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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 22, 2022. (Total: 4021 publications since 2011)
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Records 1-30 (of 38 Records)
Query Trace: all>>Bernard Beall[CDC Author]
Invasive Group A Streptococcal Penicillin Binding Protein 2× Variants Associated with Reduced Susceptibility to β-Lactam Antibiotics in the United States, 2015-2021.
Sopio Chochua, Benjamin Metcalf, Zhongya Li, Saundra Mathis, Theresa Tran, Joy Rivers, Katherine E Fleming-Dutra, Yuan Li, Lesley McGee, and Bernard Beall
Antimicrobial agents and chemotherapy 2022 e0080222
Continued Increase of Erythromycin- and Clindamycin-Nonsusceptibility among Invasive Group A Streptococci Driven by Genomic Clusters, USA, 2018-2019.
Yuan Li, Joy Rivers, Saundra Mathis, Zhongya Li, Lesley McGee, Sopio Chochua, Benjamin J Metcalf, Katherine E Fleming-Dutra, Srinivas A Nanduri, and Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022
Cluster Transmission Drives Invasive Group A Streptococcus Disease Within the US and is Focused on Communities Experiencing Disadvantage.
Benjamin Metcalf, Srinivas Nanduri, Sopio Chochua, Yuan Li, Katherine Fleming-Dutra, Lesley McGee, and Bernard Beall
The Journal of infectious diseases 2022
A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV.
Kedibone M Ndlangisa, Mignon du Plessis, Stephanie Lo, Linda de Gouveia, Chrispin Chaguza, Martin Antonio, Brenda Kwambana-Adams, Jennifer Cornick, Dean B Everett, Ron Dagan, Paulina A Hawkins, Bernard Beall, Alejandra Corso, Samanta Cristine Grassi Almeida, Theresa J Ochoa, Stephen Obaro, Sadia Shakoor, Eric S Donkor, Rebecca A Gladstone, Pak Leung Ho, Metka Paragi, Sanjay Doiphode, Somporn Srifuengfung, Rebecca Ford, Jennifer Moïsi, Samir K Saha, Godfrey Bigogo, Betuel Sigauque, Özgen Köseoglu Eser, Naima Elmdaghri, Leonid Titov, Paul Turner, K L Ravi Kumar, Rama Kandasamy, Ekaterina Egorova, Margaret Ip, Robert F Breiman, Keith P Klugman, Lesley McGee, Stephen D Bentley, Anne von Gottberg, and The Global Pneumococcal Sequencing Consortium
Microbial genomics 2022 8(4)
Invasive pneumococcal disease clusters disproportionally impact persons experiencing homelessness, injecting drug users, and the western United States.
Bernard Beall, Sopio Chochua, Zhongya Li, Theresa Tran, Jasmine Varghese, Lesley McGee, Yuan Li, and Benjamin Metcalf
The Journal of infectious diseases 2022
Genomic Characterization of Group A Streptococci Causing Pharyngitis and Invasive Disease in Colorado, USA, June 2016 - April 2017.
Yuan Li, Samuel Dominguez, Srinivas A Nanduri, Joy Rivers, Saundra Mathis, Zhongya Li, Lesley McGee, Sopio Chochua, Benjamin J Metcalf, Chris A Van Beneden, Bernard Beall, and Lisa Miller
The Journal of infectious diseases 2021
Genomic Surveillance of Streptococcus pyogenes Strains Causing Invasive Disease, United States, 2016-2017.
Yuan Li, Joy Rivers, Saundra Mathis, Zhongya Li, Srinivasan Velusamy, Srinivas A Nanduri, Chris A Van Beneden, Paula Snippes-Vagnone, Ruth Lynfield, Lesley McGee, Sopio Chochua, Benjamin J Metcalf, and Bernard Beall
Frontiers in microbiology 2020 111547
Streptococcus pneumoniae serotypes that frequently colonise the human nasopharynx are common recipients of penicillin-binding protein gene fragments from Streptococcus mitis.
Akuzike Kalizang'oma, Chrispin Chaguza, Andrea Gori, Charlotte Davison, Sandra Beleza, Martin Antonio, Bernard Beall, David Goldblatt, Brenda Kwambana-Adams, Stephen D Bentley, and Robert S Heyderman
Microbial genomics 2021 7(9)
The role of interspecies recombinations in the evolution of antibiotic resistant pneumococci.
Joshua Charles D'Aeth, Mark P G van der Linden, Lesley McGee, Herminia de Lencastre, Paul Turner, Jae-Hoon Song, Stephanie W Lo, Rebecca A Gladstone, Raquel Sa-Leao, Kwan Soo Ko, William P Hanage, Robert F Breiman, Bernard Beall, Stephen D Bentley, Nicholas J Croucher, and
eLife 2021 10
Patterns of antibiotic nonsusceptibility among invasive group A Streptococcus infections-United States, 2006-2017.
Katherine Fay, Jennifer Onukwube, Sopio Chochua, William Schaffner, Paul Cieslak, Ruth Lynfield, Alison Muse, Chad Smelser, Lee H Harrison, Monica Farley, Susan Petit, Nisha Alden, Mirasol Apostal, Paula Snippes Vagnone, Srinivas Nanduri, Bernard Beall, and Chris A Van Beneden
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021
Serotype-Switch Variant of Multidrug-Resistant Streptococcus pneumoniae Sequence Type 271.
Erin M Scherer, Bernard Beall, and Benjamin Metcalf
Emerging infectious diseases 2021 27(6) 1689-1692
Features of Streptococcus agalactiae strains recovered from pregnant women and newborns attending different hospitals in Ethiopia.
Musa Mohammed Ali, Yimtubezinash Woldeamanuel, Daniel Asrat, Demissie Assegu Fenta, Bernard Beall, Stephanie Schrag, and Lesley McGee
BMC infectious diseases 2020 Nov 20(1) 848
Invasive pneumococcal strain distributions and isolate clusters associated with persons experiencing homelessness during 2018.
Benjamin J Metcalf, Sopio Chochua, Hollis Walker, Theresa Tran, Zhongya Li, Jasmine Varghese, Paula M Snippes Vagnone, Ruth Lynfield, Lesley McGee, Yuan Li, Tamara Pilishvili, and Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Nov
Sequential quadriplex real-time PCR for identifying 20 common emm types of Group A Streptococcus .
Srinivasan Velusamy, Katherine Jordak, Madeline Kupor, Sopio Chochua, Lesley McGee, and Bernard Beall
Journal of clinical microbiology 2020 Oct
Upsurge of conjugate vaccine serotype 4 invasive pneumococcal disease clusters among adults experiencing homelessness in California, Colorado, and New Mexico.
Bernard Beall, Hollis Walker, Theresa Tran, Zhongya Li, Jasmine Varghese, Lesley McGee, Yuan Li, Benjamin J Metcalf, Ryan Gierke, Emily Mosites, Sopio Chochua, and Tamara Pilishvili
The Journal of infectious diseases 2020 Aug
Sequential triplex real-time PCR assay for detecting 21 pneumococcal capsular serotypes that account for a high global disease burden.
Fabiana C Pimenta, Alexis Roundtree, Ahmet Soysal, Mustafa Bakir, Mignon du Plessis, Nicole Wolter, Anne von Gottberg, Lesley McGee, Maria da Gloria Carvalho, and Bernard Beall
Journal of clinical microbiology 2013 Feb 51(2) 647-52
Analysis of Global Collection of Group A Streptococcus Genomes Reveals that the Majority Encode a Trio of M and M-Like Proteins.
Hannah R Frost, Mark R Davies, Valérie Delforge, Dalila Lakhloufi, Martina Sanderson-Smith, Velusamy Srinivasan, Andrew C Steer, Mark J Walker, Bernard Beall, Anne Botteaux, and Pierre R Smeesters
mSphere 2020 Jan 5(1)
A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa.
Stephanie W Lo, Rebecca A Gladstone, Andries J van Tonder, Mignon du Plessis, Jennifer E Cornick, Paulina A Hawkins, Shabir A Madhi, Susan A Nzenze, Rama Kandasamy, K L Ravikumar, Naima Elmdaghri, Brenda Kwambana-Adams, Samanta Cristine Grassi Almeida, Anna Skoczynska, Ekaterina Egorova, Leonid Titov, Samir K Saha, Metka Paragi, Dean B Everett, Martin Antonio, Keith P Klugman, Yuan Li, Benjamin J Metcalf, Bernard Beall, Lesley McGee, Robert F Breiman, Stephen D Bentley, Anne von Gottberg, and
The Journal of antimicrobial chemotherapy 2019 Dec
Streptococcus pyogenes pbp2x Mutation Confers Reduced Susceptibility to β-lactam antibiotics.
Kirsten Vannice, Jessica Ricaldi, Srinivas Nanduri, Ferric C Fang, John Lynch, Chloe Bryson-Cahn, Theodore Wright, Jeff Duchin, Meagan Kay, Sopio Chochua, Chris Van Beneden, and Bernard Beall
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2019 Oct
Multistate population and whole genome sequence based strain surveillance of invasive pneumococci recovered in the United States during 2017.
Jasmine Varghese, Sopio Chochua, Theresa Tran, Hollis Walker, Zhongya Li, Paula M Snippes Vagnone, Ruth Lynfield, Lesley McGee, Yuan Li, Benjamin Metcalf, Tamara Pilishvili, and Bernard Beall
Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2019 Sep
Increase in Invasive Group A Streptococcal Disease and Emergence of Mucoid Strains in a Pediatric Population: February-June 2017.
Lorne W Walker, Lindsay Montoya, Sopio Chochua, Bernard Beall, and Michael Green
Open forum infectious diseases 2019 Jul (7) ofz275
Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018.
Sopio Chochua, Joy Rivers, Saundra Mathis, Zhongya Li, Srinivasan Velusamy, Lesley McGee, Chris Van Beneden, Yuan Li, Benjamin J Metcalf, and Bernard Beall
Emerging infectious diseases 2019 Aug (8)
Streptococcus infantis, Streptococcus mitis , and Streptococcus oralis Strains With Highly Similar cps5 Loci and Antigenic Relatedness to Serotype 5 Pneumococci.
Fabiana Pimenta, Robert E Gertz, So Hee Park, Ellie Kim, Iaci Moura, Jennifer Milucky, Nadine Rouphael, Monica M Farley, Lee H Harrison, Nancy M Bennett, Godfrey Bigogo, Daniel R Feikin, Robert Breiman, Fernanda C Lessa, Cynthia G Whitney, Gowrisankar Rajam, Jarad Schiffer, Maria da Gloria Carvalho, and Bernard Beall
Frontiers in microbiology 2018 3199
Streptococcus mitis Expressing Pneumococcal Serotype 1 Capsule.
Fernanda C Lessa, Jennifer Milucky, Nadine G Rouphael, Nancy M Bennett, H Keipp Talbot, Lee H Harrison, Monica M Farley, Jeremy Walston, Fabiana Pimenta, Robert E Gertz, Gowrisankar Rajam, Maria da Gloria Carvalho, Bernard Beall, and Cynthia G Whitney
Scientific reports 2018 Dec (1) 17959
A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016.
Bernard Beall, Sopio Chochua, Robert E Gertz, Yuan Li, Zhongya Li, Lesley McGee, Benjamin J Metcalf, Jessica Ricaldi, Theresa Tran, Hollis Walker, and Tamara Pilishvili
Frontiers in microbiology 2018 92670
Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci.
Taj Azarian, Patrick K Mitchell, Maria Georgieva, Claudette M Thompson, Amel Ghouila, Andrew J Pollard, Anne von Gottberg, Mignon du Plessis, Martin Antonio, Brenda A Kwambana-Adams, Stuart C Clarke, Dean Everett, Jennifer Cornick, Ewa Sadowy, Waleria Hryniewicz, Anna Skoczynska, Jennifer C Moïsi, Lesley McGee, Bernard Beall, Benjamin J Metcalf, Robert F Breiman, P L Ho, Raymond Reid, Katherine L O'Brien, Rebecca A Gladstone, Stephen D Bentley, and William P Hanage
PLoS pathogens 2018 Nov 14(11) e1007438
Outbreak of invasive infections from subtype emm26.3 group A Streptococcus among homeless adults-Anchorage, Alaska, 2016-2017.
Emily Mosites, Anna Frick, Prabhu Gounder, Louisa Castrodale, Yuan Li, Karen Rudolph, Debby Hurlburt, Kristen D Lecy, Tammy Zulz, Tolu Adebanjo, Jennifer Onukwube, Bernard Beall, Chris A Van Beneden, Thomas Hennessy, Joseph McLaughlin, and Michael G Bruce
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2017 Oct
Population and Whole Genome Sequence Based Characterization of Invasive Group A Streptococci Recovered in the United States during 2015.
Sopio Chochua, Ben J Metcalf, Zhongya Li, Joy Rivers, Saundra Mathis, Delois Jackson, Robert E Gertz, Velusamy Srinivasan, Ruth Lynfield, Chris Van Beneden, Lesley McGee, and Bernard Beall
mBio 2017 Sep (5)
Key features of invasive pneumococcal isolates recovered in Lima, Peru determined through whole genome sequencing.
Paulina Hawkins, Erik Mercado, Sopio Chochua, Maria E Castillo, Isabel Reyes, Eduardo Chaparro, Rebecca Gladstone, Stephen D Bentley, Robert F Breiman, Benjamin J Metcalf, Bernard Beall, Theresa J Ochoa, and Lesley McGee
International journal of medical microbiology : IJMM 2017 Jul
Invasive Serotype 35B Pneumococci Including an Expanding Serotype Switch Lineage, United States, 2015-2016.
Sopio Chochua, Benjamin J Metcalf, Zhongya Li, Hollis Walker, Theresa Tran, Lesley McGee, and Bernard Beall
Emerging infectious diseases 2017 06 (6) 922-930
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