CDC-Authored Genomics and Precision Health Publications Database

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Last data update: May 12, 2021. (Total: 3284 publications since 2011)

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Records 1-26 (of 26 Records)

Query Trace: all>>Cara C Burns[CDC Author]
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization. Jennifer L Konopka-Anstadt, Ray Campagnoli, Annelet Vincent, Jing Shaw, Ling Wei, Nhien T Wynn, Shane E Smithee, Erika Bujaki, Ming Te Yeh, Majid Laassri, Tatiana Zagorodnyaya, Amy J Weiner, Konstantin Chumakov, Raul Andino, Andrew MacAdam, Olen Kew, and Cara C Burns NPJ vaccines 2020 Mar 5(1) 26 Similar articles in PubMed DOI:10.1038/s41541-020-0176-7
Updated Characterization of Outbreak Response Strategies for 2019-2029: Impacts of Using a Novel Type 2 Oral Poliovirus Vaccine Strain. Dominika A Kalkowska, Mark A Pallansch, Amanda Wilkinson, Ananda S Bandyopadhyay, Jennifer L Konopka-Anstadt, Cara C Burns, M Steven Oberste, Steven G F Wassilak, Kamran Badizadegan, and Kimberly M Thompson Risk analysis : an official publication of the Society for Risk Analysis 2020 Nov Similar articles in PubMed DOI:10.1111/risa.13622
Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses. Rachel L Marine, Laura C Magaña, Christina J Castro, Kun Zhao, Anna M Montmayeur, Alexander Schmidt, Marta Diez-Valcarce, Terry Fei Fan Ng, Jan Vinjé, Cara C Burns, W Allan Nix, Paul A Rota, and M Steven Oberste Journal of virological methods 2020 Apr 113865 Similar articles in PubMed DOI:10.1016/j.jviromet.2020.113865
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization. Jennifer L Konopka-Anstadt, Ray Campagnoli, Annelet Vincent, Jing Shaw, Ling Wei, Nhien T Wynn, Shane E Smithee, Erika Bujaki, Ming Te Yeh, Majid Laassri, Tatiana Zagorodnyaya, Amy J Weiner, Konstantin Chumakov, Raul Andino, Andrew MacAdam, Olen Kew, and Cara C Burns NPJ vaccines 2020 26 Similar articles in PubMed DOI:10.1038/s41541-020-0176-7
A New Solid Matrix for Preservation of Viral Nucleic Acid from Clinical Specimens at Ambient Temperature. Theresa Cromeans, Jothikumar Narayanan, Jeongsu Lee, Nikail Collins, Cara C Burns, Vincent R Hill, and Jan Vinjé Journal of virological methods 2019 Sep 113732 Similar articles in PubMed DOI:10.1016/j.jviromet.2019.113732
Update on Vaccine-Derived Poliovirus Outbreaks - Democratic Republic of the Congo and Horn of Africa, 2017-2018. Chukwuma Mbaeyi, Mary M Alleman, Derek Ehrhardt, Eric Wiesen, Cara C Burns, Hongmei Liu, Raimi Ewetola, Lerato Seakamela, Rennatus Mdodo, Modjirom Ndoutabe, Pierre Kandolo Wenye, Yogolelo Riziki, Peter Borus, Christopher Kamugisha, and Steven G F Wassilak MMWR. Morbidity and mortality weekly report 2019 Mar (9) 225-230 Similar articles in PubMed DOI:10.15585/mmwr.mm6809a2
PoSE: visualization of patterns of sequence evolution using PAML and MATLAB. Kun Zhao, Elizabeth Henderson, Kelley Bullard, M Steven Oberste, Cara C Burns, and Jaume Jorba BMC bioinformatics 2018 Oct (Suppl 11) 364 Similar articles in PubMed DOI:10.1186/s12859-018-2335-7
Strategic Response to an Outbreak of Circulating Vaccine-Derived Poliovirus Type 2 - Syria, 2017-2018. Chukwuma Mbaeyi, Zubair Mufti Wadood, Thomas Moran, , Fazal Ather, Tasha Stehling-Ariza, Joanna Nikulin, Mohammad Al Safadi, Jane Iber, Laurel Zomahoun, Nidal Abourshaid, Hong Pang, Nikki Collins, Humayun Asghar, Obaid Ul Islam Butt, Cara C Burns, Derek Ehrhardt, and Magdi Sharaf MMWR. Morbidity and mortality weekly report 2018 Jun (24) 690-694 Similar articles in PubMed DOI:10.15585/mmwr.mm6724a5
Dynamics of Evolution of Poliovirus Neutralizing Antigenic Sites and Other Capsid Functional Domains during a Large and Prolonged Outbreak. Jing Shaw, Jaume Jorba, Kun Zhao, Jane Iber, Qi Chen, Festus Adu, Adekunle Adeniji, David Bukbuk, Marycelin Baba, Elizabeth Henderson, Naomi Dybdahl-Sissoko, Sharla Macdonald, William C Weldon, Nicksy Gumede, M Steven Oberste, Olen M Kew, and Cara C Burns Journal of virology 2018 Feb Similar articles in PubMed DOI:10.1128/JVI.01949-17
Are Circulating Type 2 Vaccine-derived Polioviruses (VDPVs) Genetically Distinguishable from Immunodeficiency-associated VDPVs? Kun Zhao, Jaume Jorba, Jing Shaw, Jane Iber, Qi Chen, Kelley Bullard, Olen M Kew, and Cara C Burns Computational and structural biotechnology journal 2017 456-462 Similar articles in PubMed DOI:10.1016/j.csbj.2017.09.004
The role of supplementary environmental surveillance to complement acute flaccid paralysis surveillance for wild poliovirus in Pakistan - 2011-2013. Tori L Cowger, Cara C Burns, Salmaan Sharif, Howard E Gary, Jane Iber, Elizabeth Henderson, Farzana Malik, Syed Sohail Zahoor Zaidi, Shahzad Shaukat, Lubna Rehman, Mark A Pallansch, and Walter A Orenstein PloS one 2017 (7) e0180608 Similar articles in PubMed DOI:10.1371/journal.pone.0180608
High-Throughput Next Generation Sequencing of Polioviruses. Anna M Montmayeur, Terry Fei Fan Ng, Alexander Schmidt, Kun Zhao, Laura Magaña, Jane Iber, Christina J Castro, Qi Chen, Elizabeth Henderson, Edward Ramos, Jing Shaw, Roman L Tatusov, Naomi Dybdahl-Sissoko, Marie Claire Endegue-Zanga, Johnson A Adeniji, M Steven Oberste, and Cara C Burns Journal of clinical microbiology 2016 Dec Similar articles in PubMed DOI:10.1128/JCM.02121-16
Surveillance Systems to Track Progress Toward Polio Eradication - Worldwide, 2014-2015. Cynthia J Snider, Ousmane M Diop, Cara C Burns, Rudolph H Tangermann, and Steven G F Wassilak MMWR. Morbidity and mortality weekly report 2016 (13) 346-51 Similar articles in PubMed DOI:10.15585/mmwr.mm6513a3
Importation and outbreak of wild polioviruses from 2000 to 2014 and interruption of transmission in Cameroon. Marie Claire Endegue-Zanga, Serge Alain Sadeuh-Mba, Jane Iber, Cara C Burns, Nicksy Gumede Moeletsi, Marycelin Baba, David Bukbuk, Francis Delpeyroux, Marcellin Nimpa Mengouo, Maurice Demanou, Guy Vernet, François-Xavier Etoa, and Richard Njouom Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2016 Mar 7918-24 Similar articles in PubMed DOI:10.1016/j.jcv.2016.03.025
Molecular and Phenotypic Characterization of a Highly Evolved Type 2 Vaccine-Derived Poliovirus Isolated from Seawater in Brazil, 2014. Klécia Marília S de Melo Cassemiro, Fernanda M Burlandy, Mikaela R F Barbosa, Qi Chen, Jaume Jorba, Elayse M Hachich, Maria I Z Sato, Cara C Burns, and Edson E da Silva PloS one 2016 (3) e0152251 Similar articles in PubMed DOI:10.1371/journal.pone.0152251
Molecular Properties of Poliovirus Isolates: Nucleotide Sequence Analysis, Typing by PCR and Real-Time RT-PCR. Cara C Burns, David R Kilpatrick, Jane C Iber, Qi Chen, and Olen M Kew Methods in molecular biology (Clifton, N.J.) 2016 177-212 Similar articles in PubMed DOI:10.1007/978-1-4939-3292-4_9
Sabin vaccine reversion in the field: a comprehensive analysis of Sabin-like poliovirus isolates in Nigeria. Michael Famulare, Stewart Chang, Jane Iber, Kun Zhao, Johnson A Adeniji, David Bukbuk, Marycelin Baba, Matthew Behrend, Cara C Burns, and M Steven Oberste Journal of virology 2015 Oct Similar articles in PubMed DOI:10.1128/JVI.01532-15
Update on Vaccine-Derived Polioviruses - Worldwide, January 2014-March 2015. Ousmane M Diop, Cara C Burns, Roland W Sutter, Steven G Wassilak, Olen M Kew, and MMWR Morb. Mortal. Wkly. Rep. 2015 Jun 19. (23) 640-6 Similar articles in PubMed
Field study of fecal excretion as a decision support tool in response to silent reintroduction of wild-type poliovirus 1 into Israel. Jacob Moran-Gilad, Ella Mendelson, Cara C Burns, Ravit Bassal, Michael Gdalevich, Danit Sofer, M Steven Oberste, Lester M Shulman, Ehud Kaliner, Musa Hindiyeh, Musa Hindiye, Orna Mor, Liora Shahar, Jane Iber, Ruth Yishay, Joseph Manor, Boaz Lev, Ronni Gamzu, and Itamar Grotto J. Clin. Virol. 2015 May 6651-5 Similar articles in PubMed DOI:10.1016/j.jcv.2015.03.005
Genetic analysis and characterization of wild poliovirus type 1 during sustained transmission in a population with >95% vaccine coverage, Israel 2013. Lester M Shulman, Javier Martin, Danit Sofer, Cara C Burns, Yossi Manor, Musa Hindiyeh, Eugene Gavrilin, Thomas Wilton, Jacob Moran-Gilad, Ronni Gamzo, Ella Mendelson, Itamar Grotto, , Clin. Infect. Dis. 2015 Apr 1. 60(7) 1057-64 Similar articles in PubMed DOI:10.1093/cid/ciu1136
Development of an efficient entire-capsid-coding-region amplification method for direct detection of poliovirus from stool extracts. Minetaro Arita, David R Kilpatrick, Tomofumi Nakamura, Cara C Burns, David Bukbuk, Soji B Oderinde, M Steven Oberste, Olen M Kew, Mark A Pallansch, and Hiroyuki Shimizu J. Clin. Microbiol. 2015 Jan 53(1) 73-8 Similar articles in PubMed DOI:10.1128/JCM.02384-14
Vaccine-derived polioviruses. Cara C Burns, Ousmane M Diop, Roland W Sutter, and Olen M Kew The Journal of infectious diseases 2014 Nov S283-93 Similar articles in PubMed DOI:10.1093/infdis/jiu295
Environmental surveillance for polioviruses in the Global Polio Eradication Initiative. Humayun Asghar, Ousmane M Diop, Goitom Weldegebriel, Farzana Malik, Sushmitha Shetty, Laila El Bassioni, Adefunke O Akande, Eman Al Maamoun, Sohail Zaidi, Adekunle J Adeniji, Cara C Burns, Jagadish Deshpande, M Steve Oberste, and Sara A Lowther The Journal of infectious diseases 2014 Nov S294-303 Similar articles in PubMed DOI:10.1093/infdis/jiu384
Phylogeny of imported and reestablished wild polioviruses in theDemocratic Republic of the Congo from 2006 to 2011. Nicksy Gumede, Jaume Jorba, Jagadish Deshpande, Mark Pallansch, Riziki Yogolelo, Jean Jacques Muyembe-Tamfum, Olen Kew, Marietjie Venter, and Cara C Burns J. Infect. Dis. 2014 Nov 1. 210 Suppl 1S361-7 Similar articles in PubMed DOI:10.1093/infdis/jiu375
Detection of vaccine-derived polioviruses in Mexico using environmental surveillance. Alejandra Esteves-Jaramillo, Concepción F Estívariz, Silvia Peñaranda, Vesta L Richardson, Jesús Reyna, Diana L Coronel, Veronica Carrión, Jose M Landaverde, Steven G F Wassilak, Elda E Pérez-Sánchez, Irma López-Martínez, Cara C Burns, and Mark A Pallansch J. Infect. Dis. 2014 Nov 1. 210 Suppl 1S315-23 Similar articles in PubMed DOI:10.1093/infdis/jiu183
Poliovirus serotype-specific VP1 sequencing primers. David R Kilpatrick, Jane C Iber, Qi Chen, Karen Ching, Su-Ju Yang, Lina De, Mark D Mandelbaum, Brian Emery, Ray Campagnoli, Cara C Burns, and Olen Kew Journal of virological methods 2011 Jun 174(1-2) 128-30 Similar articles in PubMed DOI:10.1016/j.jviromet.2011.03.020