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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Oct 07, 2024. (Total: 6342 publications)
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Records 1-30 (of 182 Records)
Query Trace: West R[original query]
Characterization of avian influenza viruses detected in Kenyan live bird markets and wild bird habitats reveal genetically diverse subtypes and high proportion of A(H9N2), 2018-2020
Munyua P , Osoro E , Jones J , Njogu G , Yang G , Hunsperger E , Szablewski CM , Njoroge R , Marwanga D , Oyas H , Andagalu B , Ndanyi R , Otieno N , Obanda V , Nasimiyu C , Njagi O , DaSilva J , Jang Y , Barnes J , Emukule GO , Onyango CO , Davis CT .
Viruses 2024 16 (9) type
Applying MALDI-TOF MS to resolve morphologic and genetic similarities between two Dermacentor tick species of public health importance
Galletti Mfbm , Hecht JA , McQuiston JR , Gartin J , Cochran J , Blocher BH , Ayres BN , Allerdice MEJ , Beati L , Nicholson WL , Snellgrove AN , Paddock CD .
Sci Rep 2024 14 (1) 19834 type
Genetic tracking of a rabid coyote (Canis latrans) detected beyond a rabies enzootic area in West Virginia, US
Hopken MW , Gigante C , Gilbert AT , Chipman RB , Kirby JD , Condori RE , Mills S , Hartley C , Forbes J , Dettinger L , Xia D , Li Y , vonHoldt B .
J Wildl Dis 2024 60 (3) 745-752 type
Human Orthohantavirus disease prevalence and genotype distribution in the U.S., 2008–2020: a retrospective observational study
Whitmer SLM , Whitesell A , Mobley M , Talundzic E , Shedroff E , Cossaboom CM , Messenger S , Deldari M , Bhatnagar J , Estetter L , Zufan S , Cannon D , Chiang CF , Gibbons A , Krapiunaya I , Morales-Betoulle M , Choi M , Knust B , Amman B , Montgomery JM , Shoemaker T , Klena JD .
Lancet Reg Health - Am 2024 37 type
Sosuga virus detected in Egyptian rousette bats (Rousettus aegyptiacus) in Sierra Leone
Amman BR , Koroma AH , Schuh AJ , Conteh I , Sealy TK , Foday I , Johnny J , Bakarr IA , Whitmer SLM , Wright EA , Gbakima AA , Graziano J , Bangura C , Kamanda E , Osborne A , Saidu E , Musa JA , Bangura DF , Williams SMT , Fefegula GM , Sumaila C , Jabaty J , James FH , Jambai A , Garnett K , Kamara TF , Towner JS , Lebbie A .
Viruses 2024 16 (4) type
The National Wastewater Surveillance System (NWSS): From inception to widespread coverage, 2020-2022, United States
Adams C , Bias M , Welsh RM , Webb J , Reese H , Delgado S , Person J , West R , Shin S , Kirby A .
Sci Total Environ 2024 171566 type
Transcontinental movement of Asian genotype chikungunya virus.
Lanciotti RS , Valadere AM .
Emerg Infect Dis 2014 20 (8) 1400-2
Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.
Pop M , Walker AW , Paulson J , Lindsay B , Antonio M , Hossain MA , Oundo J , Tamboura B , Mai V , Astrovskaya I , Corrada Bravo H , Rance R , Stares M , Levine MM , Panchalingam S , Kotloff K , Ikumapayi UN , Ebruke C , Adeyemi M , Ahmed D , Ahmed F , Alam MT , Amin R , Siddiqui S , Ochieng JB , Ouma E , Juma J , Mailu E , Omore R , Morris JG , Breiman RF , Saha D , Parkhill J , Nataro JP , Stine OC .
Genome Biol 2014 15 (6) R76
Nhumirim virus, a novel flavivirus isolated from mosquitoes from the Pantanal, Brazil.
Pauvolid-Corrêa A , Solberg O , Couto-Lima D , Kenney J , Serra-Freire N , Brault A , Nogueira R , Langevin S , Komar N .
Arch Virol 2015 160 (1) 21-7
Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases.
Arias A , Watson SJ , Asogun D , Tobin EA , Lu J , Phan MVT , Jah U , Wadoum REG , Meredith L , Thorne L , Caddy S , Tarawalie A , Langat P , Dudas G , Faria NR , Dellicour S , Kamara A , Kargbo B , Kamara BO , Gevao S , Cooper D , Newport M , Horby P , Dunning J , Sahr F , Brooks T , Simpson AJH , Groppelli E , Liu G , Mulakken N , Rhodes K , Akpablie J , Yoti Z , Lamunu M , Vitto E , Otim P , Owilli C , Boateng I , Okoror L , Omomoh E , Oyakhilome J , Omiunu R , Yemisis I , Adomeh D , Ehikhiametalor S , Akhilomen P , Aire C , Kurth A , Cook N , Baumann J , Gabriel M , Wölfel R , Di Caro A , Carroll MW , Günther S , Redd J , Naidoo D , Pybus OG , Rambaut A , Kellam P , Goodfellow I , Cotten M .
Virus Evol 2016 2 (1) vew016
Phylogeny of Zika Virus in Western Hemisphere, 2015.
Lanciotti RS , Lambert AJ , Holodniy M , Saavedra S , Signor Ldel C .
Emerg Infect Dis 2016 22 (5) 933-5
Identification of the flavivirus conserved residues in the envelope protein hinge region for the rational design of a candidate West Nile live-attenuated vaccine
Maloney BE , Carpio KL , Bilyeu AN , Saunders DRD , Park SL , Pohl AE , Ball NC , Raetz JL , Huang CY , Higgs S , Barrett ADT , Roman-Sosa G , Kenney JL , Vanlandingham DL , Huang YS .
NPJ Vaccines 2023 8 (1) 172 type
A novel tetra-primer ARMS-PCR approach for the molecular karyotyping of chromosomal inversion 2Ru in the main malaria vectors Anopheles gambiae and Anopheles coluzzii
Pichler V , Sanou A , Love RR , Caputo B , Pombi M , Toe KH , Guelbeogo MW , Sagnon N , Ferguson HM , Ranson H , Torre AD , Besansky NJ .
Parasit Vectors 2023 16 (1) 388 type
How the orthodox features of orthopoxviruses led to an unorthodox Mpox outbreak: What we've learned, and what we still need to understand
Brooks JT , Reynolds MG , Torrone E , McCollum A , Spicknall IH , Gigante CM , Li Y , Satheshkumar PS , Quilter LAS , Rao AK , O'Shea J , Guagliardo SAJ , Townsend M , Hutson CL .
J Infect Dis 2023 type
Assembly and phylogeographical analysis of novel Taenia solium mitochondrial genomes suggest stratification within the African-American genotype
Jiménez-Avalos G , Soto-Obando A , Solis M , Gilman RH , Cama V , Gonzalez AE , García HH , Sheen P , Requena D , Zimic M .
Parasit Vectors 2023 16 (1) 349 type
Intracellular diversity of WNV within circulating avian peripheral blood mononuclear cells reveals host-dependent patterns of polyinfection
Talmi-Frank D , Byas AD , Murrieta R , Weger-Lucarelli J , Rückert C , Gallichotte EN , Yoshimoto JA , Allen C , Bosco-Lauth AM , Graham B , Felix TA , Brault AC , Ebel GD .
Pathogens 2023 12 (6)
Ebola Virus Disease Outbreak - Democratic Republic of the Congo, August 2018-November 2019.
Aruna A , Mbala P , Minikulu L , Mukadi D , Bulemfu D , Edidi F , Bulabula J , Tshapenda G , Nsio J , Kitenge R , Mbuyi G , Mwanzembe C , Kombe J , Lubula L , Shako JC , Mossoko M , Mulangu F , Mutombo A , Sana E , Tutu Y , Kabange L , Makengo J , Tshibinkufua F , Ahuka-Mundeke S , Muyembe JJ , Ebola Response CDC , Alarcon Walter , Bonwitt Jesse , Bugli Dante , Bustamante Nirma D , Choi Mary , Dahl Benjamin A , DeCock Kevin , Dismer Amber , Doshi Reena , Dubray Christine , Fitter David , Ghiselli Margherita , Hall Noemi , Hamida Amen Ben , McCollum Andrea M , Neatherlin John , Raghunathan Pratima L , Ravat Fatima , Reynolds Mary G , Rico Adriana , Smith Nailah , Soke Gnakub Norbert , Trudeau Aimee T , Victory Kerton R , Worrell Mary Claire .
MMWR Morb Mortal Wkly Rep 2019 68 (50) 1162-1165 type
Effect of Plasmodium falciparum sulfadoxine-pyrimethamine resistance on the effectiveness of intermittent preventive therapy for malaria in pregnancy in Africa: a systematic review and meta-analysis.
van Eijk AM , Larsen DA , Kayentao K , Koshy G , Slaughter DEC , Roper C , Okell LC , Desai M , Gutman J , Khairallah C , Rogerson SJ , Hopkins Sibley C , Meshnick SR , Taylor SM , Ter Kuile FO .
Lancet Infect Dis 2019 19 (5) 546-556 type
Evaluation of an open forecasting challenge to assess skill of West Nile virus neuroinvasive disease prediction.
Holcomb KM , Mathis S , Staples JE , Fischer M , Barker CM , Beard CB , Nett RJ , Keyel AC , Marcantonio M , Childs ML , Gorris ME , Rochlin I , Hamins-Puértolas M , Ray EL , Uelmen JA , DeFelice N , Freedman AS , Hollingsworth BD , Das P , Osthus D , Humphreys JM , Nova N , Mordecai EA , Cohnstaedt LW , Kirk D , Kramer LD , Harris MJ , Kain MP , Reed EMX , Johansson MA .
Parasit Vectors 2023 16 (1) 11
Malaria among children under 10 years in 4 endemic health areas in Kisantu Health Zone: epidemiology and transmission.
Ilombe G , Matangila JR , Lulebo A , Mutombo P , Linsuke S , Maketa V , Mabanzila B , Wat'senga F , Van Bortel W , Fiacre A , Irish SR , Lutumba P , Van Geertruyden JP .
Malar J 2023 22 (1) 3
Retrospective molecular investigation of Mayaro and Oropouche viruses at the human-animal interface in West-central Brazil, 2016-2018.
Dias HG , de Lima RC , Barbosa LS , Souza TMA , Badolato-Correa J , Maia LMS , Ferreira RDS , Neves Nads , Costa MCS , Martins LR , Souza EM , Carvalho MDS , Araujo-Oliveira A , Marques WA , Sabino-Santos G , Marques MS , Macedo GC , Nantes WAG , Santos FM , Netto CC , Morgado TO , Bianchini MA , Correa SHR , Almeida JR , Campos LP , Souza IM , Barreto WTG , Porfírio G , Alencar JAF , Herrera HM , Shlessarenko RD , Cunha RVD , Azeredo EL , Salyer SJ , Komar N , Pauvolid-Corrêa A , Dos Santos FB .
PLoS One 2022 17 (11) e0277612 type
Multiple lineages of monkeypox virus detected in the United States, 2021-2022.
Gigante CM , Korber B , Seabolt MH , Wilkins K , Davidson W , Rao AK , Zhao H , Smith TG , Hughes CM , Minhaj F , Waltenburg MA , Theiler J , Smole S , Gallagher GR , Blythe D , Myers R , Schulte J , Stringer J , Lee P , Mendoza RM , Griffin-Thomas LA , Crain J , Murray J , Atkinson A , Gonzalez AH , Nash J , Batra D , Damon I , McQuiston J , Hutson CL , McCollum AM , Li Y .
Science 2022 378 (6619) eadd4153 type
Deep sequencing of HIV-1 reveals extensive subtype variation and drug resistance after failure of first-line antiretroviral regimens in Nigeria.
ElBouzidi K , Datir RP , Kwaghe V , Roy S , Frampton D , Breuer J , Ogbanufe O , Murtala-Ibrahim F , Charurat M , Dakum P , Sabin CA , Ndembi N , Gupta RK .
J Antimicrob Chemother 2022 77 (2) 474-482
Malaria Surveillance - United States, 2018.
Mace KE , Lucchi NW , Tan KR .
MMWR Surveill Summ 2022 71 (8) 1-35
Widespread interspecific phylogenetic tree incongruence between mosquito-borne and insect-specific flaviviruses at hotspots originally identified in Zika virus.
Gaunt Michael W, Pettersson John H-O, Kuno Goro, Gaunt Bill, de Lamballerie Xavier, Gould Ernest A. Virus evolution 2022 8(1) veac027 .
Virus evolution 2022 8(1) veac027 type
Monkeypox in a Traveler Returning from Nigeria - Dallas, Texas, July 2021.
Rao AK , Schulte J , Chen TH , Hughes CM , Davidson W , Neff JM , Markarian M , Delea KC , Wada S , Liddell A , Alexander S , Sunshine B , Huang P , Honza HT , Rey A , Monroe B , Doty J , Christensen B , Delaney L , Massey J , Waltenburg M , Schrodt CA , Kuhar D , Satheshkumar PS , Kondas A , Li Y , Wilkins K , Sage KM , Yu Y , Yu P , Feldpausch A , McQuiston J , Damon IK , McCollum AM .
MMWR Morb Mortal Wkly Rep 2022 71 (14) 509-516 type
SARS-CoV-2 incidence, transmission, and reinfection in a rural and an urban setting: results of the PHIRST-C cohort study, South Africa, 2020-21.
Cohen C , Kleynhans J , von Gottberg A , McMorrow ML , Wolter N , Bhiman JN , Moyes J , du Plessis M , Carrim M , Buys A , Martinson NA , Kahn K , Tollman S , Lebina L , Wafawanaka F , du Toit JD , Gómez-Olivé FX , Dawood FS , Mkhencele T , Sun K , Viboud C , Tempia S .
Lancet Infect Dis 2022 22 (6) 821-834
Cloud-Based Influenza Surveillance System in Emergency Departments Using Molecular-Based Testing: Advances and Challenges.
Shaw-Saliba K , Hansoti B , Burkom H , Martinez DA , DuVal A , Lee B , Chau P , McBride B , Hsieh YH , Sathananthan V , Persing D , Turnlund M , Shively R , Dugas A , Rothman RE .
West J Emerg Med 2022 23 (2) 115-123 type
Deep sequencing of HIV-1 reveals extensive subtype variation and drug resistance after failure of first-line antiretroviral regimens in Nigeria.
El Bouzidi Kate, Datir Rawlings P, Kwaghe Vivian, Roy Sunando, Frampton Dan, Breuer Judith, Ogbanufe Obinna, Murtala-Ibrahim Fati, Charurat Man, Dakum Patrick, Sabin Caroline A, Ndembi Nicaise, Gupta Ravindra K. The Journal of antimicrobial chemotherapy 2022 77(2) 474-482 .
The Journal of antimicrobial chemotherapy 2022 77(2) 474-482
The Need for a Tiered Registry for US Gene Drive Governance.
Warmbrod KL , Kobokovich AL , West R , Gronvall GK , Montague M .
Health Secur 2022 20 (1) 43-49 type
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