CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Sep 30, 2024. (Total: 6327 publications)

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Records 1-30 (of 46 Records)

Query Trace: Talundzic E[original query]
Human Orthohantavirus disease prevalence and genotype distribution in the U.S., 2008–2020: a retrospective observational study Whitmer SLM , Whitesell A , Mobley M , Talundzic E , Shedroff E , Cossaboom CM , Messenger S , Deldari M , Bhatnagar J , Estetter L , Zufan S , Cannon D , Chiang CF , Gibbons A , Krapiunaya I , Morales-Betoulle M , Choi M , Knust B , Amman B , Montgomery JM , Shoemaker T , Klena JD . Lancet Reg Health - Am 2024 37
Trends of Plasmodium falciparum molecular markers associated with resistance to artemisinins and reduced susceptibility to lumefantrine in Mainland Tanzania from 2016 to 2021 Bakari C , Mandara CI , Madebe RA , Seth MD , Ngasala B , Kamugisha E , Ahmed M , Francis F , Bushukatale S , Chiduo M , Makene T , Kabanywanyi AM , Mahende MK , Kavishe RA , Muro F , Mkude S , Mandike R , Molteni F , Chacky F , Bishanga DR , Njau RJA , Warsame M , Kabula B , Nyinondi SS , Lucchi NW , Talundzic E , Venkatesan M , Moriarty LF , Serbantez N , Kitojo C , Reaves EJ , Halsey ES , Mohamed A , Udhayakumar V , Ishengoma DS . Malar J 2024 23 (1) 71
2020 Ebola virus disease outbreak in Équateur Province, Democratic Republic of the Congo: a retrospective genomic characterisation Kinganda-Lusamaki E , Whitmer S , Lokilo-Lofiko E , Amuri-Aziza A , Muyembe-Mawete F , Makangara-Cigolo JC , Makaya G , Mbuyi F , Whitesell A , Kallay R , Choi M , Pratt C , Mukadi-Bamuleka D , Kavunga-Membo H , Matondo-Kuamfumu M , Mambu-Mbika F , Ekila-Ifinji R , Shoemaker T , Stewart M , Eng J , Rajan A , Soke GN , Fonjungo PN , Otshudiema JO , Folefack GLT , Pukuta-Simbu E , Talundzic E , Shedroff E , Bokete JL , Legand A , Formenty P , Mores CN , Porzucek AJ , Tritsch SR , Kombe J , Tshapenda G , Mulangu F , Ayouba A , Delaporte E , Peeters M , Wiley MR , Montgomery JM , Klena JD , Muyembe-Tamfum JJ , Ahuka-Mundeke S , Mbala-Kingebeni P . Lancet Microbe 2024
HantaNet: A new microbetrace application for hantavirus classification, genomic surveillance, epidemiology and outbreak investigations Cintron R , Whitmer SLM , Moscoso E , Campbell EM , Kelly R , Talundzic E , Mobley M , Chiu KW , Shedroff E , Shankar A , Montgomery JM , Klena JD , Switzer WM . Viruses 2023 15 (11)
Simultaneous targeted amplicon deep sequencing and library preparation for a time and cost-effective universal parasite diagnostic sequencing approach Gondard M , Lane M , Barratt J , Talundzic E , Qvarnstrom Y . Parasitol Res 2023 122 (12) 3243-3256
Molecular Markers of Sulfadoxine-Pyrimethamine Resistance in Samples from Children with Uncomplicated Plasmodium falciparum at Three Sites in Angola in 2019. Rosillo SR , Dimbu PR , Cândido ALM , Oh JM , Ferreira CM , Nieto Andrade B , Labuda S , Horth R , Kelley J , Morais JFM , Fortes F , Martins JF , Talundzic E , Pluciński MM . Antimicrob Agents Chemother 2023 67 (4) e0160122
Portable and cost-effective genetic detection and characterization of Plasmodium falciparum hrp2 using the MinION sequencer. Sabin S , Jones S , Patel D , Subramaniam G , Kelley J , Aidoo M , Talundzic E . Sci Rep 2023 13 (1) 2893
The first complete genome of the simian malaria parasite Plasmodium brasilianum. Bajic M , Ravishankar S , Sheth M , Rowe LA , Pacheco MA , Patel DS , Batra D , Loparev V , Olsen C , Escalante AA , Vannberg F , Udhayakumar V , Barnwell JW , Talundzic E . Sci Rep 2022 12 (1) 19802
Polymorphic Molecular Signatures in Variable Regions of the Plasmodium falciparum var2csa DBL3x Domain Are Associated with Virulence in Placental Malaria. Talundzic E , Scott S , Owino SO , Campo DS , Lucchi NW , Udhayakumar V , Moore JM , Peterson DS . Pathogens 2022 11 (5)
Evaluation of a parasite-density based pooled targeted amplicon deep sequencing (TADS) method for molecular surveillance of Plasmodium falciparum drug resistance genes in Haiti. Louha S , Herman C , Gupta M , Patel D , Kelley J , Oh JM , Guru J , Lemoine JF , Chang MA , Venkatachalam U , Rogier E , Talundzic E . PLoS One 2022 17 (1) e0262616
Plasmodium falciparum kelch 13 Mutations, 9 Countries in Africa, 2014-2018. Schmedes SE , Patel D , Dhal S , Kelley J , Svigel SS , Dimbu PR , Adeothy AL , Kahunu GM , Nkoli PM , Beavogui AH , Kariuki S , Mathanga DP , Koita O , Ishengoma D , Mohamad A , Hawela M , Moriarty LF , Samuels AM , Gutman J , Plucinski MM , Udhayakumar V , Zhou Z , Lucchi NW , Venkatesan M , Halsey ES , Talundzic E . Emerg Infect Dis 2021 27 (7) 1902-1908
Therapeutic efficacy of artemether-lumefantrine and artesunate-amodiaquine for the treatment of uncomplicated Plasmodium falciparum malaria in Mali, 2015-2016. Diarra Y , Koné O , Sangaré L , Doumbia L , Haidara DBB , Diallo M , Maiga A , Sango HA , Sidibé H , Mihigo J , Nace D , Ljolje D , Talundzic E , Udhayakumar V , Eckert E , Woodfill CJ , Moriarty LF , Lim P , Krogstad DJ , Halsey ES , Lucchi NW , Koita OA . Malar J 2021 20 (1) 235
Targeted deep amplicon sequencing of antimalarial resistance markers in Plasmodium falciparum isolates from Cameroon. L'Episcopia M , Kelley J , Dongho BGD , Patel D , Schmedes S , Ravishankar S , Perrotti E , Modiano D , Lucchi NW , Russo G , Talundzic E , Severini C . Int J Infect Dis 2021 107 234-241
Association of Plasmodium falciparum kelch13 R561H genotypes with delayed parasite clearance in Rwanda: an open-label, single-arm, multicentre, therapeutic efficacy study. Uwimana A , Umulisa N , Venkatesan M , Svigel SS , Zhou Z , Munyaneza T , Habimana RM , Rucogoza A , Moriarty LF , Sandford R , Piercefield E , Goldman I , Ezema B , Talundzic E , Pacheco MA , Escalante AA , Ngamije D , Mangala JN , Kabera M , Munguti K , Murindahabi M , Brieger W , Musanabaganwa C , Mutesa L , Udhayakumar V , Mbituyumuremyi A , Halsey ES , Lucchi NW . Lancet Infect Dis 2021 21 (8) 1120-1128
Sensitive universal detection of blood parasites by selective pathogen-DNA enrichment and deep amplicon sequencing. Flaherty BR , Barratt J , Lane M , Talundzic E , Bradbury RS . Microbiome 2021 9 (1) 1
Continued low efficacy of artemether-lumefantrine in Angola, 2019. Dimbu PR , Horth R , Cândido ALM , Ferreira CM , Caquece F , Garcia LEA , André K , Pembele G , Jandondo D , Bondo BJ , Nieto Andrade B , Labuda S , Ponce de León G , Kelley J , Patel D , Svigel SS , Talundzic E , Lucchi N , Morais JFM , Fortes F , Martins JF , Pluciński MM . Antimicrob Agents Chemother 2020 65 (2)
Evaluation of an ensemble-based distance statistic for clustering MLST datasets using epidemiologically defined clusters of cyclosporiasis. Nascimento FS , Barratt J , Houghton K , Plucinski M , Kelley J , Casillas S , Bennett CC , Snider C , Tuladhar R , Zhang J , Clemons B , Madison-Antenucci S , Russell A , Cebelinski E , Haan J , Robinson T , Arrowood MJ , Talundzic E , Bradbury RS , Qvarnstrom Y . Epidemiol Infect 2020 148 e172
Malaria Risk and Prevention in Asian Migrants to Angola. Martins JF , Marques C , Nieto-Andrade B , Kelley J , Patel D , Nace D , Herman C , Barratt J , Ponce de Leon G , Talundzic E , Rogier E , Halsey ES , Plucinski MM . Am J Trop Med Hyg 2020 103 (5) 1918-1926
One-step PCR: A novel protocol for determination of pfhrp2 deletion status in Plasmodium falciparum. Jones S , Subramaniam G , Plucinski MM , Patel D , Padilla J , Aidoo M , Talundzic E . PLoS One 2020 15 (7) e0236369
Efficacy and safety of artesunate-amodiaquine and artemether-lumefantrine and prevalence of molecular markers associated with resistance, Guinea: an open-label two-arm randomised controlled trial. Beavogui AH , Camara A , Delamou A , Diallo MS , Doumbouya A , Kourouma K , Bouedouno P , Guilavogui T , Dos Santos Souza S , Kelley J , Talundzic E , Fofana A , Plucinski MM . Malar J 2020 19 (1) 223
Development of a workflow for identification of nuclear genotyping markers for Cyclospora cayetanensis. Houghton KA , Lomsadze A , Park S , Nascimento FS , Barratt J , Arrowood MJ , VanRoey E , Talundzic E , Borodovsky M , Qvarnstrom Y . Parasite 2020 27 24
Targeted deep amplicon sequencing of kelch 13 and cytochrome b in Plasmodium falciparum isolates from an endemic African country using the Malaria Resistance Surveillance (MaRS) protocol. L'Episcopia M , Kelley J , Patel D , Schmedes S , Ravishankar S , Menegon M , Perrotti E , Nurahmed AM , Talha AA , Nour BY , Lucchi N , Severini C , Talundzic E . Parasit Vectors 2020 13 (1) 137
Next Generation Sequencing and Bioinformatics Methodologies for Infectious Disease Research and Public Health: Approaches, Applications, and Considerations for Development of Laboratory Capacity. Maljkovic Berry I , Melendrez MC , Bishop-Lilly KA , Rutvisuttinunt W , Pollett S , Talundzic E , Morton L , Jarman RG . J Infect Dis 2019 221 S292-S307
A global genotyping survey of Strongyloides stercoralis and Strongyloides fuelleborni using deep amplicon sequencing. Barratt JLN , Lane M , Talundzic E , Richins T , Robertson G , Formenti F , Pritt B , Verocai G , Nascimento de Souza J , Mato Soares N , Traub R , Buonfrate D , Bradbury RS . PLoS Negl Trop Dis 2019 13 (9) e0007609
Mitochondrial Junction Region as Genotyping Marker for Cyclospora cayetanensis. Nascimento FS , Barta JR , Whale J , Hofstetter JN , Casillas S , Barratt J , Talundzic E , Arrowood MJ , Qvarnstrom Y . Emerg Infect Dis 2019 25 (7) 1314-1319
Genotyping Genetically Heterogeneous Cyclospora cayetanensis Infections to Complement Epidemiological Case Linkage. Barratt JLN , Park S , Nascimento FS , Hofstetter J , Plucinski M , Casillas S , Bradbury RS , Arrowood MJ , Qvarnstrom Y , Talundzic E . Parasitology 2019 146 (10) 1-33
Evolution and genetic diversity of the k13 gene associated with artemisinin delayed parasite clearance in Plasmodium falciparum . Pacheco MA , Kadakia ER , Chaudhary Z , Perkins DJ , Kelley J , Ravishankar S , Cranfield M , Talundzic E , Udhayakumar V , Escalante AA . Antimicrob Agents Chemother 2019 63 (8)
Using the Plasmodium mitochondrial genome for classifying mixed-species infections and inferring the geographical origin of P. falciparum parasites imported to the U.S. Schmedes SE , Patel D , Kelley J , Udhayakumar V , Talundzic E . PLoS One 2019 14 (4) e0215754
Efficacy and safety of artemether-lumefantrine for the treatment of uncomplicated malaria and prevalence of Pfk13 and Pfmdr1 polymorphisms after a decade of using artemisinin-based combination therapy in mainland Tanzania. Ishengoma DS , Mandara CI , Francis F , Talundzic E , Lucchi NW , Ngasala B , Kabanywanyi AM , Mahende MK , Kamugisha E , Kavishe RA , Muro F , Mohamed A , Mandike R , Mkude S , Chacky F , Paxton L , Greer G , Kitojo CA , Njau R , Martin T , Venkatesan M , Warsame M , Halsey ES , Udhayakumar V . Malar J 2019 18 (1) 88
Purification of Cyclospora cayetanensis oocysts obtained from human stool specimens for whole genome sequencing. Qvarnstrom Y , Wei-Pridgeon Y , Van Roey E , Park S , Srinivasamoorthy G , Nascimento FS , Moss DM , Talundzic E , Arrowood MJ . Gut Pathog 2018 10 45