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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Feb 13, 2020. (Total: 2759 publications since 2011)
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Records 1-40 (of 40 Records)
Query Trace: all>>Lori A Rowe[CDC Author]
Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens.
Michael R Weigand, Yanhui Peng, Dhwani Batra, Mark Burroughs, Jamie K Davis, Kristen Knipe, Vladimir N Loparev, Taccara Johnson, Phalasy Juieng, Lori A Rowe, Mili Sheth, Kevin Tang, Yvette Unoarumhi, Margaret M Williams, and M Lucia Tondella
mSystems 2019 Nov (6)
Draft Genome Sequences of Leishmania ( Leishmania ) amazonensis , Leishmania ( Leishmania ) mexicana , and Leishmania ( Leishmania ) aethiopica , Potential Etiological Agents of Diffuse Cutaneous Leishmaniasis.
Dhwani Batra, Wuling Lin, Vidhya Narayanan, Lori A Rowe, Mili Sheth, Yueli Zheng, Vladimir Loparev, and Marcos de Almeida
Microbiology resource announcements 2019 May (20)
PacBio Genome Sequences of Eight Escherichia albertii Strains Isolated from Humans in the United States.
Rebecca L Lindsey, Lori A Rowe, Dhwani Batra, Peyton Smith, and Nancy A Strockbine
Microbiology resource announcements 2019 Feb 8(9)
First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case.
Wuling Lin, Dhwani Batra, Vidhya Narayanan, Lori A Rowe, Mili Sheth, Yueli Zheng, Phalasy Juieng, Vladimir Loparev, and Marcos de Almeida
Microbiology resource announcements 2019 Feb (6)
Conjugal Transfer, Whole Genome Sequencing, and Plasmid Analysis of Four mcr-1 -bearing Isolates from U.S. Patients.
Wenming Zhu, Adrian Lawsin, Rebecca L Lindsey, Dhwani Batra, Kristen Knipe, Brian B Yoo, K Allison Perry, Lori A Rowe, David Lonsway, Maroya S Waters, J Kamile Rasheed, and Alison Laufer Halpin
Antimicrobial agents and chemotherapy 2019 Feb
Draft Genome Sequences of Eight Vibrio sp. Clinical Isolates from across the United States That Form a Basal Sister Clade to Vibrio cholerae.
Kevin Liang, Mohammad Tarequl Islam, Nora Hussain, Nathan S Winkjer, Monica S Im, Lori A Rowe, Cheryl L Tarr, and Yan Boucher
Microbiology resource announcements 2019 Jan 8(3)
Complete Genome Sequence of Nocardia farcinica W6977 T Obtained by Combining Illumina and PacBio Reads.
Christopher A Gulvik, Robert A Arthur, Ben W Humrighouse, Dhwani Batra, Lori A Rowe, Brent A Lasker, and John R McQuiston
Microbiology resource announcements 2019 Jan (3)
Draft Genome Sequence of French Guiana Leishmania ( Viannia ) guyanensis Strain 204-365, Assembled Using Long Reads.
Dhwani Batra, Wuling Lin, Lori A Rowe, Mili Sheth, Yueli Zheng, Vladimir Loparev, and Marcos de Almeida
Microbiology resource announcements 2018 Dec (23)
Complete Genome Sequence of Streptacidiphilus sp. Strain 15-057A, Obtained from Bronchial Lavage Fluid.
Robert A Arthur, Christopher A Gulvik, Ben W Humrighouse, Brent A Lasker, Dhwani Batra, Lori A Rowe, José Mariano Igual, Imen Nouioui, Hans-Peter Klenk, and John R McQuiston
Microbiology resource announcements 2018 Nov 7(19)
PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene.
Rebecca L Lindsey, Dhwani Batra, Peyton Smith, Pooja N Patel, Kaitlin A Tagg, Lisley Garcia-Toledo, Vladimir N Loparev, Phalasy Juieng, Mili Sheth, Yoo Jin Joung, and Lori A Rowe
Microbiology resource announcements 2018 (14)
Detection of minority drug resistant mutations in Malawian HIV-1 subtype C-positive patients initiating and on first-line antiretroviral therapy.
Zhiyong Zhou, Kevin Tang, Guoqing Zhang, Nellie Wadonda-Kabondo, Kundai Moyo, Lori A Rowe, Joshua R DeVos, Nick Wagar, Du-Ping Zheng, Hongxiong Guo, John Nkengasong, Mike Frace, Scott Sammons, and Chunfu Yang
African journal of laboratory medicine 2018 (1) 708
High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing.
Pooja N Patel, Rebecca L Lindsey, Lisley Garcia-Toledo, Lori A Rowe, Dhwani Batra, Samuel W Whitley, Daniel Drapeau, Devon Stoneburg, Haley Martin, Phalasy Juieng, Vladimir N Loparev, and Nancy Strockbine
Genome announcements 2018 May (19)
High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing.
Justin Kim, Rebecca L Lindsey, Lisley Garcia-Toledo, Vladimir N Loparev, Lori A Rowe, Dhwani Batra, Phalasy Juieng, Devon Stoneburg, Haley Martin, Kristen Knipe, Peyton Smith, and Nancy Strockbine
Genome announcements 2018 Apr (15)
Genome Sequence of a Multidrug-Resistant Candida haemulonii Isolate from a Patient with Chronic Leg Ulcers in Israel.
Nancy A Chow, Lalitha Gade, Dhwani Batra, Lori A Rowe, Phalasy Juieng, Ronen Ben-Ami, Vladimir N Loparev, and Anastasia P Litvintseva
Genome announcements 2018 Apr (15)
Genome Sequence of the Amphotericin B-Resistant Candida duobushaemulonii Strain B09383.
Nancy A Chow, Lalitha Gade, Dhwani Batra, Lori A Rowe, Phalasy Juieng, Vladimir N Loparev, and Anastasia P Litvintseva
Genome announcements 2018 Mar (13)
Phenotypic and Genotypic Characterization of Enterobacteriaceae Producing Oxacillinase-48-Like Carbapenemases, United States.
Joseph D Lutgring, Wenming Zhu, Tom J B de Man, Johannetsy J Avillan, Karen F Anderson, David R Lonsway, Lori A Rowe, Dhwani Batra, J Kamile Rasheed, and Brandi M Limbago
Emerging infectious diseases 2018 Apr (4) 700-709
Screening and genomic characterization of filamentous hemagglutinin-deficient Bordetella pertussis.
Michael R Weigand, Lucia C Pawloski, Yanhui Peng, Hong Ju, Mark Burroughs, Pamela K Cassiday, Jamie K Davis, Marina DuVall, Taccara Johnson, Phalasy Juieng, Kristen Knipe, Vladimir N Loparev, Marsenia H Mathis, Lori A Rowe, Mili Sheth, Margaret M Williams, and M Lucia Tondella
Infection and immunity 2018 Jan
High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Escherichia coli Strains Generated with PacBio Sequencing.
Peyton Smith, Rebecca L Lindsey, Lori A Rowe, Dhwani Batra, Devon Stripling, Lisley Garcia-Toledo, Daniel Drapeau, Kristen Knipe, and Nancy Strockbine
Genome announcements 2018 Jan 6(2)
High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping.
Max R Schroeder, Phalasy Juieng, Dhwani Batra, Kristen Knipe, Lori A Rowe, Mili Sheth, Peyton Smith, Lisley Garcia-Toledo, Vladimir N Loparev, and Rebecca L Lindsey
Genome announcements 2018 Jan (1)
Complete Circularized Genome Sequences of Four Strains of Elizabethkingia anophelis, Including Two Novel Strains Isolated from Wild-Caught Anopheles sinensis.
Dong Pei, Ainsley C Nicholson, Jinjin Jiang, Huiying Chen, Anne M Whitney, Aaron Villarma, Melissa Bell, Ben Humrighouse, Lori A Rowe, Mili Sheth, Dhwani Batra, Phalasy Juieng, Vladimir N Loparev, John R McQuiston, Yuhao Lan, Yajun Ma, and Jiannong Xu
Genome announcements 2017 Nov (47)
Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus.
Aaron Villarma, Christopher A Gulvik, Lori A Rowe, Mili Sheth, Phalasy Juieng, Ainsley C Nicholson, Vladimir N Loparev, and John R McQuiston
Genome announcements 2017 Nov (44)
Complete Genome Sequence of Vibrio sp. Strain 2521-89, a Close Relative of Vibrio cholerae Isolated from Lake Water in New Mexico, USA.
Kevin Liang, Fabini D Orata, Nathan S Winkjer, Lori A Rowe, Cheryl L Tarr, and Yan Boucher
Genome announcements 2017 Aug (35)
Complete Genome Sequence of Mycobacteriumchimaera Strain CDC2015-22-71.
Nabeeh A Hasan, Adrian Lawsin, K Allison Perry, Efe Alyanak, Nadege C Toney, Allyson Malecha, Lori A Rowe, Dhwani Batra, Heather Moulton-Meissner, Jeffrey R Miller, Michael Strong, and Alison Laufer Halpin
Genome announcements 2017 Aug (31)
Phylogeography of Burkholderia pseudomallei Isolates, Western Hemisphere.
Jay E Gee, Christopher A Gulvik, Mindy G Elrod, Dhwani Batra, Lori A Rowe, Mili Sheth, and Alex R Hoffmaster
Emerging infectious diseases 2017 Jul 23(7) 1133-1138
Toward a Complete North American Borrelia miyamotoi Genome.
Luke C Kingry, Adam Replogle, Dhwani Batra, Lori A Rowe, Christopher Sexton, Marc Dolan, Neeta Connally, Jeannine M Petersen, and Martin E Schriefer
Genome announcements 2017 Feb (5)
Whole Genome Sequence and Comparative Genomics of the Novel Lyme Borreliosis Causing Pathogen, Borrelia mayonii.
Luke C Kingry, Dhwani Batra, Adam Replogle, Lori A Rowe, Bobbi S Pritt, and Jeannine M Petersen
PloS one 2016 (12) e0168994
The Establishment and Diversification of Epidemic-Associated Serogroup W Meningococcus in the African Meningitis Belt, 1994 to 2012.
Adam C Retchless, Fang Hu, Abdoul-Salam Ouédraogo, Seydou Diarra, Kristen Knipe, Mili Sheth, Lori A Rowe, Lassana Sangaré, Absetou Ky Ba, Soumeya Ouangraoua, Dhwani Batra, Ryan T Novak, Rasmata Ouédraogo Traoré, and Xin Wang
mSphere 1(6)
Complete Genome Sequences for Three Chromosomes of the Burkholderia stabilis Type Strain (ATCC BAA-67).
Julia V Bugrysheva, Blake Cherney, David Sue, Andrew B Conley, Lori A Rowe, Kristen M Knipe, Michael A Frace, Vladimir N Loparev, Julie R Avila, Kevin Anderson, David R Hodge, Segaran P Pillai, and Linda M Weigel
Genome announcements 2016 Nov 4(6)
Spike gene deletion quasispecies in serum of patient with acute MERS-CoV infection.
Xiaoyan Lu, Lori A Rowe, Michael Frace, James Stevens, Glen R Abedi, Osman Elnile, Taleb Banassir, Malak Al-Masri, John T Watson, Abdullah Assiri, and Dean D Erdman
Journal of medical virology 2016 Aug
Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak.
Ainsley C Nicholson, Anne M Whitney, Brian D Emery, Melissa E Bell, Jarrett T Gartin, Ben W Humrighouse, Vladimir N Loparev, Dhwani Batra, Mili Sheth, Lori A Rowe, Phalasy Juieng, Kristen Knipe, Christopher Gulvik, and John R McQuiston
Genome announcements 2016 (3)
Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics.
Katherine E Bowden, Michael R Weigand, Yanhui Peng, Pamela K Cassiday, Scott Sammons, Kristen Knipe, Lori A Rowe, Vladimir Loparev, Mili Sheth, Keeley Weening, M Lucia Tondella, and Margaret M Williams
mSphere 1(3)
Three Genome Sequences of Legionella pneumophila subsp. pascullei Associated with Colonization of a Health Care Facility.
Natalia A Kozak-Muiznieks, Shatavia S Morrison, Scott Sammons, Lori A Rowe, Mili Sheth, Michael Frace, Claressa E Lucas, Vladimir N Loparev, Brian H Raphael, and Jonas M Winchell
Genome announcements 2016 (3)
Whole genome multilocus sequence typing as an epidemiologic tool for Yersinia pestis.
Luke C Kingry, Lori A Rowe, Laurel B Respicio-Kingry, Charles B Beard, Martin E Schriefer, and Jeannine M Petersen
Diagnostic microbiology and infectious disease 2015 Dec
Genetic similarities between Cyclospora cayetanensis and cecum-infecting avian Eimeria spp. in apicoplast and mitochondrial genomes.
Kevin Tang, Yaqiong Guo, Longxian Zhang, Lori A Rowe, Dawn M Roellig, Michael A Frace, Na Li, Shiyou Liu, Yaoyu Feng, and Lihua Xiao
Parasit Vectors 2015 (1) 358
Comparative genomic analysis reveals occurrence of genetic recombination in virulent Cryptosporidium hominis subtypes and telomeric gene duplications in Cryptosporidium parvum.
Yaqiong Guo, Kevin Tang, Lori A Rowe, Na Li, Dawn M Roellig, Kristine Knipe, Michael Frace, Chunfu Yang, Yaoyu Feng, and Lihua Xiao
BMC Genomics 2015 16320
Insights into the environmental reservoir of pathogenic Vibrio parahaemolyticus using comparative genomics.
Tracy H Hazen, Patricia C Lafon, Nancy M Garrett, Tiffany M Lowe, Daniel J Silberger, Lori A Rowe, Michael Frace, Michele B Parsons, Cheryl A Bopp, David A Rasko, and Patricia A Sobecky
Front Microbiol 2015 6204
Draft Genome Sequence of Legionella pneumophila D-5864, a Serogroup 6 Strain.
Shatavia S Morrison, Natalia A Kozak-Muiznieks, Scott Sammons, Lori A Rowe, Mike Frace, and Jonas M Winchell
Genome Announc 2015 3(1)
Genome Sequences of Vibrio navarrensis, a Potential Human Pathogen.
Lori M Gladney, Lee S Katz, Kristen M Knipe, Lori A Rowe, Andrew B Conley, Lavanya Rishishwar, Leonardo Mariño-Ramírez, I King Jordan, and Cheryl L Tarr
Genome Announc 2014 2(6)
Presence, genetic variability, and potential significance of "Candidatus Midichloria mitochondrii" in the lone star tick Amblyomma americanum.
Amanda Jo Williams-Newkirk, Lori A Rowe, Tonya R Mixson-Hayden, and Gregory A Dasch
Exp. Appl. Acarol. 2012 Nov 58(3) 291-300
A distinct lineage of influenza A virus from bats.
Suxiang Tong, Yan Li, Pierre Rivailler, Christina Conrardy, Danilo A Alvarez Castillo, Li-Mei Chen, Sergio Recuenco, James A Ellison, Charles T Davis, Ian A York, Amy S Turmelle, David Moran, Shannon Rogers, Mang Shi, Ying Tao, Michael R Weil, Kevin Tang, Lori A Rowe, Scott Sammons, Xiyan Xu, Michael Frace, Kim A Lindblade, Nancy J Cox, Larry J Anderson, Charles E Rupprecht, and Ruben O Donis
Proc. Natl. Acad. Sci. U.S.A. 2012 Mar 13. 109(11) 4269-74
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