CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Jun 02, 2023. (Total: 4301 publications since 2011)

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Records 1-26 (of 26 Records)

Query Trace: all>>Christopher A Gulvik[CDC Author]
Benchmark datasets for SARS-CoV-2 surveillance bioinformatics. Xiaoli L , Hagey JV , Park DJ , Gulvik CA , Young EL , Alikhan NF , Lawsin A , Hassell N , Knipe K , Oakeson KF , Retchless AC , Shakya M , Lo CC , Chain P , Page AJ , Metcalf BJ , Su M , Rowell J , Vidyaprakash E , Paden CR , Huang AD , Roellig D , Patel K , Winglee K , Weigand MR , Katz LS . PeerJ 2022 10 e13821
Strains Associated with Two 2020 Welder Anthrax Cases in the United States Belong to Separate Lineages within Bacillus cereus sensu lato. Carroll LM , Marston CK , Kolton CB , Gulvik CA , Gee JE , Weiner ZP , Kovac J . Pathogens 2022 11 (8)
Epidemiologic Investigation of Two Welder's Anthrax Cases Caused by Bacillus Cereus Group Bacteria: Occupational Link Established by Environmental Detection. Dawson P , Salzer JS , Schrodt CA , Feldmann K , Kolton CB , Gee JE , Marston CK , Gulvik CA , Elrod MG , Villarma A , Traxler RM , Negrn ME , Hendricks KA , Moulton-Meissner H , Rose LJ , Byers P , Taylor K , Ware D , Balsamo GA , Sokol T , Barrett B , Payne E , Zaheer S , Jung GO , Long S , Quijano R , LeBouf L , O'Sullivan B , Swaney E , Antonini JM , Perio MA , Weiner Z , Bower WA , Hoffmaster AR . Pathogens 2022 11 (8)
In silico analyses of penicillin binding proteins in Burkholderia pseudomallei uncovers SNPs with utility for phylogeography, species differentiation, and sequence typing. Mclaughlin HP , Gulvik CA , Sue D . PLoS Negl Trop Dis 2022 16 (4) e0009882
Software testing in microbial bioinformatics: a call to action. vanderPutten BCL , Mendes CI , Talbot BM , deKorne-Elenbaas J , Mamede R , Vila-Cerqueira P , Coelho LP , Gulvik CA , Katz LS , TheAsmNgsHackathon Participants . Microb Genom 2022 8 (3)
Multistate Outbreak of Melioidosis Associated with Imported Aromatherapy Spray. Gee JE , Bower WA , Kunkel A , Petras J , Gettings J , Bye M , Firestone M , Elrod MG , Liu L , Blaney DD , Zaldivar A , Raybern C , Ahmed FS , Honza H , Stonecipher S , O'Sullivan BJ , Lynfield R , Hunter M , Brennan S , Pavlick J , Gabel J , Drenzek C , Geller R , Lee C , Ritter JM , Zaki SR , Gulvik CA , Wilson WW , Beshearse E , Currie BJ , Webb JR , Weiner ZP , Negrn ME , Hoffmaster AR . N Engl J Med 2022 386 (9) 861-868
Notes from the Field: Fatal Anthrax Pneumonia in Welders and Other Metalworkers Caused by Bacillus cereus Group Bacteria Containing Anthrax Toxin Genes - U.S. Gulf Coast States, 1994-2020. Dawson P , Schrodt CA , Feldmann K , Traxler RM , Gee JE , Kolton CB , Marston CK , Gulvik CA , Antonini JM , Negrn ME , McQuiston JR , Hendricks K , Weiner Z , Balsamo GA , Sokol T , Byers P , Taylor K , Zaheer S , Long S , O'Sullivan B , dePerio MA , Hoffmaster AR , Salzer JS , Bower WA . MMWR Morb Mortal Wkly Rep 2021 70 (41) 1453-1454
Complete Genome Sequence of Rhodococcus sp. Strain W8901, a Human Clinical Specimen, Assembled Using MiSeq and MinION Sequence Data. Gulvik CA , Batra D , Howard DT , Sheth M , Humrighouse BW , Lee J , McQuiston JR , Lasker BA . Microbiol Resour Announc 2021 10 (35) e0061321
Complete and Circularized Bacterial Genome Sequence of Gordonia sp. Strain X0973 Gulvik CA , Batra D , Rowe LA , Sheth M , Nobles S , Lee JS , McQuiston JR , Lasker BA . Microbiol Resour Announc 2021 10 (9)
A real-time multiplex PCR assay for detection of the causative agents of rat bite fever, Streptobacillus moniliformis and zoonoticStreptobacillus species. Kelly AJ , Ivey ML , Gulvik CA , Humrighouse BW , McQuiston JR . Diagn Microbiol Infect Dis 2021 100 (2) 115335
Genomic Diversity of Burkholderia pseudomallei Isolates, Colombia. Duarte C , Montufar F , Moreno J , Snchez D , Rodrguez JY , Torres AG , Morales S , Bautista A , Huertas MG , Myers JN , Gulvik CA , Elrod MG , Blaney DD , Gee JE . Emerg Infect Dis 2021 27 (2) 655-658
Genomic Diversity of Burkholderia pseudomallei in Ceara, Brazil. Gee JE , Gulvik CA , Castelo-Branco Dscm , Sidrim JJC , Rocha MFG , Cordeiro RA , Brilhante RSN , Bandeira Tjpg , Patrcio I , Alencar LP , daCostaRibeiro AK , Sheth M , Deka MA , Hoffmaster AR , Rolim D . mSphere 2021 6 (1)
Complete and Circularized Genome Assemblies of the Kroppenstedtia eburnea Genus Type Strain and the Kroppenstedtia pulmonis Species Type Strain with MiSeq and MinION Sequence Data. Gulvik CA , Batra D , Rowe LA , Sheth M , Humrighouse BW , Howard DT , Lee J , McQuiston JR , Lasker BA . Microbiol Resour Announc 2020 9 (44)
Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas , eleven species to the genus Kaistella , and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens. Nicholson AC , Gulvik CA , Whitney AM , Humrighouse BW , Bell ME , Holmes B , Steigerwalt AG , Villarma A , Sheth M , Batra D , Rowe LA , Burroughs M , Pryor JC , Bernardet JF , Hugo C , Kmpfer P , Newman JD , McQuiston JR . Int J Syst Evol Microbiol 2020 70 (8) 4432-4450
Vagococcus bubulae sp. nov., isolated from ground beef, and Vagococcus vulneris sp. nov., isolated from a human foot wound. Shewmaker PL , Whitney AM , Gulvik CA , Humrighouse BW , Gartin J , Moura H , Barr JR , Moore ERB , Karlsson R , Pinto TCA , Teixeira LM . Int J Syst Evol Microbiol 2019 69 (8) 2268-2276
Streptacidiphilus bronchialis sp. nov., a ciprofloxacin-resistant bacterium from a human clinical specimen; reclassification of Streptomyces griseoplanus as Streptacidiphilus griseoplanus comb. nov. and emended description of the genus Streptacidiphilus. Nouioui I , Klenk HP , Igual JM , Gulvik CA , Lasker BA , McQuiston JR . Int J Syst Evol Microbiol 2019 69 (4) 1047-1056
Complete Genome Sequence of Nocardia farcinica W6977 T Obtained by Combining Illumina and PacBio Reads. Gulvik CA , Arthur RA , Humrighouse BW , Batra D , Rowe LA , Lasker BA , McQuiston JR . Microbiol Resour Announc 2019 8 (3)
A real-time multiplex PCR assay for detection of Elizabethkingia species, and differentiating between E. anophelis and E. meningoseptica . Kelly AJ , Karpathy SE , Gulvik CA , Ivey ML , Whitney AM , Bell ME , Nicholson AC , Humrighouse BH , McQuiston JR . J Clin Microbiol 2019 57 (4)
Genotypic differences between strains of the opportunistic pathogen Corynebacterium bovis isolated from humans, cows, and rodents. Cheleuitte-Nieves C , Gulvik CA , McQuiston JR , Humrighouse BW , Bell ME , Villarma A , Fischetti VA , Westblade LF , Lipman NS . PLoS One 2018 13 (12) e0209231
Complete Genome Sequence of Streptacidiphilus sp. Strain 15-057A, Obtained from Bronchial Lavage Fluid. Arthur RA , Gulvik CA , Humrighouse BW , Lasker BA , Batra D , Rowe LA , Igual JM , Nouioui I , Klenk HP , McQuiston JR . Microbiol Resour Announc 2018 7 (19)
Genomic Characterization and Copy Number Variation of Bacillus anthracis Plasmids pXO1 and pXO2 in a Historical Collection of 412 Strains. Pena-Gonzalez A , Rodriguez RLm , Marston CK , Gee JE , Gulvik CA , Kolton CB , Saile E , Frace M , Hoffmaster AR , Konstantinidis KT . mSystems 2018 3 (4)
Draft Reference Genome Sequence of Corynebacterium mastitidis 16-1433, Isolated From a Mouse Cheleuitte-Nieves C , Gulvik CA , Humrighouse BW , Bell ME , Villarma A , Westblade LF , Lipman NS , Fischetti VA , McQuiston JR . Genome Announc 2018 6 (7)
Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus. Villarma Aaron, Gulvik Christopher A, Rowe Lori A, Sheth Mili, Juieng Phalasy, Nicholson Ainsley C, Loparev Vladimir N, McQuiston John R.Genome announcements 2017 Nov (44) . Genome announcements 2017 Nov (44)
Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov. Nicholson Ainsley C, Gulvik Christopher A, Whitney Anne M, Humrighouse Ben W, Graziano James, Emery Brian, Bell Melissa, Loparev Vladimir, Juieng Phalasy, Gartin Jarrett, Bizet Chantal, Clermont Dominique, Criscuolo Alexis, Brisse Sylvain, McQuiston John R.Antonie van Leeuwenhoek 2017 Aug . Antonie van Leeuwenhoek 2017 Aug
Phylogeography of Burkholderia pseudomallei Isolates, Western Hemisphere. Gee Jay E, Gulvik Christopher A, Elrod Mindy G, Batra Dhwani, Rowe Lori A, Sheth Mili, Hoffmaster Alex R. Emerging infectious diseases 2017 Jul 23(7) 1133-1138 . Emerging infectious diseases 2017 Jul 23(7) 1133-1138
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain. Perrin Amandine, Larsonneur Elise, Nicholson Ainsley C, Edwards David J, Gundlach Kristin M, Whitney Anne M, Gulvik Christopher A, Bell Melissa E, Rendueles Olaya, Cury Jean, Hugon Perrine, Clermont Dominique, Enouf Vincent, Loparev Vladimir, Juieng Phalasy, Monson Timothy, Warshauer David, Elbadawi Lina I, Walters Maroya Spalding, Crist Matthew B, Noble-Wang Judith, Borlaug Gwen, Rocha Eduardo P C, Criscuolo Alexis, Touchon Marie, Davis Jeffrey P, Holt Kathryn E, McQuiston John R, Brisse Sylvain.Nature communications 2017 May 15483 . Nature communications 2017 May 15483