CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Jan 26, 2023. (Total: 4179 publications since 2011)

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Records 1-30 (of 42 Records)

Query Trace: all>>Jonas M Winchell[CDC Author]
Effect of Time Since Death on Multipathogen Molecular Test Results of Postmortem Specimens Collected Using Minimally Invasive Tissue Sampling Techniques. Jeanette Dawa, Edwin Walong, Clayton Onyango, John Mathaiya, Peter Muturi, Milka Bunei, Washington Ochieng, Walter Barake, Josilene N Seixas, Lillian Mayieka, Melvin Ochieng, Victor Omballa, Shirley Lidechi, Elizabeth Hunsperger, Nancy A Otieno, Jana M Ritter, Marc-Alain Widdowson, Maureen H Diaz, Jonas M Winchell, Roosecelis B Martines, Sherif R Zaki, and Sandra S Chaves Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021 73(Supplement_5) S360-S367 Similar articles in PubMed DOI:10.1093/cid/ciab810
Use of Real-Time PCR for Chlamydia psittaci Detection in Human Specimens During an Outbreak of Psittacosis - Georgia and Virginia, 2018. Olivia L McGovern, Miwako Kobayashi, Kelly A Shaw, Christine Szablewski, Julie Gabel, Caroline Holsinger, Cherie Drenzek, Skyler Brennan, Jennifer Milucky, Jennifer L Farrar, Bernard J Wolff, Alvaro J Benitez, Kathleen A Thurman, Maureen H Diaz, Jonas M Winchell, and Stephanie Schrag MMWR. Morbidity and mortality weekly report 2021 70(14) 505-509 Similar articles in PubMed DOI:10.15585/mmwr.mm7014a1
Evaluation of Commercial Molecular Diagnostic Methods for the Detection and Determination of Macrolide Resistance in Mycoplasma pneumoniae . Sixto M Leal, Arthur H Totten, Li Xiao, Donna M Crabb, Amy Ratliff, Lynn B Duffy, Karen B Fowler, Emily Mixon, Jonas M Winchell, Maureen H Diaz, Alvaro J Benitez, Bernard J Wolff, Xuan Qin, Y-W Tang, Mark Gonzalez, Raj Selvarangan, Tao Hong, Edward Brooks, Steve Dallas, T Prescott Atkinson, Xiaotian Zheng, Jennifer Dien Bard, and Ken B Waites Journal of clinical microbiology 2020 Apr Similar articles in PubMed DOI:10.1128/JCM.00242-20
Development and Implementation of Multiplex TaqMan Array Cards for Specimen Testing at Child Health and Mortality Prevention Surveillance Site Laboratories. Maureen H Diaz, Jessica L Waller, M Jordan Theodore, Nishi Patel, Bernard J Wolff, Alvaro J Benitez, Timothy Morris, Pratima L Raghunathan, Robert F Breiman, Cynthia G Whitney, Dianna M Blau, and Jonas M Winchell Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2019 Oct 69(Supplement_4) S311-S321 Similar articles in PubMed DOI:10.1093/cid/ciz571
Surveillance for incidence and etiology of early-onset neonatal sepsis in Soweto, South Africa. Sithembiso C Velaphi, Matthew Westercamp, Malefu Moleleki, Tracy Pondo, Ziyaad Dangor, Nicole Wolter, Anne von Gottberg, Nong Shang, Alicia Demirjian, Jonas M Winchell, Maureen H Diaz, Firdose Nakwa, Grace Okudo, Jeannette Wadula, Clare Cutland, Stephanie J Schrag, and Shabir A Madhi PloS one 2019 14(4) e0214077 Similar articles in PubMed DOI:10.1371/journal.pone.0214077
Culture of Clinical Specimens Reveals Extensive Diversity of Legionella pneumophila Strains in Arizona. Brian H Raphael, Trung Huynh, Ellen Brown, Jessica C Smith, Irene Ruberto, Linda Getsinger, Stacy White, and Jonas M Winchell mSphere 2019 Feb 4(1) Similar articles in PubMed DOI:10.1128/mSphere.00649-18
Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1. Jeffrey W Mercante, Jason A Caravas, Maliha K Ishaq, Natalia A Kozak-Muiznieks, Brian H Raphael, and Jonas M Winchell PloS one 2018 13(10) e0206110 Similar articles in PubMed DOI:10.1371/journal.pone.0206110
Epidemiology and Molecular Identification and Characterization of Mycoplasma pneumoniae, South Africa, 2012-2015. Maimuna Carrim, Nicole Wolter, Alvaro J Benitez, Stefano Tempia, Mignon du Plessis, Sibongile Walaza, Fahima Moosa, Maureen H Diaz, Bernard J Wolff, Florette K Treurnicht, Orienka Hellferscee, Halima Dawood, Ebrahim Variava, Cheryl Cohen, Jonas M Winchell, and Anne von Gottberg Emerging infectious diseases 2018 Mar 24(3) 506-513 Similar articles in PubMed DOI:10.3201/eid2403.162052
Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies. Natalia A Kozak-Muiznieks, Shatavia S Morrison, Jeffrey W Mercante, Maliha K Ishaq, Taccara Johnson, Jason Caravas, Claressa E Lucas, Ellen Brown, Brian H Raphael, and Jonas M Winchell Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2018 Feb Similar articles in PubMed DOI:10.1016/j.meegid.2018.02.008
Development of a multiplex TaqMan real-time PCR assay for the detection of Chlamydia psittaci and Chlamydia pneumoniae in human clinical specimens. Bernard J Wolff, Shatavia S Morrison, and Jonas M Winchell Diagnostic microbiology and infectious disease 2017 Nov Similar articles in PubMed DOI:10.1016/j.diagmicrobio.2017.11.014
Mycoplasma hominis Infections Transmitted Through Amniotic Tissue Product. Shannon A Novosad, Sridhar V Basavaraju, Pallavi Annambhotla, Marika Mohr, Alison Laufer Halpin, Linda Foy, Richard Chmielewski, Jonas M Winchell, Alvaro J Benitez, Shatavia S Morrison, Taccara Johnson, Donna M Crabb, Amy E Ratliff, Ken Waites, and Matthew J Kuehnert Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2017 Oct 65(7) 1152-1158 Similar articles in PubMed DOI:10.1093/cid/cix507
Molecular characterization of Mycoplasma pneumoniae infections in two rural populations of Thailand from 2009-2012. Toni Whistler, Pongpun Sawatwong, Maureen H Diaz, Alvaro J Benitez, Bernard J Wolff, Patranuch Sapchookul, Somsak Thamthitiwat, and Jonas M Winchell Journal of clinical microbiology 2017 May Similar articles in PubMed DOI:10.1128/JCM.00350-17
Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants. Maureen H Diaz, Heta P Desai, Shatavia S Morrison, Alvaro J Benitez, Bernard J Wolff, Jason Caravas, Timothy D Read, Deborah Dean, and Jonas M Winchell PloS one 2017 12(4) e0174701 Similar articles in PubMed DOI:10.1371/journal.pone.0174701
Multi-center evaluation of one commercial and 12 in-house real-time PCR assays for detection of Mycoplasma pneumoniae. Roger Dumke, Alvaro J Benitez, Victoria Chalker, Karolina Gullsby, Birgit Henrich, Carlos Hidalgo-Grass, Theo Hoogenboezem, Darja Kese, Katherine Loens, Jolanda Maaskant, Ayelet Michael-Gayego, Allon E Moses, Ran Nir-Paz, Suzan D Pas, Sabine Pereyre, Randi F Petersen, Meike Rosenblatt, Annemarie M C van Rossum, Søren A Uldum, Wendy W J Unger, Dominique Ursi, Jonas M Winchell, Cecile Bebear, and Diagnostic microbiology and infectious disease 2017 Jun 88(2) 111-114 Similar articles in PubMed DOI:10.1016/j.diagmicrobio.2017.03.004
Complete Genome Sequence of Mycoplasma pneumoniae Type 2 Reference Strain FH Using Single-Molecule Real-Time Sequencing Technology. Heta P Desai, Shatavia S Morrison, Maureen H Diaz, Alvaro J Benitez, Bernard J Wolff, and Jonas M Winchell Genome announcements 2017 Feb (8) Similar articles in PubMed DOI:10.1128/genomeA.01629-16
Complete Genome Sequences of Legionella pneumophila subsp. fraseri Strains Detroit-1 and Dallas 1E. Brian H Raphael, Natalia A Kozak-Muiznieks, Shatavia S Morrison, Jeffrey W Mercante, and Jonas M Winchell Genome announcements 2017 Feb (5) Similar articles in PubMed DOI:10.1128/genomeA.01525-16
Epidemiology and Molecular Characteristics of Mycoplasma pneumoniae During an Outbreak of M. pneumoniae-Associated Stevens-Johnson Syndrome. Louise K Francois Watkins, Daniel Olson, Maureen H Diaz, Xia Lin, Alicia Demirjian, Alvaro J Benitez, Jonas M Winchell, Christine C Robinson, Kirk A Bol, Mary P Glodé, Samuel R Dominguez, Lisa A Miller, and Preeta K Kutty The Pediatric infectious disease journal 2017 Jan Similar articles in PubMed DOI:10.1097/INF.0000000000001476
Development of a multiplex taqMan real-time PCR assay for typing of Mycoplasma pneumoniae based on type-specific indels identified through whole genome sequencing. Bernard J Wolff, Alvaro J Benitez, Heta P Desai, Shatavia S Morrison, Maureen H Diaz, and Jonas M Winchell Diagnostic microbiology and infectious disease 2016 Nov Similar articles in PubMed DOI:10.1016/j.diagmicrobio.2016.11.013
Genomic Analysis Reveals Novel Diversity among the 1976 Philadelphia Legionnaires' Disease Outbreak Isolates and Additional ST36 Strains. Jeffrey W Mercante, Shatavia S Morrison, Heta P Desai, Brian H Raphael, and Jonas M Winchell PloS one 11(9) e0164074 Similar articles in PubMed DOI:10.1371/journal.pone.0164074
Complete Genome Sequences of the Historical Legionella pneumophila Strains OLDA and Pontiac. Jeffrey W Mercante, Shatavia S Morrison, Brian H Raphael, and Jonas M Winchell Genome announcements 2016 (4) Similar articles in PubMed DOI:10.1128/genomeA.00866-16
Complete Genome Sequences of Three Outbreak-Associated Legionella pneumophila Isolates. Shatavia S Morrison, Heta P Desai, Jeffrey W Mercante, Pascal Lapierre, Brian H Raphael, Kimberlee Musser, and Jonas M Winchell Genome announcements 2016 (4) Similar articles in PubMed DOI:10.1128/genomeA.00696-16
Identification of Bacterial and Viral Codetections With Mycoplasma pneumoniae Using the TaqMan Array Card in Patients Hospitalized With Community-Acquired Pneumonia. Maureen H Diaz, Kristen E Cross, Alvaro J Benitez, Lauri A Hicks, Preeta Kutty, Anna M Bramley, James D Chappell, Weston Hymas, Anami Patel, Chao Qi, Derek J Williams, Sandra R Arnold, Krow Ampofo, Wesley H Self, Carlos G Grijalva, Evan J Anderson, Jonathan A McCullers, Andrew T Pavia, Richard G Wunderink, Kathryn M Edwards, Seema Jain, and Jonas M Winchell Open forum infectious diseases 2016 Mar (2) ofw071 Similar articles in PubMed DOI:10.1093/ofid/ofw071
Three Genome Sequences of Legionella pneumophila subsp. pascullei Associated with Colonization of a Health Care Facility. Natalia A Kozak-Muiznieks, Shatavia S Morrison, Scott Sammons, Lori A Rowe, Mili Sheth, Michael Frace, Claressa E Lucas, Vladimir N Loparev, Brian H Raphael, and Jonas M Winchell Genome announcements 2016 (3) Similar articles in PubMed DOI:10.1128/genomeA.00335-16
Genomic resolution of outbreak-associated Legionella pneumophila serogroup 1 isolates from New York State. Brian H Raphael, Deborah J Baker, Elizabeth Nazarian, Pascal Lapierre, Dianna Bopp, Natalia A Kozak-Muiznieks, Shatavia S Morrison, Claressa E Lucas, Jeffrey W Mercante, Kimberlee A Musser, and Jonas M Winchell Applied and environmental microbiology 2016 Apr Similar articles in PubMed DOI:10.1128/AEM.00362-16
The Evolution of Advanced Molecular Diagnostics for the Detection and Characterization of Mycoplasma pneumoniae. Maureen H Diaz, and Jonas M Winchell Frontiers in microbiology 2016 232 Similar articles in PubMed DOI:10.3389/fmicb.2016.00232
Multistate Outbreak of Respiratory Infections among Unaccompanied Children, June-July 2014. Sara Tomczyk, Carmen S Arriola, Bernard Beall, Alvaro Benitez, Stephen R Benoit, LaShondra Berman, Joseph Bresee, Maria da Gloria Carvalho, Amanda Cohn, Kristen Cross, Maureen H Diaz, Louise K Francois Watkins, Ryan Gierke, Jose E Hagan, Aaron M Harris, Seema Jain, Lindsay Kim, Miwako Kobayashi, Stephen Lindstrom, Lesley McGee, Meredith McMorrow, Benjamin L Metcalf, Matthew R Moore, Iaci Moura, W Allan Nix, Edith Nyangoma, M Steven Oberste, Sonja J Olsen, Fabiana Pimenta, Christina Socias, Kathleen Thurman, Jessica Waller, Stephen H Waterman, Matthew Westercamp, Melinda Wharton, Cynthia G Whitney, Jonas M Winchell, Bernard Wolff, and Curi Kim Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Mar Similar articles in PubMed DOI:10.1093/cid/ciw147
Rapid detection and typing of pathogenic nonpneumophila Legionella spp. isolates using a multiplex real-time PCR assay. Alvaro J Benitez, and Jonas M Winchell Diagnostic microbiology and infectious disease 2016 Apr (4) 298-303 Similar articles in PubMed DOI:10.1016/j.diagmicrobio.2016.01.007
Comparative Analytical Evaluation of the Respiratory TaqMan Array Card with Real-Time PCR and Commercial Multi-Pathogen Assays. John J Harvey, Stephanie Chester, Stephen A Burke, Marisela Ansbro, Tricia Aden, Remedios Gose, Rebecca Sciulli, Jing Bai, Lucy DesJardin, Jeffrey L Benfer, Joshua Hall, Sandra Smole, Kimberly Doan, Michael D Popowich, Kirsten St George, Tammy Quinlan, Tanya A Halse, Zhen Li, Ailyn C Pérez-Osorio, William A Glover, Denny Russell, Erik Reisdorf, Thomas Whyte, Brett Whitaker, Cynthia Hatcher, Velusamy Srinivasan, Kathleen Tatti, Maria Lucia Tondella, Xin Wang, Jonas M Winchell, Leonard W Mayer, Daniel Jernigan, and Alison C Mawle Journal of virological methods 2015 Nov Similar articles in PubMed DOI:10.1016/j.jviromet.2015.11.020
Molecular Detection and Characterization of Mycoplasma pneumoniae Among Patients Hospitalized With Community-Acquired Pneumonia in the United States. Maureen H Diaz, Alvaro J Benitez, Kristen E Cross, Lauri A Hicks, Preeta Kutty, Anna M Bramley, James D Chappell, Weston Hymas, Anami Patel, Chao Qi, Derek J Williams, Sandra R Arnold, Krow Ampofo, Wesley H Self, Carlos G Grijalva, Evan J Anderson, Jonathan A McCullers, Andrew T Pavia, Richard G Wunderink, Kathryn M Edwards, Seema Jain, and Jonas M Winchell Open forum infectious diseases 2015 Sep 2(3) ofv106 Similar articles in PubMed DOI:10.1093/ofid/ofv106
Specificity and Strain-Typing Capabilities of Nanorod Array-Surface Enhanced Raman Spectroscopy for Mycoplasma pneumoniae Detection. Kelley C Henderson, Alvaro J Benitez, Amy E Ratliff, Donna M Crabb, Edward S Sheppard, Jonas M Winchell, Richard A Dluhy, Ken B Waites, T Prescott Atkinson, and Duncan C Krause PLoS ONE 2015 10(6) e0131831 Similar articles in PubMed DOI:10.1371/journal.pone.0131831