CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Sep 22, 2022. (Total: 4021 publications since 2011)

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Records 1-16 (of 16 Records)

Query Trace: all>>Zoya Dimitrova[CDC Author]
Primary case inference in viral outbreaks through analysis of intra-host variant population. J Walker Gussler, David S Campo, Zoya Dimitrova, Pavel Skums, and Yury Khudyakov BMC bioinformatics 2022 23(1) 62 Similar articles in PubMed DOI:10.1186/s12859-022-04585-2
Changing Molecular Epidemiology of Hepatitis A Virus Infection, United States, 1996-2019. Sumathi Ramachandran, Guo-Liang Xia, Zoya Dimitrova, Yulin Lin, Martha Montgomery, Ryan Augustine, Saleem Kamili, and Yury Khudyakov Emerging infectious diseases 2021 27(6) 1742-1745 Similar articles in PubMed DOI:10.3201/eid2706.203036
Efficient error correction for next-generation sequencing of viral amplicons. Pavel Skums, Zoya Dimitrova, David S Campo, Gilberto Vaughan, Livia Rossi, Joseph C Forbi, Jonny Yokosawa, Alex Zelikovsky, and Yury Khudyakov BMC bioinformatics 2012 Jun 13 Suppl 10S6 Similar articles in PubMed DOI:10.1186/1471-2105-13-S10-S6
Hepatitis C virus antigenic convergence. David S Campo, Zoya Dimitrova, Jonny Yokosawa, Duc Hoang, Nestor O Perez, Sumathi Ramachandran, and Yury Khudyakov Scientific reports 2012 2267 Similar articles in PubMed DOI:10.1038/srep00267
HCV transmission in high-risk communities in Bulgaria. Lilia Ganova-Raeva, Zoya Dimitrova, Ivailo Alexiev, Lili Punkova, Amanda Sue, Guo-Liang Xia, Anna Gancheva, Reneta Dimitrova, Asya Kostadinova, Elitsa Golkocheva-Markova, and Yury Khudyakov PloS one 2019 14(3) e0212350 Similar articles in PubMed DOI:10.1371/journal.pone.0212350
A large HCV transmission network enabled a fast-growing HIV outbreak in rural Indiana, 2015. Sumathi Ramachandran, Hong Thai, Joseph C Forbi, Romeo Regi Galang, Zoya Dimitrova, Guo-Liang Xia, Yulin Lin, Lili T Punkova, Pamela R Pontones, Jessica Gentry, Sara J Blosser, Judith Lovchik, William M Switzer, Eyasu Teshale, Philip Peters, John Ward, Yury Khudyakov, and EBioMedicine 2018 Nov Similar articles in PubMed DOI:10.1016/j.ebiom.2018.10.007
QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data. Pavel Skums, Alex Zelikovsky, Rahul Singh, Walker Gussler, Zoya Dimitrova, Sergey Knyazev, Igor Mandric, Sumathi Ramachandran, David Campo, Deeptanshu Jha, Leonid Bunimovich, Elizabeth Costenbader, Connie Sexton, Siobhan O'Connor, Guo-Liang Xia, and Yury Khudyakov Bioinformatics (Oxford, England) 2018 Jan (1) 163-170 Similar articles in PubMed DOI:10.1093/bioinformatics/btx402
GHOST: global hepatitis outbreak and surveillance technology. Atkinson G Longmire, Seth Sims, Inna Rytsareva, David S Campo, Pavel Skums, Zoya Dimitrova, Sumathi Ramachandran, Magdalena Medrzycki, Hong Thai, Lilia Ganova-Raeva, Yulin Lin, Lili T Punkova, Amanda Sue, Massimo Mirabito, Silver Wang, Robin Tracy, Victor Bolet, Thom Sukalac, Chris Lynberg, and Yury Khudyakov BMC genomics 2017 Dec (Suppl 10) 916 Similar articles in PubMed DOI:10.1186/s12864-017-4268-3
Increased Mitochondrial Genetic Diversity in Persons Infected With Hepatitis C Virus. David S Campo, Ha-Jung Roh, Brian L Pearlman, Daniel S Fierer, Sumathi Ramachandran, Gilberto Vaughan, Andrew Hinds, Zoya Dimitrova, Pavel Skums, and Yury Khudyakov Cellular and molecular gastroenterology and hepatology 2016 Sep (5) 676-684 Similar articles in PubMed DOI:10.1016/j.jcmgh.2016.05.012
Network analysis of the chronic Hepatitis C virome defines HVR1 evolutionary phenotypes in the context of humoral immune responses. Brendan A Palmer, Daniel Schmidt-Martin, Zoya Dimitrova, Pavel Skums, Orla Crosbie, Elizabeth Kenny-Walsh, and Liam J Fanning Journal of virology 2015 Dec Similar articles in PubMed DOI:10.1128/JVI.02995-15
Accurate genetic detection of hepatitis C virus transmissions in outbreak settings. David S Campo, Guo-Liang Xia, Zoya Dimitrova, Yulin Lin, Joseph C Forbi, Lilia Ganova-Raeva, Lili Punkova, Sumathi Ramachandran, Hong Thai, Pavel Skums, Seth Sims, Inna Rytsareva, Gilberto Vaughan, Ha-Jung Roh, Michael A Purdy, Amanda Sue, and Yury Khudyakov The Journal of infectious diseases 2015 Nov Similar articles in PubMed DOI:10.1093/infdis/jiv542
Cryptic Hepatitis B and E in Patients With Acute Hepatitis of Unknown Etiology. Lilia Ganova-Raeva, Lili Punkova, David S Campo, Zoya Dimitrova, Pavel Skums, Nga H Vu, Do T Dat, Harry R Dalton, and Yury Khudyakov J. Infect. Dis. 2015 Jun 8. Similar articles in PubMed DOI:10.1093/infdis/jiv315
Good laboratory practice for clinical next-generation sequencing informatics pipelines. Amy S Gargis, Lisa Kalman, David P Bick, Cristina da Silva, David P Dimmock, Birgit H Funke, Sivakumar Gowrisankar, Madhuri R Hegde, Shashikant Kulkarni, Christopher E Mason, Rakesh Nagarajan, Karl V Voelkerding, Elizabeth A Worthey, Nazneen Aziz, John Barnes, Sarah F Bennett, Himani Bisht, Deanna M Church, Zoya Dimitrova, Shaw R Gargis, Nabil Hafez, Tina Hambuch, Fiona C L Hyland, Ruth Ann Luna, Duncan MacCannell, Tobias Mann, Megan R McCluskey, Timothy K McDaniel, Lilia M Ganova-Raeva, Heidi L Rehm, Jeffrey Reid, David S Campo, Richard B Resnick, Perry G Ridge, Marc L Salit, Pavel Skums, Lee-Jun C Wong, Barbara A Zehnbauer, Justin M Zook, and Ira M Lubin Nature biotechnology 2015 Jul (7) 689-93 Similar articles in PubMed DOI:10.1038/nbt.3237
Next-generation sequencing reveals large connected networks of intra-host HCV variants. David S Campo, Zoya Dimitrova, Lilian Yamasaki, Pavel Skums, Daryl Ty Lau, Gilberto Vaughan, Joseph C Forbi, Chong-Gee Teo, and Yury Khudyakov BMC Genomics 2014 15 Suppl 5S4 Similar articles in PubMed DOI:10.1186/1471-2164-15-S5-S4
Convergence and coevolution of hepatitis B virus drug resistance. Hong Thai, David S Campo, James Lara, Zoya Dimitrova, Sumathi Ramachandran, Guoliang Xia, Lilia Ganova-Raeva, Chong-Gee Teo, Anna Lok, and Yury Khudyakov Nat Commun 2012 3789 Similar articles in PubMed DOI:10.1038/ncomms1794
Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling. Pavel Skums, Alexander Artyomenko, Olga Glebova, Sumathi Ramachandran, Ion Mandoiu, David S Campo, Zoya Dimitrova, Alex Zelikovsky, and Yury Khudyakov Bioinformatics 2015 Mar 1. (5) 682-90 Similar articles in PubMed DOI:10.1093/bioinformatics/btu726