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Public Health Genomics and Precision Health Knowledge Base (v9.0)
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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)
CDC-Authored Genomics and Precision Health Publications Database
Last data update: Apr 22, 2024
. (Total: 5836 publications)
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Records 1-30 (of 35 Records)
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all>>Yu Li[CDC Author]
Fatal Human Rabies Infection with Suspected Host-mediated Failure of Post-Exposure Prophylaxis Following a Recognized Zoonotic Exposure-Minnesota, 2021.
Holzbauer SM
,
Schrodt CA
,
Prabhu RM , Asch-Kendrick RJ , Ireland M , Klumb C , Firestone MJ , Liu G , Harry K ,
Ritter JM
,
Levine MZ
,
Orciari LA
,
Wilkins K
,
Yager P
,
Gigante CM
,
Ellison JA
,
Zhao H
,
Niezgoda M
,
Li Y , Levis R , Scott D ,
Satheshkumar PS
,
Petersen BW
,
Rao AK
,
Bell WR , Bjerk SM , Forrest S , Gao W , Dasheiff R , Russell K , Pappas M , Kiefer J , Bickler W , Wiseman A , Jurantee J , Reichard RR , Smith KE , Lynfield R , Scheftel J ,
Wallace RM
,
Bonwitt J
.
Clin Infect Dis 2023 77 (8) 1201-1208
Multiple lineages of monkeypox virus detected in the United States, 2021-2022.
Gigante CM
,
Korber B ,
Seabolt MH
,
Wilkins K
,
Davidson W
,
Rao AK
,
Zhao H
,
Smith TG
,
Hughes CM
,
Minhaj F
,
Waltenburg MA
,
Theiler J , Smole S , Gallagher GR , Blythe D , Myers R , Schulte J , Stringer J , Lee P , Mendoza RM , Griffin-Thomas LA , Crain J , Murray J , Atkinson A , Gonzalez AH , Nash J ,
Batra D
,
Damon I
,
McQuiston J
,
Hutson CL
,
McCollum AM
,
Li Y
.
Science 2022 378 (6619) eadd4153
Detection of Apparent Early Rabies Infection by LN34 Pan-Lyssavirus Real-Time RT-PCR Assay in Pennsylvania.
Dettinger L ,
Gigante CM
,
Sellard M , Seiders M , Patel P ,
Orciari LA
,
Yager P
,
Lute J , Regec A ,
Li Y
,
Xia D .
Viruses 2022 14 (9)
Divergent Rabies Virus Variant of Probable Bat Origin in 2 Gray Foxes, New Mexico, USA.
Condori Rene E, Aragon Adam, Breckenridge Mike, Pesko Kendra, Mower Kerry, Ettestad Paul, Melman Sandra, Velasco-Villa Andres, Orciari Lillian A, Yager Pamela, Streicker Daniel G, Gigante Crystal M, Morgan Clint, Wallace Ryan, Li Yu. Emerging infectious diseases 2022 28(6) 1137-1145 .
Emerging infectious diseases 2022 28(6) 1137-1145
Monkeypox in a Traveler Returning from Nigeria - Dallas, Texas, July 2021.
Rao AK
,
Schulte J ,
Chen TH
,
Hughes CM
,
Davidson W
,
Neff JM , Markarian M ,
Delea KC
,
Wada S , Liddell A , Alexander S ,
Sunshine B
,
Huang P , Honza HT ,
Rey A
,
Monroe B
,
Doty J
,
Christensen B
,
Delaney L
,
Massey J ,
Waltenburg M
,
Schrodt CA
,
Kuhar D
,
Satheshkumar PS
,
Kondas A
,
Li Y
,
Wilkins K
,
Sage KM ,
Yu Y
,
Yu P
,
Feldpausch A ,
McQuiston J
,
Damon IK
,
McCollum AM
.
MMWR Morb Mortal Wkly Rep 2022 71 (14) 509-516
Geographic distribution and genetic characterization of poxviruses from human infections in Georgia, 2009-2014.
Khmaladze E ,
Mauldin MR
,
Tsaguria D , Gavashelidze M , Sidamonidze K , Tevdoradze T ,
Li Y
,
Reynolds MG
,
Imnadze P ,
Nakazawa Y
.
Arch Virol 2021 166 (6) 1729-1733
Evaluation of Two Real-Time, TaqMan Reverse Transcription-PCR Assays for Detection of Rabies Virus in Circulating Variants from Argentina: Influence of Sequence Variation.
Caraballo DA , Lombardo MA , Becker P , Sabio MS , Lema C , Martínez LM , Beltrán FJ ,
Li Y
,
Cisterna DM .
Viruses 2020 13 (1)
Portable Rabies Virus Sequencing in Canine Rabies Endemic Countries Using the Oxford Nanopore MinION.
Gigante CM
,
Yale G ,
Condori RE
,
Costa NC , Long NV , Minh PQ , Chuong VD , Tho ND , Thanh NT , Thin NX , Hanh NTH , Wambura G , Ade F , Mito O , Chuchu V , Muturi M , Mwatondo A , Hampson K , Thumbi SM , Thomae BG , de Paz VH , Meneses S ,
Munyua P
,
Moran D ,
Cadena L
,
Gibson A ,
Wallace RM
,
Pieracci EG
,
Li Y
.
Viruses 2020 12 (11)
Exportation of Monkeypox virus from the African continent.
Mauldin MR
,
McCollum AM
,
Nakazawa YJ
,
Mandra A
,
Whitehouse ER
,
Davidson W
,
Zhao H
,
Gao J
,
Li Y
,
Doty J
,
Yinka-Ogunleye A , Akinpelu A , Aruna O , Naidoo D , Lewandowski K , Afrough B , Graham V , Aarons E , Hewson R , Vipond R , Dunning J , Chand M , Brown C , Cohen-Gihon I , Erez N , Shifman O , Israeli O , Sharon M , Schwartz E , Beth-Din A , Zvi A , Mak TM , Ng YK , Cui L , Lin RTP ,
Olson VA
,
Brooks T , Paran N , Ihekweazu C ,
Reynolds MG
.
J Infect Dis 2020 225 (8) 1367-1376
The origins and genomic diversity of American Civil War Era smallpox vaccine strains.
Duggan AT , Klunk J , Porter AF , Dhody AN , Hicks R , Smith GL , Humphreys M ,
McCollum AM
,
Davidson WB
,
Wilkins K
,
Li Y
,
Burke A , Polasky H , Flanders L , Poinar D , Raphenya AR , Lau TTY , Alcock B , McArthur AG , Golding GB , Holmes EC , Poinar HN .
Genome Biol 2020 21 (1) 175
Using the LN34 Pan-Lyssavirus Real-Time RT-PCR Assay for Rabies Diagnosis and Rapid Genetic Typing from Formalin-Fixed Human Brain Tissue.
Condori RE
,
Niezgoda M
,
Lopez G , Matos CA , Mateo ED ,
Gigante C
,
Hartloge C
,
Filpo AP , Haim J ,
Satheshkumar PS
,
Petersen B
,
Wallace R
,
Olson V
,
Li Y
.
Viruses 2020 12 (1)
Isolation and characterization of Akhmeta virus from wild caught rodents ( Apodemus spp.) in Georgia.
Doty JB
,
Maghlakelidze G
,
Sikharulidze I , Tu SL ,
Morgan CN
,
Mauldin MR
,
Parkadze O , Kartskhia N , Turmanidze M ,
Matheny A
,
Davidson W
,
Tang S
,
Gao J
,
Li Y
,
Upton C ,
Carroll DS
,
Emerson GL
,
Nakazawa Y
.
J Virol 2019 93 (24)
Genome of Alaskapox Virus, A Novel Orthopoxvirus Isolated from Alaska.
Gigante CM
,
Gao J
,
Tang S
,
McCollum AM
,
Wilkins K
,
Reynolds MG
,
Davidson W
,
McLaughlin J ,
Olson VA
,
Li Y
.
Viruses 2019 11 (8)
New Insights into the Evolutionary and Genomic Landscape of Molluscum Contagiosum Virus (MCV) based on Nine MCV1 and Six MCV2 Complete Genome Sequences.
Zorec TM , Kutnjak D , Hosnjak L , Kusar B , Trcko K , Kocjan BJ ,
Li Y
,
Krizmaric M , Miljkovic J , Ravnikar M , Poljak M .
Viruses 2018 10 (11)
Genome Sequences of Akhmeta Virus, an Early Divergent Old World Orthopoxvirus.
Gao J
,
Gigante C
,
Khmaladze E ,
Liu P
,
Tang S
,
Wilkins K
,
Zhao K
,
Davidson W
,
Nakazawa Y
,
Maghlakelidze G
,
Geleishvili M
,
Kokhreidze M ,
Carroll DS
,
Emerson G
,
Li Y
.
Viruses 2018 10 (5)
Multi-site evaluation of the LN34 pan-lyssavirus real-time RT-PCR assay for post-mortem rabies diagnostics.
Gigante CM
,
Dettinger L , Powell JW , Seiders M ,
Condori REC
,
Griesser R , Okogi K , Carlos M , Pesko K , Breckenridge M , Simon EMM , Chu Myjv , Davis AD , Brunt SJ ,
Orciari L
,
Yager P
,
Carson WC
,
Hartloge C
,
Saliki JT , Sanchez S , Deldari M , Hsieh K ,
Wadhwa A
,
Wilkins K
,
Peredo VY , Rabideau P , Gruhn N , Cadet R , Isloor S , Nath SS , Joseph T ,
Gao J
,
Wallace R
,
Reynolds M
,
Olson VA
,
Li Y
.
PLoS One 2018 13 (5) e0197074
Two novel poxviruses with unusual genome rearrangements: NY_014 and Murmansk.
Smithson C ,
Meyer H
,
Gigante CM
,
Gao J
,
Zhao H
,
Batra D
,
Damon I
,
Upton C ,
Li Y
.
Virus Genes 2017 53 (6) 883-897
Characterization of Eptesipoxvirus, a novel poxvirus from a microchiropteran bat.
Tu SL ,
Nakazawa Y
,
Gao J
,
Wilkins K
,
Gallardo-Romero N
,
Li Y
,
Emerson GL
,
Carroll DS
,
Upton C .
Virus Genes 2017 53 (6) 856-867
Cowpox virus: What's in a Name?
Mauldin MR
,
Antwerpen M ,
Emerson GL
,
Li Y
,
Zoeller G
,
Carroll DS
,
Meyer H .
Viruses 2017 9 (5)
A Pan-Lyssavirus Taqman Real-Time RT-PCR Assay for the Detection of Highly Variable Rabies virus and Other Lyssaviruses.
Wadhwa A
,
Wilkins K
,
Gao J
,
Condori Condori RE
,
Gigante CM
,
Zhao H
,
Ma X
,
Ellison JA
,
Greenberg L
,
Velasco-Villa A
,
Orciari L
,
Li Y
.
PLoS Negl Trop Dis 2017 11 (1) e0005258
Serro 2 Virus Highlights the Fundamental Genomic and Biological Features of a Natural Vaccinia Virus Infecting Humans.
Trindade GS
,
Emerson GL
,
Sammons S
,
Frace M
,
Govil D
,
Fernandes Mota BE , Abrahao JS , de Assis FL ,
Olsen-Rasmussen M
,
Goldsmith CS
,
Li Y
,
Carroll D
,
Guimaraes da Fonseca F , Kroon E ,
Damon IK
.
Viruses 2016 8 (12)
Evaluation of the GeneXpert for Human Monkeypox Diagnosis.
Li D
,
Wilkins K
,
McCollum AM
,
Osadebe L
,
Kabamba J , Nguete B , Likafi T , Balilo MP , Lushima RS , Malekani J ,
Damon IK
,
Vickery MC , Pukuta E , Nkawa F , Karhemere S , Tamfum JM , Okitolonda EW ,
Li Y
,
Reynolds MG
.
Am J Trop Med Hyg 2016 96 (2) 405-410
The genomes of three North American orthopoxviruses.
Smithson C , Tang N ,
Sammons S
,
Frace M
,
Batra D
,
Li Y
,
Emerson GL
,
Carroll DS
,
Upton C .
Virus Genes 2016 53 (1) 21-34
Finishing monkeypox genomes from short reads: assembly analysis and a neural network method.
Zhao K
,
Wohlhueter RM ,
Li Y
.
BMC Genomics 2016 17 Suppl 5 497
Unique Presentation of Orf Virus Infection in a Thermal Burn Patient After Receiving an Autologous Skin Graft.
Hsu CH
,
Rokni GR , Aghazadeh N , Brinster N ,
Li Y
,
Muehlenbachs A
,
Goldsmith CS
,
Zhao H
,
Petersen B
,
McCollum AM
,
Reynolds MG
.
J Infect Dis 2016 214 (8) 1171-4
Genome Sequence of Vaccinia virus Strain Lister-Butantan, a Lister Vaccine Variant Used during a Smallpox Eradication Campaign in Brazil.
Assis F , Trindade G , Drumond B ,
Frace M
,
Sammons S
,
Emerson G
,
Li Y
,
Carroll D
,
Batra D
,
Abrahao J , Kroon E .
Genome Announc 2016 4 (3)
Genomic analysis, phenotype, and virulence of the historical Brazilian smallpox vaccine strain IOC: Implications for the origins and evolutionary relationships of vaccinia virus.
Medaglia ML , Moussatche N , Nitsche A , Dabrowski PW ,
Li Y
,
Damon IK
,
Lucas CG , Arruda LB , Damaso CR .
J Virol 2015 89 (23) 11909-25
Novel Poxvirus Infection in an Immune Suppressed Patient.
Lakis NS ,
Li Y
,
Abraham JL , Upton C , Blair DC ,
Smith S
,
Zhao H
,
Damon IK
.
Clin Infect Dis 2015 61 (10) 1543-8
A phylogeographic investigation of African monkeypox.
Nakazawa Y
,
Mauldin MR
,
Emerson GL
,
Reynolds MG
,
Lash RR
,
Gao J
,
Zhao H
,
Li Y
,
Muyembe JJ , Kingebeni PM , Wemakoy O , Malekani J ,
Karem KL
,
Damon IK
,
Carroll DS
.
Viruses 2015 7 (4) 2168-84
Human infection with a zoonotic orthopoxvirus in the country of Georgia.
Vora NM
,
Li Y
,
Geleishvili M
,
Emerson GL
,
Khmaladze E , Maghlakelidze G , Navdarashvili A , Zakhashvili K , Kokhreidze M , Endeladze M , Mokverashvili G ,
Satheshkumar PS
,
Gallardo-Romero N
,
Goldsmith CS
,
Metcalfe MG
,
Damon I
,
Maes EF
,
Reynolds MG
,
Morgan J
,
Carroll DS
.
N Engl J Med 2015 372 (13) 1223-30
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Page last reviewed:
Feb 1, 2024
Page last updated:
Apr 22, 2024
Content source:
Public Health Genomics Branch in the Division of Blood Disorders and Public Health Genomics
,
National Center on Birth Defects and Developmental Disabilities
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