CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Sep 30, 2024. (Total: 6327 publications)

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Records 1-25 (of 25 Records)

Query Trace: Weigand MR[original query]
Strengthening Bordetella pertussis genomic surveillance by direct sequencing of residual positive specimens Peng Y , Williams MM , Xiaoli L , Simon A , Fueston H , Tondella ML , Weigand MR . J Clin Microbiol 2024 e0165323
Correction for Weigand et al., Complete Genome Sequences of Two Bordetella hinzii Strains Isolated from Humans. Weigand MR , Changayil S , Kulasekarapandian Y , Batra D , Loparev V , Juieng P , Rowe L , Sheth M , Davis JK , Tondella ML . Genome Announc 2016 4 (1)
Genomic characterization of Bordetella pertussis in South Africa, 2015-2019 Moosa F , du Plessis M , Weigand MR , Peng Y , Mogale D , de Gouveia L , Nunes MC , Madhi SA , Zar HJ , Reubenson G , Ismail A , Tondella ML , Cohen C , Walaza S , von Gottberg A , Wolter N . Microb Genom 2023 9 (12)
Genome-based prediction of cross-protective, HLA-DR-presented epitopes as putative vaccine antigens for multiple Bordetella species Natrajan MS , Hall JM , Weigand MR , Peng Y , Williams MM , Momin M , Damron FH , Dubey P , Tondella ML , Pawloski LC . Microbiol Spectr 2023 e0352723
Genomic characterization of cocirculating Corynebacterium diphtheriae and non-diphtheritic Corynebacterium species among forcibly displaced Myanmar nationals, 2017-2019 Xiaoli L , Peng Y , Williams MM , Lawrence M , Cassiday PK , Aneke JS , Pawloski LC , Shil SR , Rashid MO , Bhowmik P , Weil LM , Acosta AM , Shirin T , Habib ZH , Tondella ML , Weigand MR . Microb Genom 2023 9 (9)
Benchmark datasets for SARS-CoV-2 surveillance bioinformatics. Xiaoli L , Hagey JV , Park DJ , Gulvik CA , Young EL , Alikhan NF , Lawsin A , Hassell N , Knipe K , Oakeson KF , Retchless AC , Shakya M , Lo CC , Chain P , Page AJ , Metcalf BJ , Su M , Rowell J , Vidyaprakash E , Paden CR , Huang AD , Roellig D , Patel K , Winglee K , Weigand MR , Katz LS . PeerJ 2022 10 e13821
Complete Genome Sequences of Four Macrolide-Resistant Nondiphtheritic Corynebacterium Isolates. Xiaoli L , Peng Y , Williams MM , Cassiday PK , Nobles S , Unoarumhi Y , Weil LM , Shirin T , Habib ZH , Tondella ML , Weigand MR . Microbiol Resour Announc 2022 11 (9) e0049222
Towards comprehensive understanding of bacterial genetic diversity: large-scale amplifications in Bordetella pertussis and Mycobacterium tuberculosis. Abrahams JS , Weigand MR , Ring N , MacArthur I , Etty J , Peng S , Williams MM , Bready B , Catalano AP , Davis JR , Kaiser MD , Oliver JS , Sage JM , Bagby S , Tondella ML , Gorringe AR , Preston A . Microb Genom 2022 8 (2)
Genomic surveillance and improved molecular typing of Bordetella pertussis using wgMLST Weigand MR , Peng Y , Pouseele H , Kania D , Bowden KE , Williams MM , Tondella ML . J Clin Microbiol 2021 59 (5)
Genomic epidemiology of nontoxigenic Corynebacterium diphtheriae from King County, Washington State, USA between July 2018 and May 2019. Xiaoli L , Benoliel E , Peng Y , Aneke J , Cassiday PK , Kay M , McKeirnan S , Duchin JS , Kawakami V , Lindquist S , Acosta AM , DeBolt C , Tondella ML , Weigand MR . Microb Genom 2020 6 (12)
Detection and characterization of diphtheria toxin gene-bearing Corynebacterium species through a new real-time PCR assay. Williams MM , Waller JL , Aneke JS , Weigand MR , Diaz MH , Bowden KE , Simon AK , Peng Y , Xiaoli L , Cassiday PK , Winchell J , Tondella ML . J Clin Microbiol 2020 58 (10)
Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens. Weigand MR , Peng Y , Batra D , Burroughs M , Davis JK , Knipe K , Loparev VN , Johnson T , Juieng P , Rowe LA , Sheth M , Tang K , Unoarumhi Y , Williams MM , Tondella ML . mSystems 2019 4 (6)
Genomic Survey of Bordetella pertussis Diversity, United States, 2000-2013. Weigand MR , Williams MM , Peng Y , Kania D , Pawloski LC , Tondella ML . Emerg Infect Dis 2019 25 (4) 780-783
imGLAD: accurate detection and quantification of target organisms in metagenomes. Castro JC , Rodriguez RLm , Harvey WT , Weigand MR , Hatt JK , Carter MQ , Konstantinidis KT . PeerJ 2018 6 e5882
Screening and genomic characterization of filamentous hemagglutinin-deficient Bordetella pertussis. Weigand MR , Pawloski LC , Peng Y , Ju H , Burroughs M , Cassiday PK , Davis JK , DuVall M , Johnson T , Juieng P , Knipe K , Loparev VN , Mathis MH , Rowe LA , Sheth M , Williams MM , Tondella ML . Infect Immun 2018 86 (4)
Complete Genome Sequences of Bordetella pertussis Isolates with Novel Pertactin-Deficient Deletions. Weigand MR , Peng Y , Cassiday PK , Loparev VN , Johnson T , Juieng P , Nazarian EJ , Weening K , Tondella ML , Williams MM . Genome Announc 2017 5 (37)
The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement. Weigand MR , Peng Y , Loparev V , Batra D , Bowden KE , Burroughs M , Cassiday PK , Davis JK , Johnson T , Juieng P , Knipe K , Mathis MH , Pruitt AM , Rowe L , Sheth M , Tondella ML , Williams MM . J Bacteriol 2017 199 (8)
Complete Genome Sequences of Four Bordetella pertussis Vaccine Reference Strains from Serum Institute of India. Weigand MR , Peng Y , Loparev V , Johnson T , Juieng P , Gairola S , Kumar R , Shaligram U , Gowrishankar R , Moura H , Rees J , Schieltz DM , Williamson Y , Woolfitt A , Barr J , Tondella ML , Williams MM . Genome Announc 2016 4 (6)
Metagenomics of two severe foodborne outbreaks provides diagnostic signatures and signs of co-infection not attainable by traditional methods. Huang AD , Luo C , Pena-Gonzalez A , Weigand MR , Tarr C , Konstantinidis KT . Appl Environ Microbiol 2016 83 (3)
Complete Genome Sequences of Four Different Bordetella sp. Isolates Causing Human Respiratory Infections. Weigand MR , Peng Y , Loparev V , Batra D , Bowden KE , Cassiday PK , Davis JK , Johnson T , Juieng P , Miner CE , Rowe L , Sheth M , Tondella ML , Williams MM . Genome Announc 2016 4 (5)
Complete Genome Sequences of Bordetella pertussis Vaccine Reference Strains 134 and 10536. Weigand MR , Peng Y , Loparev V , Batra D , Burroughs M , Johnson T , Juieng P , Rowe L , Tondella ML , Williams MM . Genome Announc 2016 4 (5)
Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics. Bowden KE , Weigand MR , Peng Y , Cassiday PK , Sammons S , Knipe K , Rowe LA , Loparev V , Sheth M , Weening K , Tondella ML , Williams MM . mSphere 2016 1 (3)
Bordetella pertussis Strain Lacking Pertactin and Pertussis Toxin. Williams MM , Sen K , Weigand MR , Skoff TH , Cunningham VA , Halse TA , Tondella ML . Emerg Infect Dis 2016 22 (2) 319-22
Complete Genome Sequences of Two Bordetella hinzii Strains Isolated from Humans. Weigand MR , Changayil S , Kulasekarapandian Y , Tondella ML . Genome Announc 2015 3 (4)
Genome-based discrimination between Group I Clostridium botulinum and Clostridium sporogenes strains: implications for bacterial taxonomy. Weigand MR , Pena-Gonzalez A , Shirey TB , Broeker RG , Ishaq MK , Konstantinidis KT , Raphael BH . Appl Environ Microbiol 2015 81 (16) 5420-9