CDC-Authored Genomics and Precision Health Publications Database
Last data update: May 30, 2023. (Total: 4302 publications since 2011)
| Query Trace: all>>Daniel C Payne[CDC Author] |
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| Evaluation of Correctional Facility COVID-19 Outbreaks With Layered Mitigation Strategies Including Vaccination: Colorado, 2020-2021.
Martinez HE , Marshall KE , Showell VW , Tate JE , Kirking HL , Broudy M , Matzinger SR , Burakoff A , Deng L , Payne DC , Fleming-Dutra K , Jervis RH . J Correct Health Care 2023 
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| Increased Multidrug-Resistant Salmonella enterica I Serotype 4,[5],12:i:- Infections Associated with Pork, United States, 2009-2018.
Plumb ID , Brown AC , Stokes EK , Chen JC , Carleton H , Tolar B , Sundararaman P , Saupe A , Payne DC , Shah HJ , Folster JP , Friedman CR . Emerg Infect Dis 2023 29 (2) 314-22 |
| Gut Microbiome Composition and Metabolic Capacity Differ by FUT2 Secretor Status in Exclusively Breastfed Infants.
Thorman AW , Adkins G , Conrey SC , Burrell AR , Yu Y , White B , Burke R , Haslam D , Payne DC , Staat MA , Morrow AL , Newburg DS . Nutrients 2023 15 (2) |
| Changing Diagnostic Testing Practices for Foodborne Pathogens, Foodborne Diseases Active Surveillance Network, 2012-2019.
Ray LC , Griffin PM , Wymore K , Wilson E , Hurd S , LaClair B , Wozny S , Eikmeier D , Nicholson C , Burzlaff K , Hatch J , Fankhauser M , Kubota K , Huang JY , Geissler A , Payne DC , Tack DM . Open Forum Infect Dis 2022 9 (8) ofac344 |
| Understanding Variation in Rotavirus Vaccine Effectiveness Estimates in the United States: The Role of Rotavirus Activity and Diagnostic Misclassification.
Amin AB , Lash TL , Tate JE , Waller LA , Wikswo ME , Parashar UD , Stewart LS , Chappell JD , Halasa NB , Williams JV , Michaels MG , Hickey RW , Klein EJ , Englund JA , Weinberg GA , Szilagyi PG , Staat MA , McNeal MM , Boom JA , Sahni LC , Selvaragan R , Harrison CJ , Moffatt ME , Schuster JE , Pahud BA , Weddle GM , Azimi PH , Johnston SH , Payne DC , Bowen MD , Lopman BA . Epidemiology 2022 33 (5) 660-668 |
| Comparative genomic analysis of genogroup 1 and genogroup 2 rotaviruses circulating in seven US cities, 2014-2016.
Esona MD , Gautam R , Katz E , Jaime J , Ward ML , Wikswo ME , Betrapally NS , Rustempasic SM , Selvarangan R , Harrison CJ , Boom JA , Englund J , Klein EJ , Staat MA , McNeal MM , Halasa N , Chappell J , Weinberg GA , Payne DC , Parashar UD , Bowen MD . Virus Evol 2021 7 (1) veab023 |
| Detection and Clinical Implications of Monovalent Rotavirus Vaccine-Derived Virus Strains in Children with Gastroenteritis in Alberta, Canada.
Zhuo R , Tarr G , Xie J , Freedman SB , Payne DC , Lee BE , McWilliams C , Chui L , Ali S , Pang X . J Clin Microbiol 2021 59 (11) Jcm0115421 |
| Rotavirus Genotype Trends and Gastrointestinal Pathogen Detection in the United States, 2014-16: Results from the New Vaccine Surveillance Network.
Esona MD , Ward ML , Wikswo ME , Rustempasic SM , Gautam R , Perkins C , Selvarangan R , Harrison CJ , Boom JA , Englund JA , Klein EJ , Staat MA , McNeal MM , Halasa N , Chappell J , Weinberg GA , Payne DC , Parashar UD , Bowen MD . J Infect Dis 2021 224 (9) 1539-1549 |
| Pediatric Respiratory and Enteric Virus Acquisition and Immunogenesis in US Mothers and Children Aged 0-2: PREVAIL Cohort Study.
Morrow AL , Staat MA , DeFranco EA , McNeal MM , Cline AR , Conrey SC , Schlaudecker EP , Piasecki AM , Burke RM , Niu L , Hall AJ , Bowen MD , Gerber SI , Langley GE , Thornburg NJ , Campbell AP , Vinj J , Parashar UD , Payne DC . JMIR Res Protoc 2021 10 (2) e22222 |
| Temporal and Genotypic Associations of Sporadic Norovirus Gastroenteritis and Reported Norovirus Outbreaks in Middle Tennessee, 2012-2016.
Parikh MP , Vandekar S , Moore C , Thomas L , Britt N , Piya B , Stewart LS , Batarseh E , Hamdan L , Cavallo SJ , Swing AM , Garman KN , Constantine-Renna L , Chappell J , Payne DC , Vinje J , Hall AJ , Dunn JR , Halasa N . Clin Infect Dis 2019 71 (9) 2398-2404 |
| Multiple introductions and antigenic mismatch with vaccines may contribute to increased predominance of G12P[8] rotaviruses in the United States.
Ogden KM , Tan Y , Akopov A , Stewart LS , McHenry R , Fonnesbeck CJ , Piya B , Carter MH , Fedorova NB , Halpin RA , Shilts MH , Edwards KM , Payne DC , Esona MD , Mijatovic-Rustempasic S , Chappell JD , Patton JT , Halasa NB , Das SR . J Virol 2018 93 (1) |
| Multihospital Outbreak of a Middle East Respiratory Syndrome Coronavirus Deletion Variant, Jordan: A Molecular, Serologic, and Epidemiologic Investigation.
Payne DC , Biggs HM , Al-Abdallat MM , Alqasrawi S , Lu X , Abedi GR , Haddadin A , Iblan I , Alsanouri T , AlNsour M , SheikhAli S , Rha B , Trivedi SU , Rasheed MAU , Tamin A , Lamers MM , Haagmans BL , Erdman DD , Thornburg NJ , Gerber SI . Open Forum Infect Dis 2018 5 (5) ofy095 |
| Diarrheagenic Escherichia Coli and Acute Gastroenteritis in Children in Davidson County, Tennessee, United States: A Case-Control Study.
Imdad A , Foster MA , Iqbal J , Fonnesbeck C , Payne DC , Zhang C , Chappell JD , Halasa N , Gomez-Duarte OG . Pediatr Infect Dis J 2018 37 (6) 543-548 |
| Comparison of three multiplex gastrointestinal platforms for the detection of gastroenteritis viruses.
Chhabra Preeti, Gregoricus Nicole, Weinberg Geoffrey A, Halasa Natasha, Chappell James, Hassan Ferdaus, Selvarangan Rangaraj, Mijatovic-Rustempasic Slavica, Ward M Leanne, Bowen Michael, Payne Daniel C, Vinjé Jan. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2017 Sep 9566-71 . Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2017 Oct 66-71 |
| Using Multiplex Molecular Testing to Determine the Etiology of Acute Gastroenteritis in Children.
Nicholson Maribeth R, Van Horn Gerald T, Tang Yi-Wei, Vinjé Jan, Payne Daniel C, Edwards Kathryn M, Chappell James D.The Journal of pediatrics 2016 Jun . The Journal of pediatrics 2016 Jun |
| Rotavirus Strain Trends During the Postlicensure Vaccine Era: United States, 2008-2013.
Bowen Michael D, Mijatovic-Rustempasic Slavica, Esona Mathew D, Teel Elizabeth N, Gautam Rashi, Sturgeon Michele, Azimi Parvin H, Baker Carol J, Bernstein David I, Boom Julie A, Chappell James, Donauer Stephanie, Edwards Kathryn M, Englund Janet A, Halasa Natasha B, Harrison Christopher J, Johnston Samantha H, Klein Eileen J, McNeal Monica M, Moffatt Mary E, Rench Marcia A, Sahni Leila C, Selvarangan Rangaraj, Staat Mary A, Szilagyi Peter G, Weinberg Geoffrey A, Wikswo Mary E, Parashar Umesh D, Payne Daniel C. The Journal of infectious diseases 2016 Sep 214(5) 732-8 . The Journal of infectious diseases 2016 Sep 214(5) 732-8 |
| Molecular characterization of the first G24P[14] rotavirus strain detected in humans.
Ward M Leanne, Mijatovic-Rustempasic Slavica, Roy Sunando, Rungsrisuriyachai Kunchala, Boom Julie A, Sahni Leila C, Baker Carol J, Rench Marcia A, Wikswo Mary E, Payne Daniel C, Parashar Umesh D, Bowen Michael D.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2016 May . Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2016 May |
| Full genome characterization of the first G3P[24] rotavirus strain detected in humans provides evidence of interspecies reassortment and mutational saturation in the VP7 gene.
Mijatovic-Rustempasic Slavica, Roy Sunando, Teel Elizabeth N, Weinberg Geoffrey A, Payne Daniel C, Parashar Umesh D, Bowen Michael D. The Journal of general virology 2016 Feb 97(2) 389-402 . The Journal of general virology 2016 Feb 97(2) 389-402 |
| Host Genetic Susceptibility to Enteric Viruses: A Systematic Review and Metaanalysis.
Kambhampati Anita, Payne Daniel C, Costantini Veronica, Lopman Benjamin A.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2015 Oct . Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2015 Oct |
| G2P[4]-RotaTeq Reassortant Rotavirus in Vaccinated Child, United States.
Roy Sunando, Rungsrisuriyachai Kunchala, Esona Mathew D, Boom Julie A, Sahni Leila C, Rench Marcia A, Baker Carol J, Wikswo Mary E, Payne Daniel C, Parashar Umesh D, Bowen Michael D. Emerging infectious diseases 2015 Nov 21(11) 2103-4 . Emerging infectious diseases 2015 Nov 21(11) 2103-4 |
| Epidemiologic Association Between FUT2 Secretor Status and Severe Rotavirus Gastroenteritis in Children in the United States.
Payne Daniel C, Currier Rebecca L, Staat Mary A, Sahni Leila C, Selvarangan Rangaraj, Halasa Natasha B, Englund Janet A, Weinberg Geoffrey A, Boom Julie A, Szilagyi Peter G, Klein Eileen J, Chappell James, Harrison Christopher J, Davidson Barbara S, Mijatovic-Rustempasic Slavica, Moffatt Mary D, McNeal Monica, Wikswo Mary, Bowen Michael D, Morrow Ardythe L, Parashar Umesh D. JAMA pediatrics 2015 Sep 1-6 . JAMA pediatrics 2015 Nov (11) 1040-5 |
| Enteropathogenic and enteroaggregative E. coli in stools of children with acute gastroenteritis in Davidson County, Tennessee.
Foster Monique A, Iqbal Junaid, Zhang Chengxian, McHenry Rendie, Cleveland Brent E, Romero-Herazo Yesenia, Fonnesbeck Chris, Payne Daniel C, Chappell James D, Halasa Natasha, Gómez-Duarte Oscar G. Diagnostic microbiology and infectious disease 2015 Nov 83(3) 319-24 . Diagnostic microbiology and infectious disease 2015 Nov 83(3) 319-24 |
| Innate susceptibility to norovirus infections influenced by FUT2 genotype in a United States pediatric population.
Currier Rebecca L, Payne Daniel C, Staat Mary A, Selvarangan Rangaraj, Shirley S Hannah, Halasa Natasha, Boom Julie A, Englund Janet A, Szilagyi Peter G, Harrison Christopher J, Klein Eileen J, Weinberg Geoffrey A, Wikswo Mary E, Parashar Umesh, Vinjé Jan, Morrow Ardythe L.Clin. Infect. Dis. 2015 Mar 5. . Clin. Infect. Dis. 2015 Mar 5. |
| Comparative genomic analysis of genogroup 1 (Wa-like) rotaviruses circulating in the USA, 2006-2009.
Roy Sunando, Esona Mathew D, Kirkness Ewen F, Akopov Asmik, McAllen J Kyle, Wikswo Mary E, Cortese Margaret M, Payne Daniel C, Parashar Umesh D, Gentsch Jon R, Bowen Michael D, , . Infect. Genet. Evol. 2014 Dec 28513-23 . Infect. Genet. Evol. 2014 Dec 28513-23 |
| Molecular epidemiology of contemporary G2P[4] human rotaviruses cocirculating in a single U.S. community: footprints of a globally transitioning genotype.
Dennis Allison F, McDonald Sarah M, Payne Daniel C, Mijatovic-Rustempasic Slavica, Esona Mathew D, Edwards Kathryn M, Chappell James D, Patton John T. J. Virol. 2014 Apr 88(7) 3789-801 . J. Virol. 2014 Apr 88(7) 3789-801 |
| Genetic analysis of G12P[8] rotaviruses detected in the largest U.S. G12 genotype outbreak on record.
Mijatovic-Rustempasic Slavica, Teel Elizabeth N, Kerin Tara K, Hull Jennifer J, Roy Sunando, Weinberg Geoffrey A, Payne Daniel C, Parashar Umesh D, Gentsch Jon R, Bowen Michael D. Infect. Genet. Evol. 2014 Jan 21214-9 . Infect. Genet. Evol. 2014 Jan 21214-9 |
| Diversity and relationships of cocirculating modern human rotaviruses revealed using large-scale comparative genomics.
McDonald Sarah M, McKell Allison O, Rippinger Christine M, McAllen John K, Akopov Asmik, Kirkness Ewen F, Payne Daniel C, Edwards Kathryn M, Chappell James D, Patton John T. J. Virol. 2012 Sep 86(17) 9148-62 . J. Virol. 2012 Sep 86(17) 9148-62 |
| First reports of human rotavirus G8P[4] gastroenteritis in the United States.
Weinberg Geoffrey A, Payne Daniel C, Teel Elizabeth N, Mijatovic-Rustempasic Slavica, Bowen Michael D, Wikswo Mary, Gentsch Jon R, Parashar Umesh D. J. Clin. Microbiol. 2012 Mar 50(3) 1118-21 . J. Clin. Microbiol. 2012 Mar 50(3) 1118-21 |
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- Page last updated:May 30, 2023
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