CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Oct 05, 2022. (Total: 4040 publications since 2011)

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Records 1-30 (of 34 Records)

Query Trace: all>>Cara C Burns[CDC Author]
Novel Network Method Major Minor Variation Clustering Enables Identification of Poliovirus Clusters with High-Resolution Linkages. Jiahui Tan, Yutong Zhao, Cara C Burns, Dechao Tian, and Kun Zhao Journal of computational biology : a journal of computational molecular cell biology 2022 Similar articles in PubMed DOI:10.1089/cmb.2022.0292
Exogenous Rubella Virus Capsid Proteins Enhance Virus Genome Replication. Min-Hsin Chen, Cara C Burns, Emily Abernathy, Adaeze A Ogee-Nwankwo, and Joseph P Icenogle Pathogens (Basel, Switzerland) 2022 11(6) Similar articles in PubMed DOI:10.3390/pathogens11060683
Evaluating stability of attenuated Sabin and two novel type 2 oral poliovirus vaccines in children. Rahnuma Wahid, Laina Mercer, Chris Gast, Tirza De Leon, Xavier Sáez-Llorens, Alan Fix, Andrew MacAdam, Laura Stephens, Konstantin Chumakov, Saskia L Smits, Marta Murreddu, Jennifer L Konopka-Anstadt, M Steven Oberste, Cara C Burns, Raul Andino, Novilia Sjafri Bachtiar, Erman Tritama, Ananda S Bandyopadhyay, Gabriela Aguirre, Ricardo Rüttimann, and John O Konz NPJ vaccines 2022 7(1) 19 Similar articles in PubMed DOI:10.1038/s41541-022-00437-5
Editorial: Codon Usage and Dinucleotide Composition of Virus Genomes: From the Virus-Host Interaction to the Development of Vaccines. Rosa M Pintó, Cara C Burns, and Gonzalo Moratorio Frontiers in microbiology 2021 12791750 Similar articles in PubMed DOI:10.3389/fmicb.2021.791750
Update on Vaccine-Derived Poliovirus Outbreaks - Worldwide, January 2020-June 2021. Mary M Alleman, Jaume Jorba, Elizabeth Henderson, Ousmane M Diop, Shahzad Shaukat, Mohamed A Traoré, Eric Wiesen, Steven G F Wassilak, and Cara C Burns MMWR. Morbidity and mortality weekly report 2021 70(49) 1691-1699 Similar articles in PubMed DOI:10.15585/mmwr.mm7049a1
Culture-Independent Detection of Poliovirus in Stool Samples by Direct RNA Extraction. Chelsea Harrington, Hong Sun, Stacey Jeffries-Miles, Nancy Gerloff, Mark Mandelbaum, Hong Pang, Nikail Collins, Cara C Burns, and Everardo Vega Microbiology spectrum 2021 e0066821 Similar articles in PubMed DOI:10.1128/Spectrum.00668-21
Direct detection of polioviruses using a recombinant poliovirus receptor. Nancy Gerloff, Mark Mandelbaum, Hong Pang, Nikail Collins, Brittani Brown, Hong Sun, Chelsea Harrington, Jessica Hecker, Chadi Agha, Cara C Burns, and Everardo Vega PloS one 2021 16(11) e0259099 Similar articles in PubMed DOI:10.1371/journal.pone.0259099
Progress Toward Polio Eradication - Worldwide, January 2017-March 2019. Sharon A Greene, Jamal Ahmed, S Deblina Datta, Cara C Burns, Arshad Quddus, John F Vertefeuille, and Steven G F Wassilak MMWR. Morbidity and mortality weekly report 2019 68(20) 458-462 Similar articles in PubMed DOI:10.15585/mmwr.mm6820a3
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization. Jennifer L Konopka-Anstadt, Ray Campagnoli, Annelet Vincent, Jing Shaw, Ling Wei, Nhien T Wynn, Shane E Smithee, Erika Bujaki, Ming Te Yeh, Majid Laassri, Tatiana Zagorodnyaya, Amy J Weiner, Konstantin Chumakov, Raul Andino, Andrew MacAdam, Olen Kew, and Cara C Burns NPJ vaccines 2020 Mar 5(1) 26 Similar articles in PubMed DOI:10.1038/s41541-020-0176-7
Updated Characterization of Outbreak Response Strategies for 2019-2029: Impacts of Using a Novel Type 2 Oral Poliovirus Vaccine Strain. Dominika A Kalkowska, Mark A Pallansch, Amanda Wilkinson, Ananda S Bandyopadhyay, Jennifer L Konopka-Anstadt, Cara C Burns, M Steven Oberste, Steven G F Wassilak, Kamran Badizadegan, and Kimberly M Thompson Risk analysis : an official publication of the Society for Risk Analysis 2020 Nov Similar articles in PubMed DOI:10.1111/risa.13622
Poliovirus serotype-specific VP1 sequencing primers. David R Kilpatrick, Jane C Iber, Qi Chen, Karen Ching, Su-Ju Yang, Lina De, Mark D Mandelbaum, Brian Emery, Ray Campagnoli, Cara C Burns, and Olen Kew Journal of virological methods 2011 Jun 174(1-2) 128-30 Similar articles in PubMed DOI:10.1016/j.jviromet.2011.03.020
Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses. Rachel L Marine, Laura C Magaña, Christina J Castro, Kun Zhao, Anna M Montmayeur, Alexander Schmidt, Marta Diez-Valcarce, Terry Fei Fan Ng, Jan Vinjé, Cara C Burns, W Allan Nix, Paul A Rota, and M Steven Oberste Journal of virological methods 2020 Apr 113865 Similar articles in PubMed DOI:10.1016/j.jviromet.2020.113865
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization. Jennifer L Konopka-Anstadt, Ray Campagnoli, Annelet Vincent, Jing Shaw, Ling Wei, Nhien T Wynn, Shane E Smithee, Erika Bujaki, Ming Te Yeh, Majid Laassri, Tatiana Zagorodnyaya, Amy J Weiner, Konstantin Chumakov, Raul Andino, Andrew MacAdam, Olen Kew, and Cara C Burns NPJ vaccines 2020 26 Similar articles in PubMed DOI:10.1038/s41541-020-0176-7
A New Solid Matrix for Preservation of Viral Nucleic Acid from Clinical Specimens at Ambient Temperature. Theresa Cromeans, Jothikumar Narayanan, Jeongsu Lee, Nikail Collins, Cara C Burns, Vincent R Hill, and Jan Vinjé Journal of virological methods 2019 Sep 113732 Similar articles in PubMed DOI:10.1016/j.jviromet.2019.113732
Update on Vaccine-Derived Poliovirus Outbreaks - Democratic Republic of the Congo and Horn of Africa, 2017-2018. Chukwuma Mbaeyi, Mary M Alleman, Derek Ehrhardt, Eric Wiesen, Cara C Burns, Hongmei Liu, Raimi Ewetola, Lerato Seakamela, Rennatus Mdodo, Modjirom Ndoutabe, Pierre Kandolo Wenye, Yogolelo Riziki, Peter Borus, Christopher Kamugisha, and Steven G F Wassilak MMWR. Morbidity and mortality weekly report 2019 Mar (9) 225-230 Similar articles in PubMed DOI:10.15585/mmwr.mm6809a2
PoSE: visualization of patterns of sequence evolution using PAML and MATLAB. Kun Zhao, Elizabeth Henderson, Kelley Bullard, M Steven Oberste, Cara C Burns, and Jaume Jorba BMC bioinformatics 2018 Oct (Suppl 11) 364 Similar articles in PubMed DOI:10.1186/s12859-018-2335-7
Strategic Response to an Outbreak of Circulating Vaccine-Derived Poliovirus Type 2 - Syria, 2017-2018. Chukwuma Mbaeyi, Zubair Mufti Wadood, Thomas Moran, , Fazal Ather, Tasha Stehling-Ariza, Joanna Nikulin, Mohammad Al Safadi, Jane Iber, Laurel Zomahoun, Nidal Abourshaid, Hong Pang, Nikki Collins, Humayun Asghar, Obaid Ul Islam Butt, Cara C Burns, Derek Ehrhardt, and Magdi Sharaf MMWR. Morbidity and mortality weekly report 2018 Jun (24) 690-694 Similar articles in PubMed DOI:10.15585/mmwr.mm6724a5
Dynamics of Evolution of Poliovirus Neutralizing Antigenic Sites and Other Capsid Functional Domains during a Large and Prolonged Outbreak. Jing Shaw, Jaume Jorba, Kun Zhao, Jane Iber, Qi Chen, Festus Adu, Adekunle Adeniji, David Bukbuk, Marycelin Baba, Elizabeth Henderson, Naomi Dybdahl-Sissoko, Sharla Macdonald, William C Weldon, Nicksy Gumede, M Steven Oberste, Olen M Kew, and Cara C Burns Journal of virology 2018 Feb Similar articles in PubMed DOI:10.1128/JVI.01949-17
Are Circulating Type 2 Vaccine-derived Polioviruses (VDPVs) Genetically Distinguishable from Immunodeficiency-associated VDPVs? Kun Zhao, Jaume Jorba, Jing Shaw, Jane Iber, Qi Chen, Kelley Bullard, Olen M Kew, and Cara C Burns Computational and structural biotechnology journal 2017 456-462 Similar articles in PubMed DOI:10.1016/j.csbj.2017.09.004
The role of supplementary environmental surveillance to complement acute flaccid paralysis surveillance for wild poliovirus in Pakistan - 2011-2013. Tori L Cowger, Cara C Burns, Salmaan Sharif, Howard E Gary, Jane Iber, Elizabeth Henderson, Farzana Malik, Syed Sohail Zahoor Zaidi, Shahzad Shaukat, Lubna Rehman, Mark A Pallansch, and Walter A Orenstein PloS one 2017 (7) e0180608 Similar articles in PubMed DOI:10.1371/journal.pone.0180608
High-Throughput Next Generation Sequencing of Polioviruses. Anna M Montmayeur, Terry Fei Fan Ng, Alexander Schmidt, Kun Zhao, Laura Magaña, Jane Iber, Christina J Castro, Qi Chen, Elizabeth Henderson, Edward Ramos, Jing Shaw, Roman L Tatusov, Naomi Dybdahl-Sissoko, Marie Claire Endegue-Zanga, Johnson A Adeniji, M Steven Oberste, and Cara C Burns Journal of clinical microbiology 2016 Dec Similar articles in PubMed DOI:10.1128/JCM.02121-16
Surveillance Systems to Track Progress Toward Polio Eradication - Worldwide, 2014-2015. Cynthia J Snider, Ousmane M Diop, Cara C Burns, Rudolph H Tangermann, and Steven G F Wassilak MMWR. Morbidity and mortality weekly report 2016 (13) 346-51 Similar articles in PubMed DOI:10.15585/mmwr.mm6513a3
Importation and outbreak of wild polioviruses from 2000 to 2014 and interruption of transmission in Cameroon. Marie Claire Endegue-Zanga, Serge Alain Sadeuh-Mba, Jane Iber, Cara C Burns, Nicksy Gumede Moeletsi, Marycelin Baba, David Bukbuk, Francis Delpeyroux, Marcellin Nimpa Mengouo, Maurice Demanou, Guy Vernet, François-Xavier Etoa, and Richard Njouom Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2016 Mar 7918-24 Similar articles in PubMed DOI:10.1016/j.jcv.2016.03.025
Molecular and Phenotypic Characterization of a Highly Evolved Type 2 Vaccine-Derived Poliovirus Isolated from Seawater in Brazil, 2014. Klécia Marília S de Melo Cassemiro, Fernanda M Burlandy, Mikaela R F Barbosa, Qi Chen, Jaume Jorba, Elayse M Hachich, Maria I Z Sato, Cara C Burns, and Edson E da Silva PloS one 2016 (3) e0152251 Similar articles in PubMed DOI:10.1371/journal.pone.0152251
Molecular Properties of Poliovirus Isolates: Nucleotide Sequence Analysis, Typing by PCR and Real-Time RT-PCR. Cara C Burns, David R Kilpatrick, Jane C Iber, Qi Chen, and Olen M Kew Methods in molecular biology (Clifton, N.J.) 2016 177-212 Similar articles in PubMed DOI:10.1007/978-1-4939-3292-4_9
Vaccine-derived polioviruses. Cara C Burns, Ousmane M Diop, Roland W Sutter, and Olen M Kew The Journal of infectious diseases 2014 Nov S283-93 Similar articles in PubMed DOI:10.1093/infdis/jiu295
Environmental surveillance for polioviruses in the Global Polio Eradication Initiative. Humayun Asghar, Ousmane M Diop, Goitom Weldegebriel, Farzana Malik, Sushmitha Shetty, Laila El Bassioni, Adefunke O Akande, Eman Al Maamoun, Sohail Zaidi, Adekunle J Adeniji, Cara C Burns, Jagadish Deshpande, M Steve Oberste, and Sara A Lowther The Journal of infectious diseases 2014 Nov S294-303 Similar articles in PubMed DOI:10.1093/infdis/jiu384
Sabin vaccine reversion in the field: a comprehensive analysis of Sabin-like poliovirus isolates in Nigeria. Michael Famulare, Stewart Chang, Jane Iber, Kun Zhao, Johnson A Adeniji, David Bukbuk, Marycelin Baba, Matthew Behrend, Cara C Burns, and M Steven Oberste Journal of virology 2015 Oct Similar articles in PubMed DOI:10.1128/JVI.01532-15
Field study of fecal excretion as a decision support tool in response to silent reintroduction of wild-type poliovirus 1 into Israel. Jacob Moran-Gilad, Ella Mendelson, Cara C Burns, Ravit Bassal, Michael Gdalevich, Danit Sofer, M Steven Oberste, Lester M Shulman, Ehud Kaliner, Musa Hindiyeh, Musa Hindiye, Orna Mor, Liora Shahar, Jane Iber, Ruth Yishay, Joseph Manor, Boaz Lev, Ronni Gamzu, and Itamar Grotto J. Clin. Virol. 2015 May 6651-5 Similar articles in PubMed DOI:10.1016/j.jcv.2015.03.005
Genetic analysis and characterization of wild poliovirus type 1 during sustained transmission in a population with >95% vaccine coverage, Israel 2013. Lester M Shulman, Javier Martin, Danit Sofer, Cara C Burns, Yossi Manor, Musa Hindiyeh, Eugene Gavrilin, Thomas Wilton, Jacob Moran-Gilad, Ronni Gamzo, Ella Mendelson, Itamar Grotto, , Clin. Infect. Dis. 2015 Apr 1. 60(7) 1057-64 Similar articles in PubMed DOI:10.1093/cid/ciu1136