Skip directly to search Skip directly to A to Z list Skip directly to navigation Skip directly to page options Skip directly to site content

CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Aug 15, 2025. (Total: 6773 publications)
   dataset
Filtered By:
Next
Records 1-30 (of 37 Records)
Query Trace: Yuan K[original query]
SARS-CoV-2 dynamics in New York City during March 2020-August 2023
Yang W , Parton H , Li W , Watts EA , Lee E , Yuan H .
Commun Med (Lond) 2025 5 (1) 102 type
Advancing ethical considerations for data science in injury and violence prevention
Idaikkadar N , Bodin E , Cholli P , Navon L , Ortmann L , Banja J , Waller LA , Alic A , Yuan K , Law R .
Public Health Rep 2025 333549241312055
Coordinated evolution among hepatitis C virus genomic sites is coupled to host factors and resistance to interferon.
Lara J , Tavis JE , Donlin MJ , Lee WM , Yuan HJ , Pearlman BL , Vaughan G , Forbi JC , Xia GL , Khudyakov YE .
In Silico Biol 2011 11 213-24
Large-scale validation of skin prion seeding activity as a biomarker for diagnosis of prion diseases
Zhang W , Orrú CD , Foutz A , Ding M , Yuan J , Shah SZA , Zhang J , Kotobelli K , Gerasimenko M , Gilliland T , Chen W , Tang M , Cohen M , Safar J , Xu B , Hong DJ , Cui L , Hughson AG , Schonberger LB , Tatsuoka C , Chen SG , Greenlee JJ , Wang Z , Appleby BS , Caughey B , Zou WQ .
Acta Neuropathol 2024 147 (1) 17 type
Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)
Kuhn JH , Abe J , Adkins S , Alkhovsky SV , Avšič-Županc T , Ayllón MA , Bahl J , Balkema-Buschmann A , Ballinger MJ , Kumar Baranwal V , Beer M , Bejerman N , Bergeron É , Biedenkopf N , Blair CD , Blasdell KR , Blouin AG , Bradfute SB , Briese T , Brown PA , Buchholz UJ , Buchmeier MJ , Bukreyev A , Burt F , Büttner C , Calisher CH , Cao M , Casas I , Chandran K , Charrel RN , Kumar Chaturvedi K , Chooi KM , Crane A , Dal Bó E , Carlos de la Torre J , de Souza WM , de Swart RL , Debat H , Dheilly NM , Di Paola N , Di Serio F , Dietzgen RG , Digiaro M , Drexler JF , Duprex WP , Dürrwald R , Easton AJ , Elbeaino T , Ergünay K , Feng G , Firth AE , Fooks AR , Formenty PBH , Freitas-Astúa J , Gago-Zachert S , Laura García M , García-Sastre A , Garrison AR , Gaskin TR , Gong W , Gonzalez JJ , de Bellocq J , Griffiths A , Groschup MH , Günther I , Günther S , Hammond J , Hasegawa Y , Hayashi K , Hepojoki J , Higgins CM , Hongō S , Horie M , Hughes HR , Hume AJ , Hyndman TH , Ikeda K , Jiāng D , Jonson GB , Junglen S , Klempa B , Klingström J , Kondō H , Koonin EV , Krupovic M , Kubota K , Kurath G , Laenen L , Lambert AJ , Lǐ J , Li JM , Liu R , Lukashevich IS , MacDiarmid RM , Maes P , Marklewitz M , Marshall SH , Marzano SL , McCauley JW , Mirazimi A , Mühlberger E , Nabeshima T , Naidu R , Natsuaki T , Navarro B , Navarro JA , Neriya Y , Netesov SV , Neumann G , Nowotny N , Nunes MRT , Ochoa-Corona FM , Okada T , Palacios G , Pallás V , Papa A , Paraskevopoulou S , Parrish CR , Pauvolid-Corrêa A , Pawęska JT , Pérez DR , Pfaff F , Plemper RK , Postler TS , Rabbidge LO , Radoshitzky SR , Ramos-González PL , Rehanek M , Resende RO , Reyes CA , Rodrigues TCS , Romanowski V , Rubbenstroth D , Rubino L , Runstadler JA , Sabanadzovic S , Sadiq S , Salvato MS , Sasaya T , Schwemmle M , Sharpe SR , Shi M , Shimomoto Y , Kavi Sidharthan V , Sironi M , Smither S , Song JW , Spann KM , Spengler JR , Stenglein MD , Takada A , Takeyama S , Tatara A , Tesh RB , Thornburg NJ , Tian X , Tischler ND , Tomitaka Y , Tomonaga K , Tordo N , Tu C , Turina M , Tzanetakis IE , Maria Vaira A , van den Hoogen B , Vanmechelen B , Vasilakis N , Verbeek M , von Bargen S , Wada J , Wahl V , Walker PJ , Waltzek TB , Whitfield AE , Wolf YI , Xia H , Xylogianni E , Yanagisawa H , Yano K , Ye G , Yuan Z , Zerbini FM , Zhang G , Zhang S , Zhang YZ , Zhao L , Økland AL .
J Gen Virol 2023 104 (8)
Molecular evolution and antigenic drift of type 3 iVDPVs excreted from a patient with immunodeficiency in Ningxia, China.
Fan Q , Ma J , Li X , Jorba J , Yuan F , Zhu H , Hu L , Song Y , Wang D , Zhu S , Yan D , Chen H , Xu W , Zhang Y .
J Med Virol 2023 95 (1) e28215
Efficient rescue of a newly classified Ebinur lake orthobunyavirus with GFP reporter and its application in rapid antiviral screening.
Ren N , Wang F , Zhao L , Wang S , Zhang G , Li J , Zhang B , Wang J , Bergeron E , Yuan Z , Xia H .
Antiviral Res 2022 207 105421
PgtE Enzyme of Salmonella enterica Shares the Similar Biological Roles to Plasminogen Activator (Pla) in Interacting With DEC-205 (CD205), and Enhancing Host Dissemination and Infectivity by Yersinia pestis.
Li Q , Ye C , Zhao F , Li W , Zhu S , Lv Y , Park CG , Zhang Y , Jiang LY , Yang K , He Y , Cai H , Zhang S , Ding HH , Njiri OA , Tembo JM , Alkraiem AA , Li AY , Sun ZY , Li W , Yan MY , Kan B , Huo X , Klena JD , Skurnik M , Anisimov AP , Gao X , Han Y , Yang RF , Xiamu X , Wang Y , Chen H , Chai B , Sun Y , Yuan J , Chen T .
Front Immunol 2022 13 791799
Benzene Derivatives from Ink Lead to False Positive Results in Neonatal Hyperphenylalaninemia Screening with Ninhydrin Fluorometric Method.
Feng Shuren, Mei Joanne, Yang Lu, Luo Ping, Wang Xiaonan, Wang Yuan, Yao Jingyi, Cui Lan, Pan Lei, Wang Zefang, Xin Li. International journal of neonatal screening 2020 Feb 6(1) .
International journal of neonatal screening 2020 Feb 6(1)
Invasive pneumococcal strain distributions and isolate clusters associated with persons experiencing homelessness during 2018.
Metcalf BJ , Chochua S , Walker H , Tran T , Li Z , Varghese J , Snippes Vagnone PM , Lynfield R , McGee L , Li Y , Pilishvili T , Beall B .
Clin Infect Dis 2020 72 (12) e948-e956 type
From People to Panthera : Natural SARS-CoV-2 Infection in Tigers and Lions at the Bronx Zoo.
McAloose D , Laverack M , Wang L , Killian ML , Caserta LC , Yuan F , Mitchell PK , Queen K , Mauldin MR , Cronk BD , Bartlett SL , Sykes JM , Zec S , Stokol T , Ingerman K , Delaney MA , Fredrickson R , Ivančić M , Jenkins-Moore M , Mozingo K , Franzen K , Bergeson NH , Goodman L , Wang H , Fang Y , Olmstead C , McCann C , Thomas P , Goodrich E , Elvinger F , Smith DC , Tong S , Slavinski S , Calle PP , Terio K , Torchetti MK , Diel DG .
mBio 2020 11 (5) type
Benzene Derivatives from Ink Lead to False Positive Results in Neonatal Hyperphenylalaninemia Screening with Ninhydrin Fluorometric Method.
Feng S , Mei J , Yang L , Luo P , Wang X , Wang Y , Yao J , Cui L , Pan L , Wang Z , Xin L .
Int J Neonatal Screen 2020 6 (1) 14
Upsurge of conjugate vaccine serotype 4 invasive pneumococcal disease clusters among adults experiencing homelessness in California, Colorado, and New Mexico.
Beall B , Walker H , Tran T , Li Z , Varghese J , McGee L , Li Y , Metcalf BJ , Gierke R , Mosites E , Chochua S , Pilishvili T .
J Infect Dis 2020 223 (7) 1241-1249 type
Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates.
Gladstone RA , Lo SW , Goater R , Yeats C , Taylor B , Hadfield J , Lees JA , Croucher NJ , van Tonder AJ , Bentley LJ , Quah FX , Blaschke AJ , Pershing NL , Byington CL , Balaji V , Hryniewicz W , Sigauque B , Ravikumar KL , Almeida SCG , Ochoa TJ , Ho PL , du Plessis M , Ndlangisa KM , Cornick JE , Kwambana-Adams B , Benisty R , Nzenze SA , Madhi SA , Hawkins PA , Pollard AJ , Everett DB , Antonio M , Dagan R , Klugman KP , von Gottberg A , Metcalf BJ , Li Y , Beall BW , McGee L , Breiman RF , Aanensen DM , Bentley SD .
Microb Genom 2020 6 (5) type
Landscape of gene expression variation of natural isolates of Cryptococcus neoformans in response to biologically relevant stresses.
Yu CH , Chen Y , Desjardins CA , Tenor JL , Toffaletti DL , Giamberardino C , Litvintseva A , Perfect JR , Cuomo CA .
Microb Genom 2019 6 (1)
A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa.
Lo SW , Gladstone RA , van Tonder AJ , Du Plessis M , Cornick JE , Hawkins PA , Madhi SA , Nzenze SA , Kandasamy R , Ravikumar KL , Elmdaghri N , Kwambana-Adams B , Almeida SCG , Skoczynska A , Egorova E , Titov L , Saha SK , Paragi M , Everett DB , Antonio M , Klugman KP , Li Y , Metcalf BJ , Beall B , McGee L , Breiman RF , Bentley SD , von Gottberg A .
J Antimicrob Chemother 2019 75 (3) 512-520
Multistate population and whole genome sequence based strain surveillance of invasive pneumococci recovered in the United States during 2017.
Varghese J , Chochua S , Tran T , Walker H , Li Z , Snippes Vagnone PM , Lynfield R , McGee L , Li Y , Metcalf B , Pilishvili T , Beall B .
Clin Microbiol Infect 2019 26 (4) 512 e1-512 e10 type
Emergent Invasive Group A Streptococcus dysgalactiae subsp. Equisimilis, United States, 2015-2018.
Chochua S , Rivers J , Mathis S , Li Z , Velusamy S , McGee L , Van Beneden C , Li Y , Metcalf BJ , Beall B .
Emerg Infect Dis 2019 25 (8) 1543-1547 type
Genome-wide association analyses of invasive pneumococcal isolates identify a missense bacterial mutation associated with meningitis.
Li Y , Metcalf BJ , Chochua S , Li Z , Walker H , Tran T , Hawkins PA , Gierke R , Pilishvili T , McGee L , Beall BW .
Nat Commun 2019 10 (1) 178 type
A Population-Based Descriptive Atlas of Invasive Pneumococcal Strains Recovered Within the U.S. During 2015-2016.
Beall B , Chochua S , Gertz RE Jr , Li Y , Li Z , McGee L , Metcalf BJ , Ricaldi J , Tran T , Walker H , Pilishvili T .
Front Microbiol 2018 9 2670
Outbreak of invasive infections from subtype emm26.3 group A Streptococcus among homeless adults-Anchorage, Alaska, 2016-2017.
Mosites E , Frick A , Gounder P , Castrodale L , Li Y , Rudolph K , Hurlburt D , Lecy KD , Zulz T , Adebanjo T , Onukwube J , Beall B , Van Beneden CA , Hennessy T , McLaughlin J , Bruce MG .
Clin Infect Dis 2018 66 (7) 1068-1074 type
Recommendations for Clinical CYP2C19 Genotyping Allele Selection: A Report of the Association for Molecular Pathology.
Pratt VM , Del Tredici AL , Hachad H , Ji Y , Kalman LV , Scott SA , Weck KE .
J Mol Diagn 2018 20 (3) 269-276
Evolutionary analysis of mumps viruses of genotype F collected in mainland China in 2001-2015.
Cui A , Rivailler P , Zhu Z , Deng X , Hu Y , Wang Y , Li F , Sun Z , He J , Si Y , Tian X , Zhou S , Lei Y , Zheng H , Rota PA , Xu W .
Sci Rep 2017 7 (1) 17144
Validation of ß-lactam minimum inhibitory concentration predictions for pneumococcal isolates with newly encountered penicillin binding protein (PBP) sequences.
Li Y , Metcalf BJ , Chochua S , Li Z , Gertz RE Jr , Walker H , Hawkins PA , Tran T , McGee L , Beall BW .
BMC Genomics 2017 18 (1) 621
Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans.
Desjardins CA , Giamberardino C , Sykes SM , Yu CH , Tenor JL , Chen Y , Yang T , Jones AM , Sun S , Haverkamp MR , Heitman J , Litvintseva AP , Perfect JR , Cuomo CA .
Genome Res 2017 27 (7) 1207-1219
Hepatitis E in Singapore: A Case-Series and Viral Phylodynamics Study.
Teo EC , Tan BH , Purdy MA , Wong PS , Ting PJ , Chang PJ , Oon LL , Sue A , Teo CG , Tan CK .
Am J Trop Med Hyg 2017 96 (4) 922-928
Analysis of complete genomes of the rubella virus genotypes 1E and 2B which circulated in China, 2000-2013.
Zhu Z , Chen MH , Abernathy E , Icenogle J , Zhou S , Wang C , Zhao C , Wang Y , Chen H , Si Y , Xu W .
Sci Rep 2016 6 39025
Using whole genome sequencing to identify resistance determinants and predict antimicrobial resistance phenotypes for year 2015 invasive pneumococcal disease isolates recovered in the United States.
Metcalf BJ , Chochua S , Gertz RE Jr , Li Z , Walker H , Tran T , Hawkins PA , Glennen A , Lynfield R , Li Y , McGee L , Beall B .
Clin Microbiol Infect 2016 22 (12) 1002 e1-1002 e8 type
Penicillin-Binding Protein Transpeptidase Signatures for Tracking and Predicting ß-Lactam Resistance Levels in Streptococcus pneumoniae.
Li Y , Metcalf BJ , Chochua S , Li Z , Gertz RE Jr , Walker H , Hawkins PA , Tran T , Whitney CG , McGee L , Beall BW .
mBio 2016 7 (3)
Chronic Infection With Camelid Hepatitis E Virus in a Liver-transplant Recipient Who Regularly Consumes Camel Meat and Milk.
Lee GH , Tan BH , Teo EC , Lim SG , Dan YY , Wee A , Aw PP , Zhu Y , Hibberd ML , Tan CK , Purdy MA , Teo CG .
Gastroenterology 2015 150 (2) 355-7 e3
TOP