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Public Health Genomics and Precision Health Knowledge Base (v6.9)
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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB
CDC-Authored Genomics and Precision Health Publications Database
Last data update: Jan 19, 2021
. (Total: 3116 publications since 2011)
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Records 1-26 (of 26 Records)
Query Trace:
all>>David S Campo[CDC Author]
Convex hulls in hamming space enable efficient search for similarity and clustering of genomic sequences.
David S Campo
, and
Yury Khudyakov
BMC bioinformatics 2020 Dec 21(Suppl 18) 482
Similar articles in PubMed
Accurate spatiotemporal mapping of drug overdose deaths by machine learning of drug-related web-searches.
David S Campo
, Joseph W Gussler,
Amanda Sue
, Pavel Skums, and
Yury Khudyakov
PloS one 2020 15(12) e0243622
Similar articles in PubMed
Machine learning can accelerate discovery and application of cyber-molecular cancer diagnostics.
David S Campo
, and
Yury Khudyakov
Journal of medical artificial intelligence 2020 Mar 3(7)
Similar articles in PubMed
Entropy of mitochondrial DNA circulating in blood is associated with hepatocellular carcinoma.
David S Campo
, Vishal Nayak, Ganesh Srinivasamoorthy, and
Yury Khudyakov
BMC medical genomics 2019 Jun 12(Suppl 4) 74
Similar articles in PubMed
Automated quality control for a molecular surveillance system.
Seth Sims, Atkinson G Longmire,
David S Campo
,
Sumathi Ramachandran
,
Magdalena Medrzycki
,
Lilia Ganova-Raeva
,
Yulin Lin
,
Amanda Sue
,
Hong Thai
, Alexander Zelikovsky, and
Yury Khudyakov
BMC bioinformatics 2018 Oct (Suppl 11) 358
Similar articles in PubMed
Fast estimation of genetic relatedness between members of heterogeneous populations of closely related genomic variants.
Viachaslau Tsyvina,
David S Campo
,
Seth Sims
, Alex Zelikovsky,
Yury Khudyakov
, and
Pavel Skums
BMC bioinformatics 2018 Oct (Suppl 11) 360
Similar articles in PubMed
GHOST: global hepatitis outbreak and surveillance technology.
Atkinson G Longmire
,
Seth Sims
,
Inna Rytsareva
,
David S Campo
,
Pavel Skums
,
Zoya Dimitrova
,
Sumathi Ramachandran
,
Magdalena Medrzycki
,
Hong Thai
,
Lilia Ganova-Raeva
,
Yulin Lin
,
Lili T Punkova
,
Amanda Sue
,
Massimo Mirabito
,
Silver Wang
,
Robin Tracy
,
Victor Bolet
,
Thom Sukalac
,
Chris Lynberg
, and
Yury Khudyakov
BMC genomics 2017 Dec (Suppl 10) 916
Similar articles in PubMed
Transmissibility of intra-host hepatitis C virus variants.
David S Campo
, June Zhang,
Sumathi Ramachandran
, and
Yury Khudyakov
BMC genomics 2017 Dec (Suppl 10) 881
Similar articles in PubMed
Efficient detection of viral transmissions with Next-Generation Sequencing data.
Inna Rytsareva
,
David S Campo
,
Yueli Zheng
,
Seth Sims
, Sharma V Thankachan, Cansu Tetik, Jain Chirag, Sriram P Chockalingam,
Amanda Sue
, Srinivas Aluru, and
Yury Khudyakov
BMC genomics 2017 May (Suppl 4) 372
Similar articles in PubMed
Molecular epidemiology of hepatitis B virus infection in Tanzania.
Joseph C Forbi
, Michael Dillon,
Michael A Purdy
,
Bakary S Drammeh
,
Alexandra Tejada-Strop
,
Daniel McGovern
,
Guo-Liang Xia
,
Yulin Lin
,
Lilia M Ganova-Raeva
,
David S Campo
,
Hong Thai
,
Gilberto Vaughan
, Dunstan Haule, Regina P Kutaga, Sridhar V Basavaraju,
Saleem Kamili
, and
Yury E Khudyakov
The Journal of general virology 2017 May
Similar articles in PubMed
Increased Mitochondrial Genetic Diversity in Persons Infected With Hepatitis C Virus.
David S Campo
,
Ha-Jung Roh
, Brian L Pearlman, Daniel S Fierer,
Sumathi Ramachandran
,
Gilberto Vaughan
, Andrew Hinds,
Zoya Dimitrova
,
Pavel Skums
, and
Yury Khudyakov
Cellular and molecular gastroenterology and hepatology 2016 Sep (5) 676-684
Similar articles in PubMed
Next-Generation Sequencing Reveals Frequent Opportunities for Exposure to Hepatitis C Virus in Ghana.
Joseph C Forbi
, Jennifer E Layden, Richard O Phillips, Nallely Mora,
Guo-Liang Xia
,
David S Campo
,
Michael A Purdy
,
Zoya E Dimitrova
, Dorcas O Owusu,
Lili T Punkova
,
Pavel Skums
, Shirley Owusu-Ofori, Fred Stephen Sarfo,
Gilberto Vaughan
,
Hajung Roh
, Ohene K Opare-Sem, Richard S Cooper, and
Yury E Khudyakov
PloS one 2015 (12) e0145530
Similar articles in PubMed
Accurate genetic detection of hepatitis C virus transmissions in outbreak settings.
David S Campo
,
Guo-Liang Xia
,
Zoya Dimitrova
,
Yulin Lin
,
Joseph C Forbi
,
Lilia Ganova-Raeva
,
Lili Punkova
,
Sumathi Ramachandran
,
Hong Thai
,
Pavel Skums
,
Seth Sims
,
Inna Rytsareva
,
Gilberto Vaughan
,
Ha-Jung Roh
,
Michael A Purdy
,
Amanda Sue
, and
Yury Khudyakov
The Journal of infectious diseases 2015 Nov
Similar articles in PubMed
Cryptic Hepatitis B and E in Patients With Acute Hepatitis of Unknown Etiology.
Lilia Ganova-Raeva
,
Lili Punkova
,
David S Campo
,
Zoya Dimitrova
,
Pavel Skums
, Nga H Vu, Do T Dat, Harry R Dalton, and
Yury Khudyakov
J. Infect. Dis. 2015 Jun 8.
Similar articles in PubMed
Good laboratory practice for clinical next-generation sequencing informatics pipelines.
Amy S Gargis
,
Lisa Kalman
, David P Bick, Cristina da Silva, David P Dimmock, Birgit H Funke, Sivakumar Gowrisankar, Madhuri R Hegde, Shashikant Kulkarni, Christopher E Mason, Rakesh Nagarajan, Karl V Voelkerding, Elizabeth A Worthey, Nazneen Aziz,
John Barnes
, Sarah F Bennett, Himani Bisht, Deanna M Church,
Zoya Dimitrova
,
Shaw R Gargis
, Nabil Hafez, Tina Hambuch, Fiona C L Hyland, Ruth Ann Luna,
Duncan MacCannell
, Tobias Mann, Megan R McCluskey, Timothy K McDaniel,
Lilia M Ganova-Raeva
, Heidi L Rehm, Jeffrey Reid, David S Campo, Richard B Resnick, Perry G Ridge, Marc L Salit,
Pavel Skums
, Lee-Jun C Wong,
Barbara A Zehnbauer
, Justin M Zook, and
Ira M Lubin
Nature biotechnology 2015 Jul (7) 689-93
Similar articles in PubMed
Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling.
Pavel Skums
,
Alexander Artyomenko
,
Olga Glebova
,
Sumathi Ramachandran
,
Ion Mandoiu
,
David S Campo
,
Zoya Dimitrova
,
Alex Zelikovsky
, and
Yury Khudyakov
Bioinformatics 2015 Mar 1. (5) 682-90
Similar articles in PubMed
Recent population expansions of hepatitis B virus in the United States.
Sumathi Ramachandran
,
Michael A Purdy
,
Guo-Liang Xia
,
David S Campo
,
Zoya E Dimitrova
,
Eyasu H Teshale
,
Chong Gee Teo
, and
Yury E Khudyakov
J. Virol. 2014 Dec 88(24) 13971-80
Similar articles in PubMed
Next-generation sequencing reveals large connected networks of intra-host HCV variants.
David S Campo
,
Zoya Dimitrova
, Lilian Yamasaki,
Pavel Skums
, Daryl Ty Lau, Gilberto Vaughan,
Joseph C Forbi
, Chong-Gee Teo, and
Yury Khudyakov
BMC Genomics 2014 15 Suppl 5S4
Similar articles in PubMed
Intra-host diversity and evolution of hepatitis C virus endemic to Côte d'Ivoire.
Joseph C Forbi
,
David S Campo
,
Michael A Purdy
,
Zoya E Dimitrova
,
Pavel Skums
,
Guo-Liang Xia
,
Lili T Punkova
,
Lilia M Ganova-Raeva
,
Gilberto Vaughan
,
Yousr Ben-Ayed
,
William M Switzer
, and
Yury E Khudyakov
J. Med. Virol. 2014 May 86(5) 765-71
Similar articles in PubMed
Application of mass spectrometry to molecular surveillance of hepatitis B and C viral infections.
Lilia M Ganova-Raeva
,
Zoya E Dimitrova
,
David S Campo
, and
Yury Khudyakov
Antivir. Ther. (Lond.) 2012 17(7 Pt B) 1477-82
Similar articles in PubMed
Detection of hepatitis C virus transmission by use of DNA mass spectrometry.
Lilia M Ganova-Raeva
,
Zoya E Dimitrova
,
David S Campo
,
Yulin Lin
,
Sumathi Ramachandran
,
Guo-Liang Xia
, Christiane Honisch, Charles R Cantor, and
Yury E Khudyakov
J. Infect. Dis. 2013 Mar 15. 207(6) 999-1006
Similar articles in PubMed
Efficient error correction for next-generation sequencing of viral amplicons.
Pavel Skums
,
Zoya Dimitrova
,
David S Campo
,
Gilberto Vaughan
,
Livia Rossi
,
Joseph C Forbi
, Jonny Yokosawa, Alex Zelikovsky, and
Yury Khudyakov
BMC bioinformatics 2012 Jun 13 Suppl 10S6
Similar articles in PubMed
Convergence and coevolution of hepatitis B virus drug resistance.
Hong Thai
,
David S Campo
,
James Lara
,
Zoya Dimitrova
,
Sumathi Ramachandran
,
Guoliang Xia
,
Lilia Ganova-Raeva
,
Chong-Gee Teo
, Anna Lok, and
Yury Khudyakov
Nat Commun 2012 3789
Similar articles in PubMed
Epidemic history of hepatitis C virus infection in two remote communities in Nigeria, West Africa.
Joseph C Forbi
,
Michael A Purdy
,
David S Campo
, Gilberto Vaughan,
Zoya E Dimitrova
,
Lilia M Ganova-Raeva
,
Guo-Liang Xia
, and
Yury E Khudyakov
J. Gen. Virol. 2012 Jul 93(Pt 7) 1410-21
Similar articles in PubMed
Hepatitis C virus antigenic convergence.
David S Campo
,
Zoya Dimitrova
,
Jonny Yokosawa
,
Duc Hoang
,
Nestor O Perez
,
Sumathi Ramachandran
, and
Yury Khudyakov
Scientific reports 2012 2267
Similar articles in PubMed
Temporal variations in the hepatitis C virus intrahost population during chronic infection.
Sumathi Ramachandran
,
David S Campo
,
Zoya E Dimitrova
,
Guo-Liang Xia
,
Michael A Purdy
, and
Yury E Khudyakov
J. Virol. 2011 Jul 85(13) 6369-80
Similar articles in PubMed
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Page last reviewed:
Oct 1, 2020
Page last updated:
Jan 19, 2021
Content source:
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