CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Jun 02, 2023. (Total: 4301 publications since 2011)

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Records 1-19 (of 19 Records)

Query Trace: all>>Rebecca L Lindsey[CDC Author]
Longitudinal surveillance and comparative characterization of Escherichia albertii in wild raccoons in the United States. Hinenoya A , Wang H , Patrick EM , Zeng X , Cao L , Li XP , Lindsey RL , Gillespie B , He Q , Yamasaki S , Lin J . Microbiol Res 2022 262 127109
Use of Large-Scale Genomics to Identify the Role of Animals and Foods as Potential Sources of Extraintestinal Pathogenic Escherichia coli That Cause Human Illness. Harrison L , Tyson GH , Strain E , Lindsey RL , Strockbine N , Ceric O , Fortenberry GZ , Harris B , Shaw S , Tillman G , Zhao S , Dessai U . Foods 2022 11 (13)
The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States. Stevens EL , Carleton HA , Beal J , Tillman GE , Lindsey RL , Lauer AC , Pightling A , Jarvis KG , Ottesen A , Ramachandran P , Hintz L , Katz LS , Folster JP , Whichard JM , Trees E , Timme RE , McDermott P , Wolpert B , Bazaco M , Zhao S , Lindley S , Bruce BB , Griffin PM , Brown E , Allard M , Tallent S , Irvin K , Hoffmann M , Wise M , Tauxe R , Gerner-Smidt P , Simmons M , Kissler B , Defibaugh-Chavez S , Klimke W , Agarwala R , Lindsay J , Cook K , Austerman SR , Goldman D , McGarry S , Hale KR , Dessai U , Musser SM , Braden C . J Food Prot 2022 85 (5) 755-772
PacBio Genome Sequences of Eight Escherichia albertii Strains Isolated from Humans in the United States. Lindsey RL , Rowe LA , Batra D , Smith P , Strockbine NA . Microbiol Resour Announc 2019 8 (9)
Conjugal Transfer, Whole Genome Sequencing, and Plasmid Analysis of Four mcr-1 -bearing Isolates from U.S. Patients. Zhu W , Lawsin A , Lindsey RL , Batra D , Knipe K , Yoo BB , Perry KA , Rowe LA , Lonsway D , Waters MS , Rasheed JK , Halpin AL . Antimicrob Agents Chemother 2019 63 (4)
PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene. Lindsey RL , Batra D , Smith P , Patel PN , Tagg KA , Garcia-Toledo L , Loparev VN , Juieng P , Sheth M , Joung YJ , Rowe LA . Microbiol Resour Announc 2018 7 (14)
Interlaboratory Evaluation of the U.S. Food and Drug Administration Escherichia coli Identification Microarray for Profiling Shiga Toxin-Producing Escherichia coli. Patel IR , Gangiredla J , Lacher DW , Mammel MK , Bagi L , Baranzoni GM , Fratamico PM , Roberts EL , Deb RoyC , Lindsey RL , VStoneburg D , Martin H , Smith P , Strockbine NA , Elkins CA , Scheutz F , Feng PCH . J Food Prot 2018 81 (8) 1275-1282
High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing. Patel PN , Lindsey RL , Garcia-Toledo L , Rowe LA , Batra D , Whitley SW , Drapeau D , Stoneburg D , Martin H , Juieng P , Loparev VN , Strockbine N . Genome Announc 2018 6 (19)
High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing. Kim J , Lindsey RL , Garcia-Toledo L , Loparev VN , Rowe LA , Batra D , Juieng P , Stoneburg D , Martin H , Knipe K , Smith P , Strockbine N . Genome Announc 2018 6 (15)
High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping. Schroeder MR , Juieng P , Batra D , Knipe K , Rowe LA , Sheth M , Smith P , Garcia-Toledo L , Loparev VN , Lindsey RL . Genome Announc 2018 6 (1)
High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Escherichia coli Strains Generated with PacBio Sequencing. Smith P , Lindsey RL , Rowe LA , Batra D , Stripling D , Garcia-Toledo L , Drapeau D , Knipe K , Strockbine N . Genome Announc 2018 6 (2)
High-Quality Draft Genome Sequences for Four Drug-Resistant or Outbreak-Associated Shigella sonnei Strains Generated with PacBio Sequencing and Whole-Genome Maps. Lindsey Rebecca L, Batra Dhwani, Rowe Lori, N Loparev Vladimir, Juieng Phalasy, Garcia-Toledo Lisley, Bicknese Amelia, Stripling Devon, Martin Haley, Chen Jessica, Strockbine Nancy, Trees Eija.Genome announcements 2017 Aug (35) . Genome announcements 2017 Aug (35)
Multiplex polymerase chain reaction for identification of Escherichia coli, Escherichia albertii and Escherichia fergusonii. Lindsey Rebecca L, Garcia-Toledo L, Fasulo D, Gladney L M, Strockbine N. Journal of microbiological methods 2017 Jun . Journal of microbiological methods 2017 Jun
High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States. Lindsey Rebecca L, Batra Dhwani, Rowe Lori, Loparev Vladimir N, Stripling Devon, Garcia-Toledo Lisley, Knipe Kristen, Juieng Phalasy, Sheth Mili, Martin Haley, Laufer Halpin Alison. Genome announcements 2017 Mar 5(11) . Genome announcements 2017 Mar (11)
High-Quality Draft Genome Sequences for Five Non-O157 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing and Optical Maps. Lindsey Rebecca L, Rowe Lori, Garcia-Toledo Lisley, Loparev Vladimir, Knipe Kristen, Stripling Devon, Martin Haley, Trees Eija, Juieng Phalasy, Batra Dhwani, Strockbine Nancy. Genome announcements 2016 4(3) . Genome announcements 2016 (3)
Implementation of Whole Genome Sequencing (WGS) for Identification and Characterization of Shiga Toxin-Producing Escherichia coli (STEC) in the United States. Lindsey Rebecca L, Pouseele Hannes, Chen Jessica C, Strockbine Nancy A, Carleton Heather A.Frontiers in microbiology 2016 766 . Frontiers in microbiology 2016 766
Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25. Lindsey Rebecca L, Knipe Kristen, Rowe Lori, Garcia-Toledo Lisley, Loparev Vladimir, Juieng Phalasy, Trees Eija, Strockbine Nancy, Stripling Devon, Gerner-Smidt Peter. Genome announcements 2015 3(6) . Genome announcements 2015 3(6)
Evaluating the occurrence of Escherichia albertii in chicken carcass rinses by PCR, Vitek analysis, and sequencing of the rpoB gene. Lindsey Rebecca L, Fedorka-Cray Paula J, Abley Melanie, Turpin Jennifer B, Meinersmann Richard J. Appl. Environ. Microbiol. 2015 Mar 81(5) 1727-34 . Appl. Environ. Microbiol. 2015 Mar 81(5) 1727-34
Draft Whole-Genome Sequences of Nine Non-O157 Shiga Toxin-Producing Escherichia coli Strains. Lindsey Rebecca L, Trees Eija, Sammons Scott, Loparev Vladimir, Frace Mike, Strockbine Nancy, Sabol Ashley L, Sowers Evan, Stripling Devon, Martin Haley, Knipe Kristen, Rowe Lori, Gerner-Smidt Peter. Genome Announc 2014 2(4) . Genome Announc 2014 2(4)