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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Jun 28, 2022. (Total: 3910 publications since 2011)
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Records 1-30 (of 92 Records)
Query Trace: Tuberculosis[original query]
Pathogens detected using a syndromic molecular diagnostic platform in patients hospitalized with severe respiratory illness in South Africa in 2017.
Malefu Moleleki, Mignon du Plessis, Kedibone Ndlangisa, Cayla Reddy, Orienka Hellferscee, Omphe Mekgoe, Meredith McMorrow, Sibongile Walaza, Cheryl Cohen, Stefano Tempia, Anne von Gottberg, and Nicole Wolter
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2022
Discordant results of Xpert MTB/Rif assay and BACTEC MGIT 960 liquid culture to detect Mycobacterium tuberculosis in community screening in Vietnam.
Hai Viet Nguyen, Petra de Haas, Hoa Binh Nguyen, Nhung Viet Nguyen, Frank G J Cobelens, Veriko Mirtskhulava, Alyssa Finlay, Hung Van Nguyen, Pham T T Huyen, and Edine W Tiemersma
BMC infectious diseases 2022 22(1) 506
Use of Nucleic Acid Amplification Testing for Rapid Detection of Mycobacterium tuberculosis Complex Among US Tuberculosis Patients, 2011‒2017.
Varsha Kumar, Tracy L Dalton, Lori R Armstrong, Amy Whitesell, Rongxia Li, and Angela M Starks
Open forum infectious diseases 2022 8(11) ofab528
Characterizing tuberculosis transmission dynamics in high-burden urban and rural settings.
Jonathan P Smith, John E Oeltmann, Andrew N Hill, James L Tobias, Rosanna Boyd, Eleanor S Click, Alyssa Finlay, Chawangwa Mondongo, Nicola M Zetola, and Patrick K Moonan
Scientific reports 2022 12(1) 6780
Tuberculosis attributed to transmission within healthcare facilities, Botswana-The Kopanyo Study.
Jonathan P Smith, Chawangwa Modongo, Patrick K Moonan, Mbatshi Dima, Ogopotse Matsiri, Othusitse Fane, Eleanor S Click, Rosanna Boyd, Alyssa Finlay, Diya Surie, James L Tobias, Nicola M Zetola, and John E Oeltmann
Infection control and hospital epidemiology 2022 1-7
A Cluster-based Method to Quantify Individual Heterogeneity in Tuberculosis Transmission.
Jonathan P Smith, Neel R Gandhi, Benjamin J Silk, Ted Cohen, Benjamin Lopman, Kala Raz, Kathryn Winglee, Steve Kammerer, David Benkeser, Michael R Kramer, and Andrew N Hill
Epidemiology (Cambridge, Mass.) 2021 33(2) 217-227
Towards comprehensive understanding of bacterial genetic diversity: large-scale amplifications in Bordetella pertussis and Mycobacterium tuberculosis.
Jonathan S Abrahams, Michael R Weigand, Natalie Ring, Iain MacArthur, Joss Etty, Scott Peng, Margaret M Williams, Barret Bready, Anthony P Catalano, Jennifer R Davis, Michael D Kaiser, John S Oliver, Jay M Sage, Stefan Bagby, M Lucia Tondella, Andrew R Gorringe, and Andrew Preston
Microbial genomics 2022 8(2)
Model-based analysis of tuberculosis genotype clusters in the United States reveals high degree of heterogeneity in transmission, and state-level differences across California, Florida, New York, and Texas.
Sourya Shrestha, Kathryn Winglee, Andrew Hill, Tambi Shaw, Jonathan Smith, J Steve Kammerer, Benjamin J Silk, Suzanne Marks, and David Dowdy
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022
Bedaquiline Drug Resistance Emergence Assessment in Multidrug-Resistant Tuberculosis (MDR-TB): a 5-Year Prospective In Vitro Surveillance Study of Bedaquiline and Other Second-Line Drug Susceptibility Testing in MDR-TB Isolates.
Koné Kaniga, Rumina Hasan, Ruwen Jou, Edita Vasiliauskiene, Charoen Chuchottaworn, Nazir Ismail, Beverly Metchock, Skaidrius Miliauskas, Nguyen Viet Nhung, Camilla Rodrigues, Soyoun Shin, Hulya Simsek, Saijai Smithtikarn, Anh Le Thi Ngoc, Jirakan Boonyasopun, Mubin Kazi, Seungmo Kim, Phalin Kamolwat, Greta Musteikiene, Catherine Ann Sacopon, Sabira Tahseen, Laima Vasiliauskaite, Mei-Hua Wu, and Shaheed Vally Omar
Journal of clinical microbiology 2021 60(1) e0291920
Mutation of Mycobacterium tuberculosis and Implications for Using Whole-Genome Sequencing for Investigating Recent Tuberculosis Transmission.
Kristin N Nelson, Sarah Talarico, Shameer Poonja, Clinton J McDaniel, Martin Cilnis, Alicia H Chang, Kala Raz, Wendy S Noboa, Lauren Cowan, Tambi Shaw, James Posey, and Benjamin J Silk
Frontiers in public health 2022 9790544
Whole-Genome Sequencing to Identify Missed Rifampicin and Isoniazid Resistance Among Tuberculosis Isolates-Chennai, India, 2013-2016.
Sembulingam Tamilzhalagan, Sivakumar Shanmugam, Ashok Selvaraj, Sakthi Suba, Chittibabu Suganthi, Patrick K Moonan, Diya Surie, Mukesh Kumar Sathyanarayanan, Narayanan Shivaram Gomathi, Lavanya Jayabal, Kuldeep Singh Sachdeva, Sriram Selvaraju, Soumya Swaminathan, Srikanth Prasad Tripathy, Patricia J Hall, and Uma Devi Ranganathan
Frontiers in microbiology 2021 12720436
Tuberculosis screening among ambulatory people living with HIV: a systematic review and individual participant data meta-analysis.
Ashar Dhana, Yohhei Hamada, Andre P Kengne, Andrew D Kerkhoff, Molebogeng X Rangaka, Tamara Kredo, Annabel Baddeley, Cecily Miller, Satvinder Singh, Yasmeen Hanifa, Alison D Grant, Katherine Fielding, Dissou Affolabi, Corinne S Merle, Ablo Prudence Wachinou, Christina Yoon, Adithya Cattamanchi, Christopher J Hoffmann, Neil Martinson, Eyongetah Tabenyang Mbu, Melissa S Sander, Taye T Balcha, Sten Skogmar, Byron W P Reeve, Grant Theron, Gcobisa Ndlangalavu, Surbhi Modi, Joseph Cavanaugh, Susan Swindells, Richard E Chaisson, Faiz Ahmad Khan, Andrea A Howard, Robin Wood, Swe Swe Thit, Mar Mar Kyi, Josh Hanson, Paul K Drain, Adrienne E Shapiro, Tendesayi Kufa, Gavin Churchyard, Duc T Nguyen, Edward A Graviss, Stephanie Bjerrum, Isik S Johansen, Jill K Gersh, David J Horne, Sylvia M LaCourse, Haider Abdulrazzaq Abed Al-Darraji, Adeeba Kamarulzaman, Russell R Kempker, Nestani Tukvadze, David A Barr, Graeme Meintjes, and Gary Maartens
The Lancet. Infectious diseases 2021
Need for caution when interpreting Xpert MTB/RIF results for rifampin resistance among children.
W Murithi, E S Click, K D McCarthy, E Okeyo, R Sitati, I Anyango, A Okumu, W Mchembere, R Song, and K Cain
The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2021 25(11) 911-916
Notes from the Field: Multidrug-Resistant Tuberculosis Among Workers at Two Food Processing Facilities - Ohio, 2018-2019.
Amish Talwar, Rebekah Stewart, Sandy P Althomsons, Jessica Rinsky, David A Jackson, Maria E Galvis, Philip Graham, Moises A Huaman, James Karrer, Karthik Kondapally, Sarah Mitchell, Jonathan Wortham, and Sietske de Fijter
MMWR. Morbidity and mortality weekly report 2020 69(32) 1104-1105
Derivation and external validation of a risk score for predicting HIV-associated tuberculosis to support case finding and preventive therapy scale-up: A cohort study.
Andrew F Auld, Andrew D Kerkhoff, Yasmeen Hanifa, Robin Wood, Salome Charalambous, Yuliang Liu, Tefera Agizew, Anikie Mathoma, Rosanna Boyd, Anand Date, Ray W Shiraishi, George Bicego, Unami Mathebula-Modongo, Heather Alexander, Christopher Serumola, Goabaone Rankgoane-Pono, Pontsho Pono, Alyssa Finlay, James C Shepherd, Tedd V Ellerbrock, Alison D Grant, and Katherine Fielding
PLoS medicine 2021 18(9) e1003739
Logically Inferred Tuberculosis Transmission (LITT): A Data Integration Algorithm to Rank Potential Source Cases.
Kathryn Winglee, Clinton J McDaniel, Lauren Linde, Steve Kammerer, Martin Cilnis, Kala M Raz, Wendy Noboa, Jillian Knorr, Lauren Cowan, Sue Reynolds, James Posey, Jeanne Sullivan Meissner, Shameer Poonja, Tambi Shaw, Sarah Talarico, and Benjamin J Silk
Frontiers in public health 2021 9667337
Distribution and Clonality of drug-resistant tuberculosis in South Africa.
Halima Said, John Ratabane, Linda Erasmus, Yasmin Gardee, Shaheed Omar, Andries Dreyer, Farzana Ismail, Zaheda Bhyat, Tiisetso Lebaka, Minty van der Meulen, Thabisile Gwala, Adeboye Adelekan, Karidia Diallo, and Nazir Ismail
BMC microbiology 2021 21(1) 157
Tuberculosis Genotype Clusters and Transmission in the U.S., 2009-2018.
Jonathan M Wortham, Rongxia Li, Sandy P Althomsons, Steve Kammerer, Maryam B Haddad, and Krista M Powell
American journal of preventive medicine 2021
State-level prevalence estimates of latent tuberculosis infection in the United States by medical risk factors, demographic characteristics and nativity.
Ali Mirzazadeh, James G Kahn, Maryam B Haddad, Andrew N Hill, Suzanne M Marks, Adam Readhead, Pennan M Barry, Jennifer Flood, Jonathan H Mermin, and Priya B Shete
PloS one 2021 16(4) e0249012
Tuberculosis Outbreak Associated With Delayed Diagnosis and Long Infectious Periods in Rural Arkansas, 2010-2018.
Sarah M Labuda, Clinton McDaniel, Amish Talwar, Anthwan Braumuller, Sarah Parker, Stephanie McGaha, Carolynne Blissett, Jonathan Wortham, Leonard Mukasa, and Rebekah J Stewart
Public health reports (Washington, D.C. : 1974) 2021 33354921999167
Estimating and Evaluating Tuberculosis Incidence Rates Among People Experiencing Homelessness, United States, 2007-2016.
Julie L Self, Clint J McDaniel, Sapna Bamrah Morris, and Benjamin J Silk
Medical care 2021 59(Suppl 2) S175-S181
Developing National Genotype-Independent Indicators for Recent Mycobacterium Tuberculosis Transmission Using Pediatric Cases-United States, 2011-2017
Alexia V Harrist, Clinton J McDaniel, Jonathan M Wortham, and Sandy P Althomsons
Public health reports (Washington, D.C. : 1974) 2021 33354920985215
High prevalence of pulmonary tuberculosis among female sex workers, men who have sex with men, and transgender women in Papua New Guinea.
Barne Willie, Avi J Hakim, Steven G Badman, Damian Weikum, Rebecca Narokobi, Kelsey Coy, Josephine Gabuzzi, Simon Pekon, Samson Gene, Angelyn Amos, Martha Kupul, Parker Hou, Nick M Dala, David M Whiley, Johanna Wapling, John M Kaldor, Andrew J Vallely, and Angela Kelly-Hanku
Tropical medicine and health 2021 Jan 49(1) 4
Decreased plasma rifapentine concentrations associated with AADAC single nucleotide polymorphism in adults with tuberculosis.
Marc Weiner, Jon Gelfond, Teresa L Johnson-Pais, Melissa Engle, John L Johnson, William C Whitworth, Erin Bliven-Sizemore, Pheona Nsubuga, Susan E Dorman, Rada Savic, and
The Journal of antimicrobial chemotherapy 2020 Dec
Molecular evaluation of fluoroquinolone resistance in serial Mycobacterium tuberculosis isolates from individuals diagnosed with multidrug-resistant tuberculosis.
Melisa Willby, Paige Chopra, Darrin Lemmer, Katherine Klein, Tracy L Dalton, David M Engelthaler, Peter Cegielski, James E Posey, and
Antimicrobial agents and chemotherapy 2020 Oct
Multipronged Approach to Controlling a Tuberculosis Outbreak Among Persons Experiencing Homelessness.
Eva Muloma, Rebekah Stewart, Helen Townsend, Sarah Koch, Sarah Burkholder, Shanica Railey, Kelly White, Rachel Redington-Noble, and Virginia Caine
Journal of public health management and practice : JPHMP 2020 Sep
Tuberculosis transmission across three states: the story of a solid organ donor born in an endemic country, 2018.
Jefferson M Jones, Holenarasipur R Vikram, Michael Lauzardo, Amy Hill, Jeffrey Jones, Clinton Haley, Barbara Seaworth, Sara Oldham, Marcus Brown, Felipe Gutierrez, and Sridhar V Basavaraju
Transplant infectious disease : an official journal of the Transplantation Society 2020 Jun e13357
Transnational Record Linkage for Tuberculosis Surveillance and Program Evaluation.
Kaylynn Aiona, Phillip Lowenthal, John A Painter, Randall Reves, Jennifer Flood, Matthew Parker, Yunxin Fu, Kirsten Wall, and Nicholas D Walter
Public health reports (Washington, D.C. : 1974) 130(5) 475-84
Elevated Plasma Moxifloxacin Concentrations and SLCO1B1 g.-11187G>A Polymorphism in Adults with Pulmonary Tuberculosis.
Marc Weiner, Jon Gelfond, Teresa L Johnson-Pais, Melissa Engle, Charles A Peloquin, John L Johnson, Erin E Sizemore, and William R Mac Kenzie
Antimicrobial agents and chemotherapy 2018 62(5)
Evaluation of 24-locus MIRU-VNTR genotyping in Mycobacterium tuberculosis cluster investigations in four jurisdictions in the United States, 2006-2010.
Larry D Teeter, J Steven Kammerer, Smita Ghosh, Duc T M Nguyen, Padmaja Vempaty, Jane Tapia, Roque Miramontes, Wendy A Cronin, Edward A Graviss, and
Tuberculosis (Edinburgh, Scotland) 2017 1069-15
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