CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Jul 18, 2025. (Total: 6743 publications)

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Records 1-30 (of 63 Records)

Query Trace: Winchell J[original query]
Broth microdilution protocol for determining antimicrobial susceptibility of Legionella pneumophila to clinically relevant antimicrobials Sewell M , Farley C , Portal EAR , Lindsay D , Ricci ML , Jarraud S , Scaturro M , Descours G , Krøvel AV , Barton R , Boostom I , Ure R , Kese D , Gaia V , Golob M , Paukner S , Ginevra C , Afshar B , Nadarajah S , Wybo I , Michel C , Echahdi F , González-Rubio JM , González-Camacho F , Mentasti M , Flountzi AS , Petzold M , Moran-Gilad J , Uldum S , Winchell J , Wooton M , Bernard K , Jones LC , Chalker VJ , Spiller OB . J Microbiol Methods 2024 228 107071
Clinical and epidemiologic features of mycoplasma pneumoniae infection among adults hospitalized with community-acquired pneumonia Kutty PK , Jain S , Diaz MH , Self WH , Williams D , Zhu Y , Grijalva CG , Edwards KM , Wunderink RG , Winchell J , Hicks LA . Int J Med Sci 2024 21 (15) 3003-3009
Expanded geographic distribution for two Legionella pneumophila sequence types of clinical concern Hamlin JAP , Kozak-Muiznieks NA , Mercante JW , Rishishwar L , Norris ET , Gaines AB , Ishaq MK , Winchell JM , Willby MJ . mSphere 2024 e0075623
Genomic analysis of Chlamydia psittaci from a multistate zoonotic outbreak in two chicken processing plants Wolff BJ , Waller JL , Benitez AJ , Gaines A , Conley AB , Rishishwar L , Chande AT , Morrison SS , Jordan IK , Diaz MH , Winchell JM . J Genomics 2023 11 40-44
Multiplex Real-time PCR Assay for the Detection of all Chlamydia Species and Simultaneous Differentiation of C. psittaci and C. pneumoniae in Human Clinical Specimens. Wolff BJ , Gaines A , Conley AB , Norris E , Rishishwar L , Chande AT , Yang E , Diaz MH , Winchell JM . Ann Lab Med 2023 43 (4) 375-380
Effect of Time Since Death on Multipathogen Molecular Test Results of Postmortem Specimens Collected Using Minimally Invasive Tissue Sampling Techniques. Dawa J , Walong E , Onyango C , Mathaiya J , Muturi P , Bunei M , Ochieng W , Barake W , Seixas JN , Mayieka L , Ochieng M , Omballa V , Lidechi S , Hunsperger E , Otieno NA , Ritter JM , Widdowson MA , Diaz MH , Winchell JM , Martines RB , Zaki SR , Chaves SS . Clin Infect Dis 2021 73 S360-s367
Use of Real-Time PCR for Chlamydia psittaci Detection in Human Specimens During an Outbreak of Psittacosis - Georgia and Virginia, 2018. McGovern OL , Kobayashi M , Shaw KA , Szablewski C , Gabel J , Holsinger C , Drenzek C , Brennan S , Milucky J , Farrar JL , Wolff BJ , Benitez AJ , Thurman KA , Diaz MH , Winchell JM , Schrag S . MMWR Morb Mortal Wkly Rep 2021 70 (14) 505-509
The epidemiology and estimated etiology of pathogens detected from the upper respiratory tract of adults with severe acute respiratory infections in multiple countries, 2014-2015. Milucky J , Pondo T , Gregory CJ , Iuliano D , Chaves SS , McCracken J , Mansour A , Zhang Y , Aleem MA , Wolff B , Whitaker B , Whistler T , Onyango C , Lopez MR , Liu N , Rahman MZ , Shang N , Winchell J , Chittaganpitch M , Fields B , Maldonado H , Xie Z , Lindstrom S , Sturm-Ramirez K , Montgomery J , Wu KH , Van Beneden CA . PLoS One 2020 15 (10) e0240309
Detection and characterization of diphtheria toxin gene-bearing Corynebacterium species through a new real-time PCR assay. Williams MM , Waller JL , Aneke JS , Weigand MR , Diaz MH , Bowden KE , Simon AK , Peng Y , Xiaoli L , Cassiday PK , Winchell J , Tondella ML . J Clin Microbiol 2020 58 (10)
Evaluation of Commercial Molecular Diagnostic Methods for the Detection and Determination of Macrolide Resistance in Mycoplasma pneumoniae . Leal SMJr , Totten AH , Xiao L , Crabb DM , Ratliff A , Duffy LB , Fowler KB , Mixon E , Winchell JM , Diaz MH , Benitez AJ , Wolff BJ , Qin X , Tang YW , Gonzalez M , Selvarangan R , Hong T , Brooks E , Dallas S , Atkinson TP , Zheng X , Dien Bard J , Waites KB . J Clin Microbiol 2020 58 (6)
Development and Implementation of Multiplex TaqMan Array Cards for Specimen Testing at Child Health and Mortality Prevention Surveillance Site Laboratories. Diaz MH , Waller JL , Theodore MJ , Patel N , Wolff BJ , Benitez AJ , Morris T , Raghunathan PL , Breiman RF , Whitney CG , Blau DM , Winchell JM . Clin Infect Dis 2019 69 S311-s321
Use of TaqMan Array card for the detection of respiratory viral pathogens in children under 5 years old hospitalised with acute medical illness in Ballabgarh, Haryana, India. Gaur B , Saha S , Iuliano AD , Rai SK , Krishnan A , Jain S , Whitaker B , Winchell J , Lal RB , Broor S . Indian J Med Microbiol 2019 37 (1) 105-108
Surveillance for incidence and etiology of early-onset neonatal sepsis in Soweto, South Africa. Velaphi SC , Westercamp M , Moleleki M , Pondo T , Dangor Z , Wolter N , von Gottberg A , Shang N , Demirjian A , Winchell JM , Diaz MH , Nakwa F , Okudo G , Wadula J , Cutland C , Schrag SJ , Madhi SA . PLoS One 2019 14 (4) e0214077
Culture of Clinical Specimens Reveals Extensive Diversity of Legionella pneumophila Strains in Arizona. Raphael BH , Huynh T , Brown E , Smith JC , Ruberto I , Getsinger L , White S , Winchell JM . mSphere 2019 4 (1)
Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1. Mercante JW , Caravas JA , Ishaq MK , Kozak-Muiznieks NA , Raphael BH , Winchell JM . PLoS One 2018 13 (10) e0206110
Epidemiology and Molecular Identification and Characterization of Mycoplasma pneumoniae, South Africa, 2012-2015. Carrim M , Wolter N , Benitez AJ , Tempia S , du Plessis M , Walaza S , Moosa F , Diaz MH , Wolff BJ , Treurnicht FK , Hellferscee O , Dawood H , Variava E , Cohen C , Winchell JM , von Gottberg A . Emerg Infect Dis 2018 24 (3) 506-513
Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies. Kozak-Muiznieks NA , Morrison SS , Mercante JW , Ishaq MK , Johnson T , Caravas J , Lucas CE , Brown E , Raphael BH , Winchell JM . Infect Genet Evol 2018 59 172-185
Development of a multiplex TaqMan real-time PCR assay for the detection of Chlamydia psittaci and Chlamydia pneumoniae in human clinical specimens. Wolff BJ , Morrison SS , Winchell JM . Diagn Microbiol Infect Dis 2017 90 (3) 167-170
Mycoplasma hominis Infections Transmitted Through Amniotic Tissue Product. Novosad SA , Basavaraju SV , Annambhotla P , Mohr M , Halpin A , Foy L , Chmielewski R , Winchell JM , Benitez AJ , Morrison SS , Johnson T , Crabb DM , Ratliff AE , Waites K , Kuehnert MJ . Clin Infect Dis 2017 65 (7) 1152-1158
Molecular characterization of Mycoplasma pneumoniae infections in two rural populations of Thailand from 2009-2012. Whistler T , Sawatwong P , Diaz MH , Benitez AJ , Wolff BJ , Sapchookul P , Thamthitiwat S , Winchell JM . J Clin Microbiol 2017 55 (7) 2222-2233
Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants. Diaz MH , Desai HP , Morrison SS , Benitez AJ , Wolff BJ , Caravas J , Read TD , Dean D , Winchell JM . PLoS One 2017 12 (4) e0174701
Multi-center evaluation of one commercial and 12 in-house real-time PCR assays for detection of Mycoplasma pneumoniae. Dumke R , Benitez AJ , Chalker V , Gullsby K , Henrich B , Hidalgo-Grass C , Hoogenboezem T , Kese D , Loens K , Maaskant J , Michael-Gayego A , Moses AE , Nir-Paz R , Pas SD , Pereyre S , Petersen RF , Rosenblatt M , van Rossum AM , Uldum SA , Unger WW , Ursi D , Winchell JM , Bebear C . Diagn Microbiol Infect Dis 2017 88 (2) 111-114
Complete Genome Sequence of Mycoplasma pneumoniae Type 2 Reference Strain FH Using Single-Molecule Real-Time Sequencing Technology. Desai HP , Morrison SS , Diaz MH , Benitez AJ , Wolff BJ , Winchell JM . Genome Announc 2017 5 (8)
Complete Genome Sequences of Legionella pneumophila subsp. fraseri Strains Detroit-1 and Dallas 1E. Raphael BH , Kozak-Muiznieks NA , Morrison SS , Mercante JW , Winchell JM . Genome Announc 2017 5 (5)
Epidemiology and Molecular Characteristics of Mycoplasma pneumoniae During an Outbreak of M. pneumoniae-Associated Stevens-Johnson Syndrome. Watkins LK , Olson D , Diaz MH , Lin X , Demirjian A , Benitez AJ , Winchell JM , Robinson CC , Bol KA , Glode MP , Dominguez SR , Miller LA , Kutty PK . Pediatr Infect Dis J 2017 36 (6) 564-571
Development of a multiplex taqMan real-time PCR assay for typing of Mycoplasma pneumoniae based on type-specific indels identified through whole genome sequencing. Wolff BJ , Benitez AJ , Desai HP , Morrison SS , Diaz MH , Winchell JM . Diagn Microbiol Infect Dis 2016 87 (3) 203-206
Genomic Analysis Reveals Novel Diversity among the 1976 Philadelphia Legionnaires' Disease Outbreak Isolates and Additional ST36 Strains. Mercante JW , Morrison SS , Desai HP , Raphael BH , Winchell JM . PLoS One 2016 11 (9) e0164074
Dynamics of genome change among Legionella species. Joseph SJ , Cox D , Wolff B , Morrison SS , Kozak-Muiznieks NA , Frace M , Didelot X , Castillo-Ramirez S , Winchell J , Read TD , Dean D . Sci Rep 2016 6 33442
Complete Genome Sequences of the Historical Legionella pneumophila Strains OLDA and Pontiac. Mercante JW , Morrison SS , Raphael BH , Winchell JM . Genome Announc 2016 4 (4)
Complete Genome Sequences of Three Outbreak-Associated Legionella pneumophila Isolates. Morrison SS , Desai HP , Mercante JW , Lapierre P , Raphael BH , Musser K , Winchell JM . Genome Announc 2016 4 (4)