(H5N6) viruses in waterfowl in Bangladesh.
Genyan Yang, Sukanta Chowdury, Erin Hodges, Mohammed Ziaur Rahman, Yunho Jang, Mohammad Enayet Hossain, Joyce Jones, Thomas J Stark, Han Di, Peter W Cook, Sumon Ghosh, Eduardo Azziz-Baumgartner, John R Barnes, David E Wentworth, Erin Kennedy, and C Todd Davis
Virology 2019 May 36-44
Author Correction: Direct RNA Sequencing of the Coding Complete Influenza A Virus Genome.
Matthew W Keller, Benjamin L Rambo-Martin, Malania M Wilson, Callie A Ridenour, Samuel S Shepard, Thomas J Stark, Elizabeth B Neuhaus, Vivien G Dugan, David E Wentworth, and John R Barnes
Scientific reports 2018 Oct 8(1) 15746
Direct RNA Sequencing of the Coding Complete Influenza A Virus Genome.
Matthew W Keller, Benjamin L Rambo-Martin, Malania M Wilson, Callie A Ridenour, Samuel S Shepard, Thomas J Stark, Elizabeth B Neuhaus, Vivien G Dugan, David E Wentworth, and John R Barnes
Scientific reports 2018 Sep (1) 14408
Influenza-Associated Parotitis During the 2014-2015 Influenza Season in the United States.
Melissa A Rolfes, Alexander J Millman, Pamela Talley, Lina I Elbadawi, Natalie A Kramer, John R Barnes, Lenee Blanton, Jeffrey P Davis, Stefanie Cole, John J Dreisig, Rebecca Garten, Thomas Haupt, Mary Anne Jackson, Anna Kocharian, Daniel Leifer, Ruth Lynfield, Karen Martin, Lisa McHugh, Sara Robinson, George Turabelidze, Lori A Webber, Meghan Pearce Weinberg, David E Wentworth, Lyn Finelli, and Michael A Jhung
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Mar
Multiplex RT-PCR for Simultaneous Surveillance of Influenza A and B Viruses.
Bin Zhou, Yi-Mo Deng, John R Barnes, October M Sessions, Tsui-Wen Chou, Malania Wilson, Thomas J Stark, Michelle Volk, Natalie Spirason, Rebecca A Halpin, Uma Sangumathi Kamaraj, Tao Ding, Timothy B Stockwell, Mirella Salvatore, Elodie Ghedin, Ian G Barr, and David E Wentworth
Journal of clinical microbiology 2017 Oct
Enhanced genetic characterization of influenza A(H3N2) viruses and vaccine effectiveness by genetic group, 2014-2015.
Brendan Flannery, Richard K Zimmerman, Larisa V Gubareva, Rebecca J Garten, Jessie R Chung, Mary Patricia Nowalk, Michael L Jackson, Lisa A Jackson, Arnold S Monto, Suzanne E Ohmit, Edward A Belongia, Huong Q McLean, Manjusha Gaglani, Pedro A Piedra, Vasiliy P Mishin, Anton P Chesnokov, Sarah Spencer, Swathi N Thaker, John R Barnes, Angie Foust, Wendy Sessions, Xiyan Xu, Jacqueline Katz, and Alicia M Fry
The Journal of infectious diseases 2016 May
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