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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jan 27, 2023. (Total: 4182 publications since 2011)
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Records 1-26 (of 26 Records)
Query Trace: all>>Christopher A Gulvik[CDC Author]
Benchmark datasets for SARS-CoV-2 surveillance bioinformatics.
Lingzi Xiaoli, Jill V Hagey, Daniel J Park, Christopher A Gulvik, Erin L Young, Nabil-Fareed Alikhan, Adrian Lawsin, Norman Hassell, Kristen Knipe, Kelly F Oakeson, Adam C Retchless, Migun Shakya, Chien-Chi Lo, Patrick Chain, Andrew J Page, Benjamin J Metcalf, Michelle Su, Jessica Rowell, Eshaw Vidyaprakash, Clinton R Paden, Andrew D Huang, Dawn Roellig, Ketan Patel, Kathryn Winglee, Michael R Weigand, and Lee S Katz
PeerJ 2022 10e13821
Strains Associated with Two 2020 Welder Anthrax Cases in the United States Belong to Separate Lineages within Bacillus cereus sensu lato.
Laura M Carroll, Chung K Marston, Cari B Kolton, Christopher A Gulvik, Jay E Gee, Zachary P Weiner, and Jasna Kovac
Pathogens (Basel, Switzerland) 2022 11(8)
Epidemiologic Investigation of Two Welder's Anthrax Cases Caused by Bacillus Cereus Group Bacteria: Occupational Link Established by Environmental Detection.
Patrick Dawson, Johanna S Salzer, Caroline A Schrodt, Karl Feldmann, Cari B Kolton, Jay E Gee, Chung K Marston, Christopher A Gulvik, Mindy G Elrod, Aaron Villarma, Rita M Traxler, María E Negrón, Kate A Hendricks, Heather Moulton-Meissner, Laura J Rose, Paul Byers, Kathryn Taylor, Daphne Ware, Gary A Balsamo, Theresa Sokol, Bret Barrett, Erica Payne, Saad Zaheer, Ga On Jung, Stephen Long, Ricardo Quijano, Lindsey LeBouf, Briana O'Sullivan, Erin Swaney, James M Antonini, Marie A de Perio, Zachary Weiner, William A Bower, and Alex R Hoffmaster
Pathogens (Basel, Switzerland) 2022 11(8)
In silico analyses of penicillin binding proteins in Burkholderia pseudomallei uncovers SNPs with utility for phylogeography, species differentiation, and sequence typing.
Heather P McLaughlin, Christopher A Gulvik, and David Sue
PLoS neglected tropical diseases 2022 16(4) e0009882
Software testing in microbial bioinformatics: a call to action.
Boas C L van der Putten, C I Mendes, Brooke M Talbot, Jolinda de Korne-Elenbaas, Rafael Mamede, Pedro Vila-Cerqueira, Luis Pedro Coelho, Christopher A Gulvik, Lee S Katz, and The Asm Ngs Hackathon Participants
Microbial genomics 2022 8(3)
Multistate Outbreak of Melioidosis Associated with Imported Aromatherapy Spray.
Jay E Gee, William A Bower, Amber Kunkel, Julia Petras, Jenna Gettings, Maria Bye, Melanie Firestone, Mindy G Elrod, Lindy Liu, David D Blaney, Allison Zaldivar, Chelsea Raybern, Farah S Ahmed, Heidi Honza, Shelley Stonecipher, Briana J O'Sullivan, Ruth Lynfield, Melissa Hunter, Skyler Brennan, Jessica Pavlick, Julie Gabel, Cherie Drenzek, Rachel Geller, Crystal Lee, Jana M Ritter, Sherif R Zaki, Christopher A Gulvik, W Wyatt Wilson, Elizabeth Beshearse, Bart J Currie, Jessica R Webb, Zachary P Weiner, María E Negrón, and Alex R Hoffmaster
The New England journal of medicine 2022 386(9) 861-868
Notes from the Field: Fatal Anthrax Pneumonia in Welders and Other Metalworkers Caused by Bacillus cereus Group Bacteria Containing Anthrax Toxin Genes - U.S. Gulf Coast States, 1994-2020.
Patrick Dawson, Caroline A Schrodt, Karl Feldmann, Rita M Traxler, Jay E Gee, Cari B Kolton, Chung K Marston, Christopher A Gulvik, James M Antonini, María E Negrón, John R McQuiston, Kate Hendricks, Zachary Weiner, Gary A Balsamo, Theresa Sokol, Paul Byers, Kathryn Taylor, Saad Zaheer, Stephen Long, Briana O'Sullivan, Marie A de Perio, Alex R Hoffmaster, Johanna S Salzer, and William A Bower
MMWR. Morbidity and mortality weekly report 2021 70(41) 1453-1454
Complete Genome Sequence of Rhodococcus sp. Strain W8901, a Human Clinical Specimen, Assembled Using MiSeq and MinION Sequence Data.
Christopher A Gulvik, Dhwani Batra, Dakota T Howard, Milli Sheth, Ben W Humrighouse, Justin Lee, John R McQuiston, and Brent A Lasker
Microbiology resource announcements 2021 10(35) e0061321
Complete and Circularized Bacterial Genome Sequence of Gordonia sp. Strain X0973
Christopher A Gulvik, Dhwani Batra, Lori A Rowe, Milli Sheth, Sarah Nobles, Justin S Lee, John R McQuiston, and Brent A Lasker
Microbiology resource announcements 2021 10(9)
A real-time multiplex PCR assay for detection of the causative agents of rat bite fever, Streptobacillus moniliformis and zoonoticStreptobacillus species.
Aubree J Kelly, Melissa L Ivey, Christopher A Gulvik, Ben W Humrighouse, and John R McQuiston
Diagnostic microbiology and infectious disease 2021 100(2) 115335
Genomic Diversity of Burkholderia pseudomallei in Ceara, Brazil.
Jay E Gee, Christopher A Gulvik, Debora S C M Castelo-Branco, José J C Sidrim, Marcos F G Rocha, Rossana A Cordeiro, Raimunda S N Brilhante, Tereza J P G Bandeira, Iracema Patrício, Lucas P Alencar, Ana Karoline da Costa Ribeiro, Mili Sheth, Mark A Deka, Alex R Hoffmaster, and Dionne Rolim
mSphere 2021 6(1)
Genomic Diversity of Burkholderia pseudomallei Isolates, Colombia.
Carolina Duarte, Franco Montufar, Jaime Moreno, Dora Sánchez, Jose Yesid Rodríguez, Alfredo G Torres, Soraya Morales, Adriana Bautista, Mónica G Huertas, Julia N Myers, Christopher A Gulvik, Mindy G Elrod, David D Blaney, and Jay E Gee
Emerging infectious diseases 2021 27(2) 655-658
Complete and Circularized Genome Assemblies of the Kroppenstedtia eburnea Genus Type Strain and the Kroppenstedtia pulmonis Species Type Strain with MiSeq and MinION Sequence Data.
Christopher A Gulvik, Dhwani Batra, Lori A Rowe, Milli Sheth, Ben W Humrighouse, Dakota T Howard, Justin Lee, John R McQuiston, and Brent A Lasker
Microbiology resource announcements 2020 Oct 9(44)
Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas , eleven species to the genus Kaistella , and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens.
Ainsley C Nicholson, Christopher A Gulvik, Anne M Whitney, Ben W Humrighouse, Melissa E Bell, Barry Holmes, Arnie G Steigerwalt, Aaron Villarma, Mili Sheth, Dhwani Batra, Lori A Rowe, Mark Burroughs, Jessica C Pryor, Jean-François Bernardet, Celia Hugo, Peter Kämpfer, Jeffrey D Newman, and John R McQuiston
International journal of systematic and evolutionary microbiology 2020 Jan
Vagococcus bubulae sp. nov., isolated from ground beef, and Vagococcus vulneris sp. nov., isolated from a human foot wound.
Patricia L Shewmaker, Anne M Whitney, Christopher A Gulvik, Ben W Humrighouse, Jarrett Gartin, Hercules Moura, John R Barr, Edward R B Moore, Roger Karlsson, Tatiana C A Pinto, and Lucia M Teixeira
International journal of systematic and evolutionary microbiology 2019 May
Streptacidiphilus bronchialis sp. nov., a ciprofloxacin-resistant bacterium from a human clinical specimen; reclassification of Streptomyces griseoplanus as Streptacidiphilus griseoplanus comb. nov. and emended description of the genus Streptacidiphilus.
Imen Nouioui, Hans-Peter Klenk, José Mariano Igual, Christopher A Gulvik, Brent A Lasker, and John R McQuiston
International journal of systematic and evolutionary microbiology 2019 Apr 69(4) 1047-1056
Complete Genome Sequence of Nocardia farcinica W6977 T Obtained by Combining Illumina and PacBio Reads.
Christopher A Gulvik, Robert A Arthur, Ben W Humrighouse, Dhwani Batra, Lori A Rowe, Brent A Lasker, and John R McQuiston
Microbiology resource announcements 2019 Jan (3)
A real-time multiplex PCR assay for detection of Elizabethkingia species, and differentiating between E. anophelis and E. meningoseptica .
Aubree J Kelly, Sandor E Karpathy, Christopher A Gulvik, Melissa L Ivey, Anne M Whitney, Melissa E Bell, Ainsley C Nicholson, Ben H Humrighouse, and John R McQuiston
Journal of clinical microbiology 2019 Jan
Genotypic differences between strains of the opportunistic pathogen Corynebacterium bovis isolated from humans, cows, and rodents.
Christopher Cheleuitte-Nieves, Christopher A Gulvik, John R McQuiston, Ben W Humrighouse, Melissa E Bell, Aaron Villarma, Vincent A Fischetti, Lars F Westblade, and Neil S Lipman
PloS one 2018 (12) e0209231
Complete Genome Sequence of Streptacidiphilus sp. Strain 15-057A, Obtained from Bronchial Lavage Fluid.
Robert A Arthur, Christopher A Gulvik, Ben W Humrighouse, Brent A Lasker, Dhwani Batra, Lori A Rowe, José Mariano Igual, Imen Nouioui, Hans-Peter Klenk, and John R McQuiston
Microbiology resource announcements 2018 Nov 7(19)
Genomic Characterization and Copy Number Variation of Bacillus anthracis Plasmids pXO1 and pXO2 in a Historical Collection of 412 Strains.
Angela Pena-Gonzalez, Luis M Rodriguez-R, Chung K Marston, Jay E Gee, Christopher A Gulvik, Cari B Kolton, Elke Saile, Michael Frace, Alex R Hoffmaster, and Konstantinos T Konstantinidis
mSystems (4)
Draft Reference Genome Sequence of Corynebacterium mastitidis 16-1433, Isolated From a Mouse
Christopher Cheleuitte-Nieves, Christopher A Gulvik, Ben W Humrighouse, Melissa E Bell, Aaron Villarma, Lars F Westblade, Neil S Lipman, Vincent A Fischetti, and John R McQuiston
Genome announcements 2018 Feb 6(7)
Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus.
Aaron Villarma, Christopher A Gulvik, Lori A Rowe, Mili Sheth, Phalasy Juieng, Ainsley C Nicholson, Vladimir N Loparev, and John R McQuiston
Genome announcements 2017 Nov (44)
Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov.
Ainsley C Nicholson, Christopher A Gulvik, Anne M Whitney, Ben W Humrighouse, James Graziano, Brian Emery, Melissa Bell, Vladimir Loparev, Phalasy Juieng, Jarrett Gartin, Chantal Bizet, Dominique Clermont, Alexis Criscuolo, Sylvain Brisse, and John R McQuiston
Antonie van Leeuwenhoek 2017 Aug
Phylogeography of Burkholderia pseudomallei Isolates, Western Hemisphere.
Jay E Gee, Christopher A Gulvik, Mindy G Elrod, Dhwani Batra, Lori A Rowe, Mili Sheth, and Alex R Hoffmaster
Emerging infectious diseases 2017 Jul 23(7) 1133-1138
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain.
Amandine Perrin, Elise Larsonneur, Ainsley C Nicholson, David J Edwards, Kristin M Gundlach, Anne M Whitney, Christopher A Gulvik, Melissa E Bell, Olaya Rendueles, Jean Cury, Perrine Hugon, Dominique Clermont, Vincent Enouf, Vladimir Loparev, Phalasy Juieng, Timothy Monson, David Warshauer, Lina I Elbadawi, Maroya Spalding Walters, Matthew B Crist, Judith Noble-Wang, Gwen Borlaug, Eduardo P C Rocha, Alexis Criscuolo, Marie Touchon, Jeffrey P Davis, Kathryn E Holt, John R McQuiston, and Sylvain Brisse
Nature communications 2017 May 15483
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