Skip directly to search
Skip directly to A to Z list
Skip directly to navigation
Skip directly to page options
Skip directly to site content
Start of Search Controls
Search Form Controls
Search The CDC
submit
CDC A-Z Index
MENU
CDC A-Z
SEARCH
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
#
Search Form Controls
Search The CDC
submit
CDC A-Z Index
Public Health Genomics and Precision Health Knowledge Base (v8.2)
Note: Javascript is disabled or is not supported by your browser. For this reason, some items on this page will be unavailable. For more information about this message, please visit this page:
About CDC.gov
.
PHGKB
About
Specialized PHGKB
Cancer PHGKB
Diabetes PHGKB
Infectious Diseases PHGKB
HLBS-PopOmics
Rare Diseases PHGKB
Health Equity PHGKB
Family Health History PHGKB
Reproductive and Child Health PHGKB
Pharmacogenomics PHGKB
Neurological Disorders PHGKB
Primary Immune Deficiency Diseases PHGKB
Environmental Health PHGKB
Genomics (A-Z)
Office of Genomics and Precision Public Health
State Public Health Genomics Programs Map
Genomics Precision Health Weekly Scan
(Current Edition)
Advanced Molecular Detection Weekly Clips
(Current Edition)
Non-Genomics Precision Health Weekly Scan
(Current Edition)
CDC-authored Publications Update
COVID-19 Precision Health Weekly Update
(Current Edition)
All Databases
COVID-19 GPH (43138)
CDC/NIH Web Information Database (30786)
CDC-Authored Genomics and Precision Health Publications Database (4179)
Precision Health Database (52264)
Tier-Classified Guidelines Database (509)
State Public Health Genomics Programs Database (319)
Pathogen Advanced Molecular Detection Database (23888)
All of Us Reports and Publications Database (275)
HuGE Navigator
Phenopedia (3416)
Genopedia (16402)
HuGE Literature Finder (169507)
Variant Name Mapper (18583)
Release Note
Contact Us
CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB
CDC-Authored Genomics and Precision Health Publications Database
Last data update: Jan 26, 2023
. (Total: 4179 publications since 2011)
All
HLBS
RCH
FHH
Equity
Diabetes
Rare
Cancer
COVID-19
ND
PGx
PI
Environmental
dataset
Filtered By:
Select to fine-tune your search
CDC Author
Year
Journal
Records 1-20 (of 20 Records)
Query Trace:
all>>Alison Laufer Halpin[CDC Author]
Whole-Genome Sequencing Reveals Diversity of Carbapenem-Resistant Pseudomonas aeruginosa Collected through CDC's Emerging Infections Program, United States, 2016-2018.
Richard A Stanton
,
Davina Campbell
,
Gillian A McAllister
,
Erin Breaker
,
Michelle Adamczyk
,
Jonathan B Daniels
,
Joseph D Lutgring
,
Maria Karlsson
, Kyle Schutz, Jesse T Jacob, Lucy E Wilson, Elisabeth Vaeth, Linda Li, Ruth Lynfield, Paula M Snippes Vagnone, Erin C Phipps, Emily B Hancock, Ghinwa Dumyati, Rebecca Tsay, P Maureen Cassidy, Jacquelyn Mounsey,
Julian E Grass
,
Sandra N Bulens
,
Maroya Spalding Walters
, and
Alison Laufer Halpin
Antimicrobial agents and chemotherapy 2022 e0049622
Similar articles in PubMed
DOI:
10.1128/aac.00496-22
Molecular Epidemiology of Carbapenem-Resistant Acinetobacter baumannii in the United States, 2013-2017.
Susannah L McKay
,
Nicholas Vlachos
,
Jonathan B Daniels
,
Valerie S Albrecht
,
Valerie A Stevens
,
J Kamile Rasheed
, J Kristie Johnson,
Joseph D Lutgring
,
Maria Sjölund-Karlsson
, and
Alison Laufer Halpin
Microbial drug resistance (Larchmont, N.Y.) 2022
Similar articles in PubMed
DOI:
10.1089/mdr.2021.0352
Sentinel Surveillance Reveals Emerging Daptomycin-Resistant ST736 Enterococcus faecium and Multiple Mechanisms of Linezolid Resistance in Enterococci in the United States.
Amy S Gargis
, Lori M Spicer, Alyssa G Kent,
Wenming Zhu
,
Davina Campbell
,
Gillian McAllister
, Thomas O Ewing,
Valerie Albrecht
,
Valerie A Stevens
,
Mili Sheth
, Jasmine Padilla,
Dhwani Batra
, J Kristie Johnson,
Alison Laufer Halpin
,
J Kamile Rasheed
,
Christopher A Elkins
,
Maria Karlsson
, and
Joseph D Lutgring
Frontiers in microbiology 2022 12807398
Similar articles in PubMed
DOI:
10.3389/fmicb.2021.807398
Genomic Surveillance for SARS-CoV-2 Variants: Predominance of the Delta (B.1.617.2) and Omicron (B.1.1.529) Variants - United States, June 2021-January 2022.
Anastasia S Lambrou
,
Philip Shirk
,
Molly K Steele
,
Prabasaj Paul
,
Clinton R Paden
,
Betsy Cadwell
,
Heather E Reese
,
Yutaka Aoki
,
Norman Hassell
, Xiao-Yu Zheng,
Sarah Talarico
,
Jessica C Chen
,
M Steven Oberste
,
Dhwani Batra
,
Laura K McMullan
,
Alison Laufer Halpin
,
Summer E Galloway
,
Duncan R MacCannell
,
Rebecca Kondor
,
John Barnes
,
Adam MacNeil
,
Benjamin J Silk
,
Vivien G Dugan
,
Heather M Scobie
,
David E Wentworth
, ,
MMWR. Morbidity and mortality weekly report 2022 71(6) 206-211
Similar articles in PubMed
DOI:
10.15585/mmwr.mm7106a4
Investigation of Bacterial Infections Among Patients Treated With Umbilical Cord Blood-Derived Products Marketed as Stem Cell Therapies.
Kathleen P Hartnett
,
Krista M Powell
, Danielle Rankin,
Paige Gable
, Janice J Kim, Samantha Spoto,
Erin Breaker
, Robert Hunter, Nychie Dotson,
Gillian McAllister
,
Valerie Stevens
,
Alison Laufer Halpin
,
Hollis Houston
, Erin Epson, Mary Malarkey, Melissa Mendoza, Lorrie McNeill, and
Kiran M Perkins
JAMA network open 2021 4(10) e2128615
Similar articles in PubMed
DOI:
10.1001/jamanetworkopen.2021.28615
Detection and Characterization of Targeted Carbapenem-Resistant Healthcare-Associated Threats: Findings from The Antibiotic Resistance Laboratory Network, 2017-2019.
Sarah Sabour
,
Jennifer Y Huang
,
Amelia Bhatnagar
,
Sarah E Gilbert
,
Maria Karlsson
,
David Lonsway
,
Joseph D Lutgring
,
J Kamile Rasheed
,
Alison Laufer Halpin
,
Richard A Stanton
,
Stephanie Gumbis
,
Christopher A Elkins
, and
Allison C Brown
Antimicrobial agents and chemotherapy 2021 AAC0110521
Similar articles in PubMed
DOI:
10.1128/AAC.01105-21
Framing Bacterial Genomics for Public Health(care).
Alison Laufer Halpin
,
L Clifford McDonald
, and
Christopher A Elkins
Journal of clinical microbiology 2021 JCM0013521
Similar articles in PubMed
DOI:
10.1128/JCM.00135-21
A Comprehensive Approach to Ending an Outbreak of Rare bla OXA-72 gene-positive Carbapenem-resistant Acinetobacter baumannii at a Community Hospital, Kansas City, MO, 2018
David S McKinsey, Carolyn Gasser, Joel P McKinsey, Geri Ditto, Alyssa Agard, Brianna Zellmer, Carrie Poteete, Paula Snippes Vagnone, Jennifer L Dale, John Bos, Rachael Hahn, George Turabelidze, Madison Poiry, Patrick Franklin,
Nicholas Vlachos
,
Gillian A McAllister
,
Alison Laufer Halpin
,
Janet Glowicz
,
D Cal Ham
, and
Lauren Epstein
American journal of infection control 2021
Similar articles in PubMed
DOI:
10.1016/j.ajic.2021.03.022
Characterization of Clostridioides difficile Isolates Available through the CDC & FDA Antibiotic Resistance Isolate Bank.
Ashley Paulick
, Michelle Adamczyk,
Karen Anderson
,
Nick Vlachos
,
María-José Machado
,
Gillian McAllister
,
Lauren Korhonen
,
Alice Y Guh
,
Alison Laufer Halpin
,
J Kamile Rasheed
,
Maria Karlsson
,
Joseph D Lutgring
,
Amy S Gargis
, and
Microbiology resource announcements 2021 Jan 10(1)
Similar articles in PubMed
DOI:
10.1128/MRA.01011-20
Development and application of a core genome multilocus sequence typing scheme for the healthcare-associated pathogen Pseudomonas aeruginosa .
Richard A Stanton
,
Gillian McAllister
,
Jonathan B Daniels
,
Erin Breaker
,
Nicholas Vlachos
,
Paige Gable
,
Heather Moulton-Meissner
, and
Alison Laufer Halpin
Journal of clinical microbiology 2020 Jun
Similar articles in PubMed
DOI:
10.1128/JCM.00214-20
Multicenter Outbreak of Gram-Negative Bloodstream Infections in Hemodialysis Patients.
Shannon A Novosad
,
Jason Lake
,
Duc Nguyen
,
Elizabeth Soda
,
Heather Moulton-Meissner
, Mai T Pho,
Nicole Gualandi
,
Lurit Bepo
,
Richard A Stanton
,
Jonathan B Daniels
, George Turabelidze, Kristen Van Allen,
Matthew Arduino
,
Alison Laufer Halpin
, Jennifer Layden, and
Priti R Patel
American journal of kidney diseases : the official journal of the National Kidney Foundation 2019 Jul
Similar articles in PubMed
DOI:
10.1053/j.ajkd.2019.05.012
Sepsis Attributed to Bacterial Contamination of Platelets Associated with a Potential Common Source - Multiple States, 2018.
Sydney A Jones
,
Jefferson M Jones
, Vivian Leung, Allyn K Nakashima, Kelly F Oakeson, Amanda R Smith, Robert Hunter, Janice J Kim, Melissa Cumming, Eileen McHale, Pampee P Young, Joy L Fridey, Walter E Kelley, Susan L Stramer, Stephen J Wagner, F Bernadette West, Ross Herron, Edward Snyder, Jeanne E Hendrickson, David R Peaper, Adi V Gundlapalli, Charles Langelier, Steve Miller, Ashok Nambiar, Morvarid Moayeri, Jack Kamm,
Heather Moulton-Meissner
,
Pallavi Annambhotla
,
Paige Gable
,
Gillian A McAllister
,
Erin Breaker
,
Erisa Sula
,
Alison Laufer Halpin
, and
Sridhar V Basavaraju
MMWR. Morbidity and mortality weekly report 2019 Jun (23) 519-523
Similar articles in PubMed
DOI:
10.15585/mmwr.mm6823a2
Development and Validation of a Clinical Laboratory Improvement Amendments-Compliant Multiplex Real-Time PCR Assay for Detection of mcr Genes.
Jonathan B Daniels
,
Davina Campbell
,
Sandra Boyd
,
Uzma Ansari
,
Joseph Lutgring
,
J Kamile Rasheed
,
Alison Laufer Halpin
, and
Maria Sjölund-Karlsson
Microbial drug resistance (Larchmont, N.Y.) 2019 Apr
Similar articles in PubMed
DOI:
10.1089/mdr.2018.0417
Genomic Analysis of Cardiac Surgery-Associated Mycobacterium chimaera Infections, United States.
Nabeeh A Hasan, L Elaine Epperson,
Adrian Lawsin
, Rachael R Rodger,
Kiran M Perkins
,
Alison Laufer Halpin
,
K Allison Perry
,
Heather Moulton-Meissner
, Daniel J Diekema,
Matthew B Crist
,
Joseph F Perz
, Max Salfinger, Charles L Daley, and Michael Strong
Emerging infectious diseases 2019 Mar (3) 559-563
Similar articles in PubMed
DOI:
10.3201/eid2503.181282
Conjugal Transfer, Whole Genome Sequencing, and Plasmid Analysis of Four mcr-1 -bearing Isolates from U.S. Patients.
Wenming Zhu
,
Adrian Lawsin
,
Rebecca L Lindsey
,
Dhwani Batra
,
Kristen Knipe
,
Brian B Yoo
,
K Allison Perry
,
Lori A Rowe
,
David Lonsway
,
Maroya S Waters
,
J Kamile Rasheed
, and
Alison Laufer Halpin
Antimicrobial agents and chemotherapy 2019 Feb
Similar articles in PubMed
DOI:
10.1128/AAC.02417-18
Gastrointestinal microbiota disruption and risk of colonization with carbapenem-resistant Pseudomonas aeruginosa in ICU patients.
Melinda M Pettigrew, Janneane F Gent, Yong Kong,
Alison Laufer Halpin
, Lisa Pineles, Anthony D Harris, and J Kristie Johnson
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Nov
Similar articles in PubMed
DOI:
10.1093/cid/ciy936
Transmission of Mobile Colistin Resistance (mcr-1) by Duodenoscope.
Erica S Shenoy, Virginia M Pierce,
Maroya Spalding Walters
,
Heather Moulton-Meissner
,
Adrian Lawsin
,
David Lonsway
,
Alicia Shugart
,
Gillian McAllister
,
Alison Laufer Halpin
, Alejandra Zambrano-Gonzalez, Erin E Ryan, Dolores Suslak, Alexandra DeJesus, Kerri Barton, Lawrence C Madoff, Eileen McHale, Alfred DeMaria, and David C Hooper
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2018 Sep
Similar articles in PubMed
DOI:
10.1093/cid/ciy683
Genomic Analysis of a Pan-Resistant Isolate of Klebsiella pneumoniae , United States 2016.
Tom J B de Man
, Joseph D Lutgring,
David R Lonsway
,
Karen F Anderson
, Julia A Kiehlbauch, Lei Chen,
Maroya Spalding Walters
,
Maria Sjölund-Karlsson
,
J Kamile Rasheed
,
Alexander Kallen
, and
Alison Laufer Halpin
mBio 2018 Apr 9(2)
Similar articles in PubMed
DOI:
10.1128/mBio.00440-18
Mycoplasma hominis Infections Transmitted Through Amniotic Tissue Product.
Shannon A Novosad
,
Sridhar V Basavaraju
,
Pallavi Annambhotla
, Marika Mohr,
Alison Laufer Halpin
, Linda Foy, Richard Chmielewski,
Jonas M Winchell
,
Alvaro J Benitez
,
Shatavia S Morrison
,
Taccara Johnson
, Donna M Crabb, Amy E Ratliff, Ken Waites, and
Matthew J Kuehnert
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2017 Oct 65(7) 1152-1158
Similar articles in PubMed
DOI:
10.1093/cid/cix507
Intestinal microbiome disruption in patients in a long-term acute care hospital: A case for development of microbiome disruption indices to improve infection prevention.
Alison Laufer Halpin
,
Tom J B de Man
, Colleen S Kraft,
K Allison Perry
, Austin W Chan, Sung Lieu, Jeffrey Mikell,
Brandi M Limbago
, and
L Clifford McDonald
American journal of infection control 2016 Feb
Similar articles in PubMed
DOI:
10.1016/j.ajic.2016.01.003
File Formats Help:
How do I view different file formats (PDF, DOC, PPT, MPEG) on this site?
Adobe PDF file
Microsoft PowerPoint file
Microsoft Word file
Microsoft Excel file
Audio/Video file
Apple Quicktime file
RealPlayer file
Text file
Zip Archive file
SAS file
ePub file
Page last reviewed:
Jul 25, 2022
Page last updated:
Jan 26, 2023
Content source:
Office of Genomics and Precision Public Health
,
CDC Office of Science
TOP