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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 16, 2021. (Total: 3468 publications since 2011)
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Records 1-30 (of 46 Records)
Query Trace: all>>Dhwani Batra[CDC Author]
Complete Genome Sequence of Rhodococcus sp. Strain W8901, a Human Clinical Specimen, Assembled Using MiSeq and MinION Sequence Data.
Christopher A Gulvik, Dhwani Batra, Dakota T Howard, Milli Sheth, Ben W Humrighouse, Justin Lee, John R McQuiston, and Brent A Lasker
Microbiology resource announcements 2021 10(35) e0061321
Characterization of a novel transitional group Rickettsia species (Rickettsia tillamookensis sp. nov.) from the western black-legged tick, Ixodes pacificus.
David T Gauthier, Sandor E Karpathy, Stephanie L Grizzard, Dhwani Batra, Lori A Rowe, and Christopher D Paddock
International journal of systematic and evolutionary microbiology 2021 71(7)
Genomic Surveillance for SARS-CoV-2 Variants Circulating in the United States, December 2020-May 2021.
Prabasaj Paul, Anne Marie France, Yutaka Aoki, Dhwani Batra, Matthew Biggerstaff, Vivien Dugan, Summer Galloway, Aron J Hall, Michael A Johansson, Rebecca J Kondor, Alison Laufer Halpin, Brian Lee, Justin S Lee, Brandi Limbago, Adam MacNeil, Duncan MacCannell, Clinton R Paden, Krista Queen, Heather E Reese, Adam C Retchless, Rachel B Slayton, Molly Steele, Suxiang Tong, Maroya S Walters, David E Wentworth, and Benjamin J Silk
MMWR. Morbidity and mortality weekly report 2021 70(23) 846-850
Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case.
Yvette Unoarumhi, Dhwani Batra, Mili Sheth, Vidhya Narayanan, Wuling Lin, Yueli Zheng, Lori A Rowe, Jan Pohl, and Marcos de Almeida
Microbiology resource announcements 2021 10(20)
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri.
Ibne Karim M Ali, Alyssa Kelley, Sandeep J Joseph, Subin Park, Shantanu Roy, Jonathan Jackson, Jennifer R Cope, Lori A Rowe, Mark Burroughs, Mili Sheth, Dhwani Batra, and Vladimir Loparev
Microbiology resource announcements 2021 10(15)
Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris.
José F Muñoz, Rory M Welsh, Terrance Shea, Dhwani Batra, Lalitha Gade, Dakota Howard, Lori A Rowe, Jacques F Meis, Anastasia P Litvintseva, and Christina A Cuomo
Genetics 2021
Complete and Circularized Bacterial Genome Sequence of Gordonia sp. Strain X0973
Christopher A Gulvik, Dhwani Batra, Lori A Rowe, Milli Sheth, Sarah Nobles, Justin S Lee, John R McQuiston, and Brent A Lasker
Microbiology resource announcements 2021 10(9)
Complete and Circularized Genome Assemblies of the Kroppenstedtia eburnea Genus Type Strain and the Kroppenstedtia pulmonis Species Type Strain with MiSeq and MinION Sequence Data.
Christopher A Gulvik, Dhwani Batra, Lori A Rowe, Milli Sheth, Ben W Humrighouse, Dakota T Howard, Justin Lee, John R McQuiston, and Brent A Lasker
Microbiology resource announcements 2020 Oct 9(44)
Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas , eleven species to the genus Kaistella , and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens.
Ainsley C Nicholson, Christopher A Gulvik, Anne M Whitney, Ben W Humrighouse, Melissa E Bell, Barry Holmes, Arnie G Steigerwalt, Aaron Villarma, Mili Sheth, Dhwani Batra, Lori A Rowe, Mark Burroughs, Jessica C Pryor, Jean-François Bernardet, Celia Hugo, Peter Kämpfer, Jeffrey D Newman, and John R McQuiston
International journal of systematic and evolutionary microbiology 2020 Jan
Multispecies Outbreak of Verona Integron-Encoded Metallo-ß-Lactamase-Producing Multidrugresistant Bacteria Driven by a Promiscuous Incompatibility Group A/C2.
Tom J B de Man, Anna Q Yaffee, Wenming Zhu, Dhwani Batra, Efe Alyanak, Lori A Rowe, Gillian McAllister, Heather Moulton-Meissner, Sandra Boyd, Andrea Flinchum, Rachel B Slayton, Steven Hancock, Maroya Spalding Walters, Alison Laufer Halpin, James Kamile Rasheed, Judith Noble-Wang, Alexander J Kallen, and Brandi M Limbago
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Apr
Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens.
Michael R Weigand, Yanhui Peng, Dhwani Batra, Mark Burroughs, Jamie K Davis, Kristen Knipe, Vladimir N Loparev, Taccara Johnson, Phalasy Juieng, Lori A Rowe, Mili Sheth, Kevin Tang, Yvette Unoarumhi, Margaret M Williams, and M Lucia Tondella
mSystems 2019 Nov (6)
Draft Genome Sequences of Leishmania ( Leishmania ) amazonensis , Leishmania ( Leishmania ) mexicana , and Leishmania ( Leishmania ) aethiopica , Potential Etiological Agents of Diffuse Cutaneous Leishmaniasis.
Dhwani Batra, Wuling Lin, Vidhya Narayanan, Lori A Rowe, Mili Sheth, Yueli Zheng, Vladimir Loparev, and Marcos de Almeida
Microbiology resource announcements 2019 May (20)
PacBio Genome Sequences of Eight Escherichia albertii Strains Isolated from Humans in the United States.
Rebecca L Lindsey, Lori A Rowe, Dhwani Batra, Peyton Smith, and Nancy A Strockbine
Microbiology resource announcements 2019 Feb 8(9)
First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case.
Wuling Lin, Dhwani Batra, Vidhya Narayanan, Lori A Rowe, Mili Sheth, Yueli Zheng, Phalasy Juieng, Vladimir Loparev, and Marcos de Almeida
Microbiology resource announcements 2019 Feb (6)
Conjugal Transfer, Whole Genome Sequencing, and Plasmid Analysis of Four mcr-1 -bearing Isolates from U.S. Patients.
Wenming Zhu, Adrian Lawsin, Rebecca L Lindsey, Dhwani Batra, Kristen Knipe, Brian B Yoo, K Allison Perry, Lori A Rowe, David Lonsway, Maroya S Waters, J Kamile Rasheed, and Alison Laufer Halpin
Antimicrobial agents and chemotherapy 2019 Feb
Complete Genome Sequence of Nocardia farcinica W6977 T Obtained by Combining Illumina and PacBio Reads.
Christopher A Gulvik, Robert A Arthur, Ben W Humrighouse, Dhwani Batra, Lori A Rowe, Brent A Lasker, and John R McQuiston
Microbiology resource announcements 2019 Jan (3)
Draft Genome Sequence of French Guiana Leishmania ( Viannia ) guyanensis Strain 204-365, Assembled Using Long Reads.
Dhwani Batra, Wuling Lin, Lori A Rowe, Mili Sheth, Yueli Zheng, Vladimir Loparev, and Marcos de Almeida
Microbiology resource announcements 2018 Dec (23)
Complete Genome Sequence of Streptacidiphilus sp. Strain 15-057A, Obtained from Bronchial Lavage Fluid.
Robert A Arthur, Christopher A Gulvik, Ben W Humrighouse, Brent A Lasker, Dhwani Batra, Lori A Rowe, José Mariano Igual, Imen Nouioui, Hans-Peter Klenk, and John R McQuiston
Microbiology resource announcements 2018 Nov 7(19)
PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene.
Rebecca L Lindsey, Dhwani Batra, Peyton Smith, Pooja N Patel, Kaitlin A Tagg, Lisley Garcia-Toledo, Vladimir N Loparev, Phalasy Juieng, Mili Sheth, Yoo Jin Joung, and Lori A Rowe
Microbiology resource announcements 2018 (14)
High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing.
Pooja N Patel, Rebecca L Lindsey, Lisley Garcia-Toledo, Lori A Rowe, Dhwani Batra, Samuel W Whitley, Daniel Drapeau, Devon Stoneburg, Haley Martin, Phalasy Juieng, Vladimir N Loparev, and Nancy Strockbine
Genome announcements 2018 May (19)
Genome Sequence of a Multidrug-Resistant Candida haemulonii Isolate from a Patient with Chronic Leg Ulcers in Israel.
Nancy A Chow, Lalitha Gade, Dhwani Batra, Lori A Rowe, Phalasy Juieng, Ronen Ben-Ami, Vladimir N Loparev, and Anastasia P Litvintseva
Genome announcements 2018 Apr (15)
High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing.
Justin Kim, Rebecca L Lindsey, Lisley Garcia-Toledo, Vladimir N Loparev, Lori A Rowe, Dhwani Batra, Phalasy Juieng, Devon Stoneburg, Haley Martin, Kristen Knipe, Peyton Smith, and Nancy Strockbine
Genome announcements 2018 Apr (15)
Genome Sequence of the Amphotericin B-Resistant Candida duobushaemulonii Strain B09383.
Nancy A Chow, Lalitha Gade, Dhwani Batra, Lori A Rowe, Phalasy Juieng, Vladimir N Loparev, and Anastasia P Litvintseva
Genome announcements 2018 Mar (13)
Phenotypic and Genotypic Characterization of Enterobacteriaceae Producing Oxacillinase-48-Like Carbapenemases, United States.
Joseph D Lutgring, Wenming Zhu, Tom J B de Man, Johannetsy J Avillan, Karen F Anderson, David R Lonsway, Lori A Rowe, Dhwani Batra, J Kamile Rasheed, and Brandi M Limbago
Emerging infectious diseases 2018 Apr (4) 700-709
High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Escherichia coli Strains Generated with PacBio Sequencing.
Peyton Smith, Rebecca L Lindsey, Lori A Rowe, Dhwani Batra, Devon Stripling, Lisley Garcia-Toledo, Daniel Drapeau, Kristen Knipe, and Nancy Strockbine
Genome announcements 2018 Jan 6(2)
High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping.
Max R Schroeder, Phalasy Juieng, Dhwani Batra, Kristen Knipe, Lori A Rowe, Mili Sheth, Peyton Smith, Lisley Garcia-Toledo, Vladimir N Loparev, and Rebecca L Lindsey
Genome announcements 2018 Jan (1)
Complete Circularized Genome Sequences of Four Strains of Elizabethkingia anophelis, Including Two Novel Strains Isolated from Wild-Caught Anopheles sinensis.
Dong Pei, Ainsley C Nicholson, Jinjin Jiang, Huiying Chen, Anne M Whitney, Aaron Villarma, Melissa Bell, Ben Humrighouse, Lori A Rowe, Mili Sheth, Dhwani Batra, Phalasy Juieng, Vladimir N Loparev, John R McQuiston, Yuhao Lan, Yajun Ma, and Jiannong Xu
Genome announcements 2017 Nov (47)
High-Quality Draft Genome Sequences for Four Drug-Resistant or Outbreak-Associated Shigella sonnei Strains Generated with PacBio Sequencing and Whole-Genome Maps.
Rebecca L Lindsey, Dhwani Batra, Lori Rowe, Vladimir N Loparev, Phalasy Juieng, Lisley Garcia-Toledo, Amelia Bicknese, Devon Stripling, Haley Martin, Jessica Chen, Nancy Strockbine, and Eija Trees
Genome announcements 2017 Aug (35)
Two novel poxviruses with unusual genome rearrangements: NY_014 and Murmansk.
Chad Smithson, Hermann Meyer, Crystal M Gigante, Jinxin Gao, Hui Zhao, Dhwani Batra, Inger Damon, Chris Upton, and Yu Li
Virus genes 2017 Jul
Phylogeography of Burkholderia pseudomallei Isolates, Western Hemisphere.
Jay E Gee, Christopher A Gulvik, Mindy G Elrod, Dhwani Batra, Lori A Rowe, Mili Sheth, and Alex R Hoffmaster
Emerging infectious diseases 2017 Jul 23(7) 1133-1138
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