CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Jul 27, 2021. (Total: 3388 publications since 2011)

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Records 1-25 (of 25 Records)

Query Trace: all>>David S Campo[CDC Author]
Convex hulls in hamming space enable efficient search for similarity and clustering of genomic sequences. David S Campo, and Yury Khudyakov BMC bioinformatics 2020 Dec 21(Suppl 18) 482 Similar articles in PubMed DOI:10.1186/s12859-020-03811-z
Accurate spatiotemporal mapping of drug overdose deaths by machine learning of drug-related web-searches. David S Campo, Joseph W Gussler, Amanda Sue, Pavel Skums, and Yury Khudyakov PloS one 2020 15(12) e0243622 Similar articles in PubMed DOI:10.1371/journal.pone.0243622
Machine learning can accelerate discovery and application of cyber-molecular cancer diagnostics. David S Campo, and Yury Khudyakov Journal of medical artificial intelligence 2020 Mar 3(7) Similar articles in PubMed DOI:10.21037/jmai.2020.01.01
Entropy of mitochondrial DNA circulating in blood is associated with hepatocellular carcinoma. David S Campo, Vishal Nayak, Ganesh Srinivasamoorthy, and Yury Khudyakov BMC medical genomics 2019 Jun 12(Suppl 4) 74 Similar articles in PubMed DOI:10.1186/s12920-019-0506-7
Automated quality control for a molecular surveillance system. Seth Sims, Atkinson G Longmire, David S Campo, Sumathi Ramachandran, Magdalena Medrzycki, Lilia Ganova-Raeva, Yulin Lin, Amanda Sue, Hong Thai, Alexander Zelikovsky, and Yury Khudyakov BMC bioinformatics 2018 Oct (Suppl 11) 358 Similar articles in PubMed DOI:10.1186/s12859-018-2329-5
Fast estimation of genetic relatedness between members of heterogeneous populations of closely related genomic variants. Viachaslau Tsyvina, David S Campo, Seth Sims, Alex Zelikovsky, Yury Khudyakov, and Pavel Skums BMC bioinformatics 2018 Oct (Suppl 11) 360 Similar articles in PubMed DOI:10.1186/s12859-018-2333-9
GHOST: global hepatitis outbreak and surveillance technology. Atkinson G Longmire, Seth Sims, Inna Rytsareva, David S Campo, Pavel Skums, Zoya Dimitrova, Sumathi Ramachandran, Magdalena Medrzycki, Hong Thai, Lilia Ganova-Raeva, Yulin Lin, Lili T Punkova, Amanda Sue, Massimo Mirabito, Silver Wang, Robin Tracy, Victor Bolet, Thom Sukalac, Chris Lynberg, and Yury Khudyakov BMC genomics 2017 Dec (Suppl 10) 916 Similar articles in PubMed DOI:10.1186/s12864-017-4268-3
Transmissibility of intra-host hepatitis C virus variants. David S Campo, June Zhang, Sumathi Ramachandran, and Yury Khudyakov BMC genomics 2017 Dec (Suppl 10) 881 Similar articles in PubMed DOI:10.1186/s12864-017-4267-4
Efficient detection of viral transmissions with Next-Generation Sequencing data. Inna Rytsareva, David S Campo, Yueli Zheng, Seth Sims, Sharma V Thankachan, Cansu Tetik, Jain Chirag, Sriram P Chockalingam, Amanda Sue, Srinivas Aluru, and Yury Khudyakov BMC genomics 2017 May (Suppl 4) 372 Similar articles in PubMed DOI:10.1186/s12864-017-3732-4
Molecular epidemiology of hepatitis B virus infection in Tanzania. Joseph C Forbi, Michael Dillon, Michael A Purdy, Bakary S Drammeh, Alexandra Tejada-Strop, Daniel McGovern, Guo-Liang Xia, Yulin Lin, Lilia M Ganova-Raeva, David S Campo, Hong Thai, Gilberto Vaughan, Dunstan Haule, Regina P Kutaga, Sridhar V Basavaraju, Saleem Kamili, and Yury E Khudyakov The Journal of general virology 2017 May Similar articles in PubMed DOI:10.1099/jgv.0.000776
Increased Mitochondrial Genetic Diversity in Persons Infected With Hepatitis C Virus. David S Campo, Ha-Jung Roh, Brian L Pearlman, Daniel S Fierer, Sumathi Ramachandran, Gilberto Vaughan, Andrew Hinds, Zoya Dimitrova, Pavel Skums, and Yury Khudyakov Cellular and molecular gastroenterology and hepatology 2016 Sep (5) 676-684 Similar articles in PubMed DOI:10.1016/j.jcmgh.2016.05.012
Next-Generation Sequencing Reveals Frequent Opportunities for Exposure to Hepatitis C Virus in Ghana. Joseph C Forbi, Jennifer E Layden, Richard O Phillips, Nallely Mora, Guo-Liang Xia, David S Campo, Michael A Purdy, Zoya E Dimitrova, Dorcas O Owusu, Lili T Punkova, Pavel Skums, Shirley Owusu-Ofori, Fred Stephen Sarfo, Gilberto Vaughan, Hajung Roh, Ohene K Opare-Sem, Richard S Cooper, and Yury E Khudyakov PloS one 2015 (12) e0145530 Similar articles in PubMed DOI:10.1371/journal.pone.0145530
Accurate genetic detection of hepatitis C virus transmissions in outbreak settings. David S Campo, Guo-Liang Xia, Zoya Dimitrova, Yulin Lin, Joseph C Forbi, Lilia Ganova-Raeva, Lili Punkova, Sumathi Ramachandran, Hong Thai, Pavel Skums, Seth Sims, Inna Rytsareva, Gilberto Vaughan, Ha-Jung Roh, Michael A Purdy, Amanda Sue, and Yury Khudyakov The Journal of infectious diseases 2015 Nov Similar articles in PubMed DOI:10.1093/infdis/jiv542
Cryptic Hepatitis B and E in Patients With Acute Hepatitis of Unknown Etiology. Lilia Ganova-Raeva, Lili Punkova, David S Campo, Zoya Dimitrova, Pavel Skums, Nga H Vu, Do T Dat, Harry R Dalton, and Yury Khudyakov J. Infect. Dis. 2015 Jun 8. Similar articles in PubMed DOI:10.1093/infdis/jiv315
Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling. Pavel Skums, Alexander Artyomenko, Olga Glebova, Sumathi Ramachandran, Ion Mandoiu, David S Campo, Zoya Dimitrova, Alex Zelikovsky, and Yury Khudyakov Bioinformatics 2015 Mar 1. (5) 682-90 Similar articles in PubMed DOI:10.1093/bioinformatics/btu726
Recent population expansions of hepatitis B virus in the United States. Sumathi Ramachandran, Michael A Purdy, Guo-Liang Xia, David S Campo, Zoya E Dimitrova, Eyasu H Teshale, Chong Gee Teo, and Yury E Khudyakov J. Virol. 2014 Dec 88(24) 13971-80 Similar articles in PubMed DOI:10.1128/JVI.01594-14
Next-generation sequencing reveals large connected networks of intra-host HCV variants. David S Campo, Zoya Dimitrova, Lilian Yamasaki, Pavel Skums, Daryl Ty Lau, Gilberto Vaughan, Joseph C Forbi, Chong-Gee Teo, and Yury Khudyakov BMC Genomics 2014 15 Suppl 5S4 Similar articles in PubMed DOI:10.1186/1471-2164-15-S5-S4
Intra-host diversity and evolution of hepatitis C virus endemic to Côte d'Ivoire. Joseph C Forbi, David S Campo, Michael A Purdy, Zoya E Dimitrova, Pavel Skums, Guo-Liang Xia, Lili T Punkova, Lilia M Ganova-Raeva, Gilberto Vaughan, Yousr Ben-Ayed, William M Switzer, and Yury E Khudyakov J. Med. Virol. 2014 May 86(5) 765-71 Similar articles in PubMed DOI:10.1002/jmv.23897
Application of mass spectrometry to molecular surveillance of hepatitis B and C viral infections. Lilia M Ganova-Raeva, Zoya E Dimitrova, David S Campo, and Yury Khudyakov Antivir. Ther. (Lond.) 2012 17(7 Pt B) 1477-82 Similar articles in PubMed DOI:10.3851/IMP2466
Detection of hepatitis C virus transmission by use of DNA mass spectrometry. Lilia M Ganova-Raeva, Zoya E Dimitrova, David S Campo, Yulin Lin, Sumathi Ramachandran, Guo-Liang Xia, Christiane Honisch, Charles R Cantor, and Yury E Khudyakov J. Infect. Dis. 2013 Mar 15. 207(6) 999-1006 Similar articles in PubMed DOI:10.1093/infdis/jis938
Efficient error correction for next-generation sequencing of viral amplicons. Pavel Skums, Zoya Dimitrova, David S Campo, Gilberto Vaughan, Livia Rossi, Joseph C Forbi, Jonny Yokosawa, Alex Zelikovsky, and Yury Khudyakov BMC bioinformatics 2012 Jun 13 Suppl 10S6 Similar articles in PubMed DOI:10.1186/1471-2105-13-S10-S6
Convergence and coevolution of hepatitis B virus drug resistance. Hong Thai, David S Campo, James Lara, Zoya Dimitrova, Sumathi Ramachandran, Guoliang Xia, Lilia Ganova-Raeva, Chong-Gee Teo, Anna Lok, and Yury Khudyakov Nat Commun 2012 3789 Similar articles in PubMed DOI:10.1038/ncomms1794
Epidemic history of hepatitis C virus infection in two remote communities in Nigeria, West Africa. Joseph C Forbi, Michael A Purdy, David S Campo, Gilberto Vaughan, Zoya E Dimitrova, Lilia M Ganova-Raeva, Guo-Liang Xia, and Yury E Khudyakov J. Gen. Virol. 2012 Jul 93(Pt 7) 1410-21 Similar articles in PubMed DOI:10.1099/vir.0.042184-0
Hepatitis C virus antigenic convergence. David S Campo, Zoya Dimitrova, Jonny Yokosawa, Duc Hoang, Nestor O Perez, Sumathi Ramachandran, and Yury Khudyakov Scientific reports 2012 2267 Similar articles in PubMed DOI:10.1038/srep00267
Temporal variations in the hepatitis C virus intrahost population during chronic infection. Sumathi Ramachandran, David S Campo, Zoya E Dimitrova, Guo-Liang Xia, Michael A Purdy, and Yury E Khudyakov J. Virol. 2011 Jul 85(13) 6369-80 Similar articles in PubMed DOI:10.1128/JVI.02204-10