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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jan 27, 2023. (Total: 4182 publications since 2011)
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Records 1-27 (of 27 Records)
Query Trace: all>>Paul A Rota[CDC Author]
VPipe: an Automated Bioinformatics Platform for Assembly and Management of Viral Next-Generation Sequencing Data.
Darlene D Wagner, Rachel L Marine, Edward Ramos, Terry Fei Fan Ng, Christina J Castro, Margaret Okomo-Adhiambo, Krysten Harvey, Gregory Doho, Reagan Kelly, Yatish Jain, Roman L Tatusov, Hideky Silva, Paul A Rota, Agha N Khan, and M Steven Oberste
Microbiology spectrum 2022 e0256421
Functional Characterization of Circulating Mumps Viruses with Stop Codon Mutations in the Small Hydrophobic Protein.
Rita Czakó Stinnett, Andrew S Beck, Elena N Lopareva, Rebecca J McNall, Donald R Latner, Carole J Hickman, Paul A Rota, and Bettina Bankamp
mSphere 2020 Nov 5(6)
Rapid diagnostic tests to address challenges for global measles surveillance.
David W Brown, Lenesha Warrener, Heather M Scobie, Morgane Donadel, Diane Waku-Kouomou, Mick N Mulders, and Paul A Rota
Current opinion in virology 2020 Jun 4177-84
Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses.
Rachel L Marine, Laura C Magaña, Christina J Castro, Kun Zhao, Anna M Montmayeur, Alexander Schmidt, Marta Diez-Valcarce, Terry Fei Fan Ng, Jan Vinjé, Cara C Burns, W Allan Nix, Paul A Rota, and M Steven Oberste
Journal of virological methods 2020 Apr 113865
Qualitative Variation Among Commercial Immunoassays to Detect Measles-Specific IgG.
Donald R Latner, Sun B Sowers, Kiana Anthony, Heather Colley, Christine Badeau, Jessica Coates, Phili Wong, Yetunde Fakile, Cristina Interiano, Kevin B Pannell, Van Leung-Pineda, Manisha M Patel, Paul A Rota, Brandi M Limbago, and Carole J Hickman
Journal of clinical microbiology 2020 Apr
Genetic Characterization of Mumps Viruses Associated with the Resurgence of Mumps in the United States: 2015-2017.
Rebecca J McNall, Adam K Wharton, Raydel Anderson, Nakia Clemmons, Elena N Lopareva, Carlos Gonzalez, Alex Espinosa, William S Probert, Jill K Hacker, Gongping Liu, Jacob Garfin, Anna Strain, David Boxrud, Patrick W Bryant, Kirsten St George, Timothy Davis, Richard H Griesser, Peter Shult, Bettina Bankamp, Carole J Hickman, Kelly Wroblewski, and Paul A Rota
Virus research 2020 Mar 197935
Identifying Vaccine-associated Rash Illness Amidst a Large Measles Outbreak: Minnesota, 2017.
Karen G Martin, Emily Banerjee, Melissa McMahon, Cynthia Kenyon, Anna Strain, Miriam Halstead Muscoplat, Paul A Gastañaduy, Paul A Rota, Rajal K Mody, and Kristen Ehresmann
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 71(9) e517-e519
Combining genomics and epidemiology to track mumps virus transmission in the United States.
Shirlee Wohl, Hayden C Metsky, Stephen F Schaffner, Anne Piantadosi, Meagan Burns, Joseph A Lewnard, Bridget Chak, Lydia A Krasilnikova, Katherine J Siddle, Christian B Matranga, Bettina Bankamp, Scott Hennigan, Brandon Sabina, Elizabeth H Byrne, Rebecca J McNall, Rickey R Shah, James Qu, Daniel J Park, Soheyla Gharib, Susan Fitzgerald, Paul Barreira, Stephen Fleming, Susan Lett, Paul A Rota, Lawrence C Madoff, Nathan L Yozwiak, Bronwyn L MacInnis, Sandra Smole, Yonatan H Grad, and Pardis C Sabeti
PLoS biology 2020 Feb (2) e3000611
Genetic Characterization of Measles and Rubella Viruses Detected Through Global Measles and Rubella Elimination Surveillance, 2016-2018.
Kevin E Brown, Paul A Rota, James L Goodson, David Williams, Emily Abernathy, Makoto Takeda, and Mick N Mulders
MMWR. Morbidity and mortality weekly report 2019 Jul (26) 587-591
Use of FTA® cards to transport throat swabs and oral fluid samples for molecular detection and genotyping of measles and rubella viruses.
Bettina Bankamp, Carolyn Sein, Elisabeth Pukuta Simbu, Raydel Anderson, Emily Abernathy, Min-Hsin Chen, Jean-Jacques Muyembe Tamfum, Kathleen A Wannemuehler, Diane Waku-Kouomou, Elena N Lopareva, Joseph P Icenogle, Paul A Rota, and James L Goodson
Journal of clinical microbiology 2019 Feb
Strengthening laboratory surveillance of viral pathogens: Experiences and lessons learned building next-generation sequencing capacity in Ghana.
Rachel L Marine, Nana Afia Asante Ntim, Christina J Castro, Keren O Attiku, Deborah Pratt, Ewurabena Duker, Esinam Agbosu, Terry Fei Fan Ng, Wangeci Gatei, Evangeline Obodai, John Kofi Odoom, Chastity L Walker, Paul A Rota, M Steven Oberste, William Kwabena Ampofo, and S Arunmozhi Balajee
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2019 Feb
Differences in antigenic sites and other functional regions between genotype A and G mumps virus surface proteins.
Sigrid Gouma, Tessa Vermeire, Steven Van Gucht, Lennart Martens, Veronik Hutse, Jeroen Cremer, Paul A Rota, Geert Leroux-Roels, Marion Koopmans, Rob van Binnendijk, and Elien Vandermarliere
Scientific reports 2018 Sep 8(1) 13337
Evolutionary analysis of mumps viruses of genotype F collected in mainland China in 2001-2015.
Aili Cui, Pierre Rivailler, Zhen Zhu, Xiuying Deng, Ying Hu, Yan Wang, Fangcai Li, Zhaodan Sun, Jilan He, Yuan Si, Xiaoling Tian, Shujie Zhou, Yake Lei, Huanying Zheng, Paul A Rota, and Wenbo Xu
Scientific reports 2017 Dec (1) 17144
Complete Genome Sequences of Mumps and Measles Virus Isolates from Three States in the United States.
Laura C Magaña, Alex Espinosa, Rachel L Marine, Terry Fei Fan Ng, Christina J Castro, Anna M Montmayeur, Jill K Hacker, Samantha Scott, Thomas Whyte, Bettina Bankamp, M Steven Oberste, and Paul A Rota
Genome announcements 2017 Aug (33)
Rapid identification of measles virus vaccine genotypes by real time PCR.
Felicia Roy, Lillian Mendoza, Joanne Hiebert, Rebecca J McNall, Bettina Bankamp, Sarah Connolly, Amy Lüdde, Nicole Friedrich, Annette Mankertz, Paul A Rota, and Alberto Severini
Journal of clinical microbiology 2016 Nov
Whole-Genome Sequencing During Measles Outbreaks.
Paul A Rota, and Bettina Bankamp
J. Infect. Dis. 2015 Jul 6.
Genomic diversity of mumps virus and global distribution of the 12 genotypes.
Li Jin, Claes Örvell, Richard Myers, Paul A Rota, Tetsuo Nakayama, Dubravko Forcic, Joanne Hiebert, and Kevin E Brown
Rev. Med. Virol. 2015 Mar 25(2) 85-101
Evolutionary genetics of genotype H1 measles viruses in China from 1993 to 2012.
Songtao Xu, Yan Zhang, Pierre Rivailler, Huiling Wang, Yixin Ji, Zhu Zhen, Naiying Mao, Chongshan Li, William J Bellini, Wenbo Xu, and Paul A Rota
J. Gen. Virol. 2014 Sep 95(Pt 9) 1892-9
Wild-type measles viruses with non-standard genome lengths.
Bettina Bankamp, Chunyu Liu, Pierre Rivailler, Jayati Bera, Susmita Shrivastava, Ewen F Kirkness, William J Bellini, and Paul A Rota
PLoS ONE 2014 9(4) e95470
Epidemiologic and genetic characteristics of mumps viruses isolated in China from 1995 to 2010.
Aili Cui, Zhen Zhu, Meng Chen, Huanying Zheng, Leng Liu, Yan Wang, Yan Ma, Changyin Wang, Xueqiang Fang, Ping Li, Ronghui Guan, Shuang Wang, Jianhui Zhou, Lei Zheng, Hui Gao, Zhengrong Ding, Liqun Li, Fang Bo, Zhaodan Sun, Zhenying Zhang, Daxing Feng, Jilan He, Hui Chen, Li Jin, Paul A Rota, and Wenbo Xu
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2014 Jan 21384-90
Elimination of endemic measles, rubella, and congenital rubella syndrome from the Western hemisphere: the US experience.
Mark J Papania, Gregory S Wallace, Paul A Rota, Joseph P Icenogle, Amy Parker Fiebelkorn, Gregory L Armstrong, Susan E Reef, Susan B Redd, Emily S Abernathy, Albert E Barskey, Lijuan Hao, Huong Q McLean, Jennifer S Rota, William J Bellini, and Jane F Seward
JAMA Pediatr 2014 Feb 168(2) 148-55
Improving molecular tools for global surveillance of measles virus.
Bettina Bankamp, Lauren A Byrd-Leotis, Elena N Lopareva, Gibson K S Woo, Chunyu Liu, Youngmee Jee, Hinda Ahmed, Wilina W Lim, Nalini Ramamurty, Mick N Mulders, David Featherstone, William J Bellini, and Paul A Rota
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2013 Sep 58(1) 176-82
Comparison of the sensitivity of laboratory diagnostic methods from a well-characterized outbreak of mumps in New York city in 2009.
Jennifer S Rota, Jennifer B Rosen, Margaret K Doll, Rebecca J McNall, Marcia McGrew, Nobia Williams, Elena N Lopareva, Albert E Barskey, Amado Punsalang, Paul A Rota, William R Oleszko, Carole J Hickman, Christopher M Zimmerman, and William J Bellini
Clin. Vaccine Immunol. 2013 Mar 20(3) 391-6
Poor immune responses of newborn rhesus macaques to measles virus DNA vaccines expressing the hemagglutinin and fusion glycoproteins.
Fernando P Polack, Shari L Lydy, Sok-Hyong Lee, Paul A Rota, William J Bellini, Robert J Adams, Harriet L Robinson, and Diane E Griffin
Clin. Vaccine Immunol. 2013 Feb 20(2) 205-10
Distinct and overlapping roles of Nipah virus P gene products in modulating the human endothelial cell antiviral response.
Michael K Lo, Mark E Peeples, William J Bellini, Stuart T Nichol, Paul A Rota, and Christina F Spiropoulou
PLoS ONE 2012 7(10) e47790
Molecular virology of the henipaviruses.
Paul A Rota, and Michael K Lo
Current topics in microbiology and immunology 2012 35941-58
Genetic characterization of measles vaccine strains.
Bettina Bankamp, Makoto Takeda, Yan Zhang, Wenbo Xu, and Paul A Rota
The Journal of infectious diseases 2011 Jul 204 Suppl 1S533-48
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