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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Mar 22, 2023. (Total: 4244 publications since 2011)
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Records 1-30 (of 43 Records)
Query Trace: all>>John W Barnwell[CDC Author]
The first complete genome of the simian malaria parasite Plasmodium brasilianum.
Marko Bajic, Shashidhar Ravishankar, Mili Sheth, Lori A Rowe, M Andreina Pacheco, Dhruviben S Patel, Dhwani Batra, Vladimir Loparev, Christian Olsen, Ananias A Escalante, Fredrik Vannberg, Venkatachalam Udhayakumar, John W Barnwell, and Eldin Talundzic
Scientific reports 2022 12(1) 19802
Multiplex malaria antigen detection by bead-based assay and molecular confirmation by PCR shows no evidence of Pfhrp2 and Pfhrp3 deletion in Haiti.
Camelia Herman, Curtis S Huber, Sophie Jones, Laura Steinhardt, Mateusz M Plucinski, Jean F Lemoine, Michelle Chang, John W Barnwell, Venkatachalam Udhayakumar, and Eric Rogier
Malaria journal 2019 Nov (1) 380
Distinct amino acid and lipid perturbations characterize acute versus chronic malaria.
Regina Joice Cordy, Rapatbhorn Patrapuvich, Loukia N Lili, Monica Cabrera-Mora, Jung-Ting Chien, Gregory K Tharp, Manoj Khadka, Esmeralda Vs Meyer, Stacey A Lapp, Chester J Joyner, AnaPatricia Garcia, Sophia Banton, ViLinh Tran, Viravarn Luvira, Siriwan Rungin, Teerawat Saeseu, Nattawan Rachaphaew, Suman B Pakala, Jeremy D DeBarry, , Jessica C Kissinger, Eric A Ortlund, Steven E Bosinger, John W Barnwell, Dean P Jones, Karan Uppal, Shuzhao Li, Jetsumon Sattabongkot, Alberto Moreno, and Mary R Galinski
JCI insight 2019 May 4(9)
Transcriptome profiling of Plasmodium vivax in Saimiri monkeys identifies potential ligands for invasion.
Karthigayan Gunalan, Juliana M Sá, Roberto R Moraes Barros, Sarah L Anzick, Ramoncito L Caleon, J Patrick Mershon, Kishore Kanakabandi, Monica Paneru, Kimmo Virtaneva, Craig Martens, John W Barnwell, Jose M Ribeiro, and Louis H Miller
Proceedings of the National Academy of Sciences of the United States of America 2019 Mar
A large scale Plasmodium vivax- Saimiri boliviensis trophozoite-schizont transition proteome.
D C Anderson, Stacey A Lapp, John W Barnwell, and Mary R Galinski
PloS one 2017 (8) e0182561
Molecular profile of malaria drug resistance markers of Plasmodium falciparum in Suriname.
Stella M Chenet, Sheila Akinyi Okoth, Julia Kelley, Naomi Lucchi, Curtis S Huber, Stephen Vreden, Alexandre Macedo de Oliveira, John W Barnwell, Venkatachalam Udhayakumar, and Malti R Adhin
Antimicrobial agents and chemotherapy 2017 Apr
Histidine-rich protein 2 (pfhrp2) and pfhrp3 gene deletions in Plasmodium falciparum isolates from select sites in Brazil and Bolivia.
Giselle Maria Rachid Viana, Sheila Akinyi Okoth, Luciana Silva-Flannery, Danielle Regina Lima Barbosa, Alexandre Macedo de Oliveira, Ira F Goldman, Lindsay C Morton, Curtis Huber, Arletta Anez, Ricardo Luiz Dantas Machado, Luís Marcelo Aranha Camargo, Suiane Costa Negreiros do Valle, Marinete Marins Póvoa, Venkatachalam Udhayakumar, and John W Barnwell
PloS one 2017 12(3) e0171150
First Full Draft Genome Sequence of Plasmodium brasilianum.
Eldin Talundzic, Shashidhar Ravishankar, Vishal Nayak, Dhruviben S Patel, Christian Olsen, Mili Sheth, Dhwani Batra, Vladimir Loparev, Fredrik O Vannberg, Venkatachalam Udhayakumar, and John W Barnwell
Genome announcements 2017 Feb (6)
Plasmodium malariae and P. ovale genomes provide insights into malaria parasite evolution.
Gavin G Rutledge, Ulrike Böhme, Mandy Sanders, Adam J Reid, James A Cotton, Oumou Maiga-Ascofare, Abdoulaye A Djimdé, Tobias O Apinjoh, Lucas Amenga-Etego, Magnus Manske, John W Barnwell, François Renaud, Benjamin Ollomo, Franck Prugnolle, Nicholas M Anstey, Sarah Auburn, Ric N Price, James S McCarthy, Dominic P Kwiatkowski, Chris I Newbold, Matthew Berriman, and Thomas D Otto
Nature 2017 Jan
Evaluation of the Illumigene Malaria LAMP: A Robust Molecular Diagnostic Tool for Malaria Parasites.
Naomi W Lucchi, Marie Gaye, Mammadou Alpha Diallo, Ira F Goldman, Dragan Ljolje, Awa Bineta Deme, Aida Badiane, Yaye Die Ndiaye, John W Barnwell, Venkatachalam Udhayakumar, and Daouda Ndiaye
Scientific reports 2016 Nov 36808
Genetic Characterisation of Plasmodium falciparum Isolates with Deletion of the pfhrp2 and/or pfhrp3 Genes in Colombia: The Amazon Region, a Challenge for Malaria Diagnosis and Control.
Erika Jimena Dorado, Sheila Akinyi Okoth, Lidia Madeline Montenegro, Gustavo Diaz, John W Barnwell, Venkatachalam Udhayakumar, and Claribel Murillo Solano
PloS one 2016 (9) e0163137
High-Quality Genome Assembly and Annotation for Plasmodium coatneyi, Generated Using Single-Molecule Real-Time PacBio Technology.
Jung-Ting Chien, Suman B Pakala, Juliana A Geraldo, Stacey A Lapp, Jay C Humphrey, John W Barnwell, Jessica C Kissinger, and Mary R Galinski
Genome announcements 2016 (5)
Quantifying the removal of red blood cells in Macaca mulatta during a Plasmodium coatneyi infection.
Luis L Fonseca, Harnel S Alezi, Alberto Moreno, John W Barnwell, Mary R Galinski, and Eberhard O Voit
Malaria journal 15(1) 410
Plasmodium falciparum Drug-Resistant Haplotypes and Population Structure in Postearthquake Haiti, 2010.
Lindsay Carol Morton, Curtis Huber, Sheila Akinyi Okoth, Sean Griffing, Naomi Lucchi, Dragan Ljolje, Jacques Boncy, Roland Oscar, David Townes, Meredith McMorrow, Michelle A Chang, Venkatachalam Udhayakumar, and John W Barnwell
The American journal of tropical medicine and hygiene 2016 Jul
Genome-scale comparison of expanded gene families in Plasmodium ovale wallikeri and Plasmodium ovale curtisi with Plasmodium malariae and with other Plasmodium species.
Hifzur Rahman Ansari, Thomas J Templeton, Amit Kumar Subudhi, Abhinay Ramaprasad, Jianxia Tang, Feng Lu, Raeece Naeem, Yasmeen Hashish, Mary C Oguike, Ernest Diez Benavente, Taane G Clark, Colin J Sutherland, John W Barnwell, Richard Culleton, Jun Cao, and Arnab Pain
International journal for parasitology 2016 46(11) 685-96
Advanced Molecular Detection of Malarone Resistance.
Eldin Talundzic, Mateusz M Plucinski, Shweta Biliya, Luciana M Silva-Flannery, Paul M Arguin, Eric S Halsey, John W Barnwell, Fredrik Vannberg, and Venkatachalam Udhayakumar
Antimicrobial agents and chemotherapy 2016 60(6) 3821-3
Characterizing the genetic diversity of the monkey malaria parasite Plasmodium cynomolgi.
Patrick L Sutton, Zunping Luo, Paul C S Divis, Volney K Friedrich, David J Conway, Balbir Singh, John W Barnwell, Jane M Carlton, and Steven A Sullivan
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2016 Mar
Immunogenicity of a chimeric Plasmodium falciparum merozoite surface protein vaccine in Aotus monkeys.
James M Burns, Kazutoyo Miura, JoAnn Sullivan, Carole A Long, and John W Barnwell
Malaria journal 2016 15(1) 159
Independent Emergence of the Plasmodium Falciparum Kelch Propeller Domain Mutant Allele C580Y in Guyana.
Stella M Chenet, Sheila Akinyi Okoth, Curtis S Huber, Javin Chandrabose, Naomi W Lucchi, Eldin Talundzic, Karanchand Krishnalall, Nicolas Ceron, Lise Musset, Alexandre Macedo de Oliveira, Meera Venkatesan, Reyaud Rahman, John W Barnwell, and Venkatachalam Udhayakumar
The Journal of infectious diseases 2015 Dec
Healthcare-Associated Transmission of Plasmodium falciparum in New York City.
Ellen H Lee, Eleanor H Adams, Susan Madison-Antenucci, Lillian Lee, John W Barnwell, Joan Whitehouse, Ernest Clement, Waheed Bajwa, Lucretia E Jones, Emily Lutterloh, Don Weiss, and Joel Ackelsberg
Infection control and hospital epidemiology 2015 Oct 1-3
In vitro and molecular surveillance for antimalarial drug resistance in Plasmodium falciparum parasites in western Kenya reveals sustained artemisinin sensitivity and increased chloroquine sensitivity.
Naomi W Lucchi, Franklin Komino, Sheila Akinyi Okoth, Ira Goldman, Philip Onyona, Ryan E Wiegand, Elizabeth Juma, Ya Ping Shi, John W Barnwell, Venkatachalam Udhayakumar, and Simon Kariuki
Antimicrob. Agents Chemother. 2015 Sep 21.
Genetic Analysis and Species Specific Amplification of the Artemisinin Resistance-Associated Kelch Propeller Domain in P. falciparum and P. vivax.
Eldin Talundzic, Stella M Chenet, Ira F Goldman, Dhruviben S Patel, Julia A Nelson, Mateusz M Plucinski, John W Barnwell, and Venkatachalam Udhayakumar
PloS one 2015 (8) e0136099
Deletion of Plasmodium falciparum Histidine-Rich Protein 2 (pfhrp2) and Histidine-Rich Protein 3 (pfhrp3) Genes in Colombian Parasites.
Claribel Murillo Solano, Sheila Akinyi Okoth, Joseph F Abdallah, Zuleima Pava, Erika Dorado, Sandra Incardona, Curtis S Huber, Alexandre Macedo de Oliveira, David Bell, Venkatachalam Udhayakumar, and John W Barnwell
PLoS ONE 2015 (7) e0131576
Variation in Plasmodium falciparum Histidine-Rich Protein 2 (Pfhrp2) and Plasmodium falciparum Histidine-Rich Protein 3 (Pfhrp3) Gene Deletions in Guyana and Suriname.
Sheila Akinyi Okoth, Joseph F Abdallah, Nicolas Ceron, Malti R Adhin, Javin Chandrabose, Karanchand Krishnalall, Curtis S Huber, Ira F Goldman, Alexandre Macedo de Oliveira, John W Barnwell, and Venkatachalam Udhayakumar
PloS one 2015 (5) e0126805
Increasing Prevalence of a Novel Triple-Mutant Dihydropteroate Synthase Genotype in Plasmodium falciparum in Western Kenya.
Naomi W Lucchi, Sheila Akinyi Okoth, Franklin Komino, Philip Onyona, Ira F Goldman, Dragan Ljolje, Ya Ping Shi, John W Barnwell, Venkatachalam Udhayakumar, and Simon Kariuki
Antimicrob. Agents Chemother. 2015 Jul 59(7) 3995-4002
Selection and spread of artemisinin-resistant alleles in Thailand prior to the global artemisinin resistance containment campaign.
Eldin Talundzic, Sheila Akinyi Okoth, Kanungnit Congpuong, Mateusz M Plucinski, Lindsay Morton, Ira F Goldman, Patrick S Kachur, Chansuda Wongsrichanalai, Wichai Satimai, John W Barnwell, and Venkatachalam Udhayakumar
PLoS Pathog. 2015 Apr 11(4) e1004789
Comparative analysis of field-isolate and monkey-adapted Plasmodium vivax genomes.
Ernest R Chan, John W Barnwell, Peter A Zimmerman, and David Serre
PLoS Negl Trop Dis 2015 Mar 9(3) e0003566
Novel Mutation in Cytochrome B of Plasmodium falciparum in One of Two Atovaquone-Proguanil Treatment Failures in Travelers Returning From Same Site in Nigeria.
Mateusz M Plucinski, Curtis S Huber, Sheila Akinyi, Willard Dalton, Mary Eschete, Katharine Grady, Luciana Silva-Flannery, Blaine A Mathison, Venkatachalam Udhayakumar, Paul M Arguin, and John W Barnwell
Open forum infectious diseases 2014 Sep 1(2) ofu059
Prevalence of pfhrp2 and pfhrp3 gene deletions in Puerto Lempira, Honduras.
Joseph F Abdallah, Sheila Akinyi Okoth, Gustavo A Fontecha, Rosa Elena Mejia Torres, Engels I Banegas, María Luisa Matute, Sandra Tamara Mancero Bucheli, Ira F Goldman, Alexandre Macedo de Oliveira, John W Barnwell, and Venkatachalam Udhayakumar
Malar. J. 2015 1419
PET-PCR method for the molecular detection of malaria parasites in a national malaria surveillance study in Haiti, 2011.
Naomi W Lucchi, Mara A Karell, Ito Journel, Eric Rogier, Ira Goldman, Dragan Ljolje, Curtis Huber, Kimberly E Mace, Samuel E Jean, Eniko E Akom, Roland Oscar, Josiane Buteau, Jacques Boncy, John W Barnwell, and Venkatachalam Udhayakumar
Malaria journal 2014 Nov 13462
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