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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 09, 2024. (Total: 6293 publications)
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Records 1-30 (of 39 Records)
Query Trace: Ray C[original query]
The frequency and function of nucleoprotein-specific CD8(+) T cells are critical for heterosubtypic immunity against influenza virus infection
Amoah S , Cao W , Sayedahmed EE , Wang Y , Kumar A , Mishina M , Eddins DJ , Wang WC , Burroughs M , Sheth M , Lee J , Shieh WJ , Ray SD , Bohannon CD , Ranjan P , Sharma SD , Hoehner J , Arthur RA , Gangappa S , Wakamatsu N , Johnston HR , Pohl J , Mittal SK , Sambhara S .
J Virol 2024 e0071124
Syndromic gastrointestinal panel diagnostic tests have changed our understanding of the epidemiology of yersiniosis-Foodborne Diseases Active Surveillance Network, 2010-2021
Ray LC , Payne DC , Rounds J , Trevejo RT , Wilson E , Burzlaff K , Garman KN , Lathrop S , Rissman T , Wymore K , Wozny S , Wilson S , Francois Watkins LK , Bruce BB , Weller DL .
Open Forum Infect Dis 2024 11 (6) ofae199 type
Risk of COVID-19 hospitalization and protection associated with mRNA vaccination among US adults with psychiatric disorders
Levy ME , Yang DH , Dunne MM , Miley K , Irving SA , Grannis SJ , Weber ZA , Griggs EP , Spark TL , Bassett E , Embi PJ , Gaglani M , Natarajan K , Valvi NR , Ong TC , Naleway AL , Stenehjem E , Klein NP , Link-Gelles R , DeSilva MB , Kharbanda AB , Raiyani C , Beaton MA , Dixon BE , Rao S , Dascomb K , Patel P , Mamawala M , Han J , Fadel WF , Barron MA , Grisel N , Dickerson M , Liao IC , Arndorfer J , Najdowski M , Murthy K , Ray C , Tenforde MW , Ball SW .
Influenza Other Respir Viruses 2024 18 (3) e13269 type
Genetics and genomics for the prevention and treatment of cardiovascular disease: update: a scientific statement from the American Heart Association.
Ganesh SK , Arnett DK , Assimes TL , Basson CT , Chakravarti A , Ellinor PT , Engler MB , Goldmuntz E , Herrington DM , Hershberger RE , Hong Y , Johnson JA , Kittner SJ , McDermott DA , Meschia JF , Mestroni L , O'Donnell CJ , Psaty BM , Vasan RS , Ruel M , Shen WK , Terzic A , Waldman SA .
Circulation 2013 128 (25) 2813-51
Effectiveness of the original monovalent coronavirus disease 2019 vaccines in preventing emergency department or urgent care encounters and hospitalizations among adults with disabilities: VISION Network, June 2021-September 2022
Patel P , Schrader KE , Rice CE , Rowley E , Cree RA , DeSilva MB , Embi PJ , Gaglani M , Grannis SJ , Ong TC , Stenehjem E , Naleway AL , Ball S , Natarajan K , Klein NP , Adams K , Kharbanda A , Ray C , Link-Gelles R , Tenforde MW .
Open Forum Infect Dis 2023 10 (11) ofad474 type
Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes
Carey ME , Dyson ZA , Ingle DJ , Amir A , Aworh MK , Chattaway MA , Chew KL , Crump JA , Feasey NA , Howden BP , Keddy KH , Maes M , Parry CM , Van Puyvelde S , Webb HE , Afolayan AO , Alexander AP , Anandan S , Andrews JR , Ashton PM , Basnyat B , Bavdekar A , Bogoch II , Clemens JD , da Silva KE , De A , de Ligt J , Diaz Guevara PL , Dolecek C , Dutta S , Ehlers MM , Francois Watkins L , Garrett DO , Godbole G , Gordon MA , Greenhill AR , Griffin C , Gupta M , Hendriksen RS , Heyderman RS , Hooda Y , Hormazabal JC , Ikhimiukor OO , Iqbal J , Jacob JJ , Jenkins C , Jinka DR , John J , Kang G , Kanteh A , Kapil A , Karkey A , Kariuki S , Kingsley RA , Koshy RM , Lauer AC , Levine MM , Lingegowda RK , Luby SP , Mackenzie GA , Mashe T , Msefula C , Mutreja A , Nagaraj G , Nagaraj S , Nair S , Naseri TK , Nimarota-Brown S , Njamkepo E , Okeke IN , Perumal SPB , Pollard AJ , Pragasam AK , Qadri F , Qamar FN , Rahman SIA , Rambocus SD , Rasko DA , Ray P , Robins-Browne R , Rongsen-Chandola T , Rutanga JP , Saha SK , Saha S , Saigal K , Sajib MSI , Seidman JC , Shakya J , Shamanna V , Shastri J , Shrestha R , Sia S , Sikorski MJ , Singh A , Smith AM , Tagg KA , Tamrakar D , Tanmoy AM , Thomas M , Thomas MS , Thomsen R , Thomson NR , Tupua S , Vaidya K , Valcanis M , Veeraraghavan B , Weill FX , Wright J , Dougan G , Argimón S , Keane JA , Aanensen DM , Baker S , Holt KE .
Elife 2023 12 type
The United States COVID-19 Forecast Hub dataset.
Cramer EY , Huang Y , Wang Y , Ray EL , Cornell M , Bracher J , Brennen A , Rivadeneira AJC , Gerding A , House K , Jayawardena D , Kanji AH , Khandelwal A , Le K , Mody V , Mody V , Niemi J , Stark A , Shah A , Wattanchit N , Zorn MW , Reich NG , US COVID-19 Forecast Hub Consortium , Lopez VK , Walker JW , Slayton RB , Johansson MA , Biggerstaff M .
Sci Data 2022 9 (1) 462 type
Development of treatment-decision algorithms for children evaluated for pulmonary tuberculosis: an individual participant data meta-analysis.
Gunasekera KS , Marcy O , Muñoz J , Lopez-Varela E , Sekadde MP , Franke MF , Bonnet M , Ahmed S , Amanullah F , Anwar A , Augusto O , Aurilio RB , Banu S , Batool I , Brands A , Cain KP , Carratalá-Castro L , Caws M , Click ES , Cranmer LM , García-Basteiro AL , Hesseling AC , Huynh J , Kabir S , Lecca L , Mandalakas A , Mavhunga F , Myint AA , Myo K , Nampijja D , Nicol MP , Orikiriza P , Palmer M , Sant'Anna CC , Siddiqui SA , Smith JP , Song R , Thuong Thuong NT , Ung V , van der Zalm MM , Verkuijl S , Viney K , Walters EG , Warren JL , Zar HJ , Marais BJ , Graham SM , Debray TPA , Cohen T , Seddon JA .
Lancet Child Adolesc Health 2023 7 (5) 336-346
Evaluation of an open forecasting challenge to assess skill of West Nile virus neuroinvasive disease prediction.
Holcomb KM , Mathis S , Staples JE , Fischer M , Barker CM , Beard CB , Nett RJ , Keyel AC , Marcantonio M , Childs ML , Gorris ME , Rochlin I , Hamins-Puértolas M , Ray EL , Uelmen JA , DeFelice N , Freedman AS , Hollingsworth BD , Das P , Osthus D , Humphreys JM , Nova N , Mordecai EA , Cohnstaedt LW , Kirk D , Kramer LD , Harris MJ , Kain MP , Reed EMX , Johansson MA .
Parasit Vectors 2023 16 (1) 11
Changing Diagnostic Testing Practices for Foodborne Pathogens, Foodborne Diseases Active Surveillance Network, 2012-2019.
Ray LC , Griffin PM , Wymore K , Wilson E , Hurd S , LaClair B , Wozny S , Eikmeier D , Nicholson C , Burzlaff K , Hatch J , Fankhauser M , Kubota K , Huang JY , Geissler A , Payne DC , Tack DM .
Open Forum Infect Dis 2022 9 (8) ofac344 type
Discordant results of Xpert MTB/Rif assay and BACTEC MGIT 960 liquid culture to detect Mycobacterium tuberculosis in community screening in Vietnam.
Nguyen Hai Viet, de Haas Petra, Nguyen Hoa Binh, Nguyen Nhung Viet, Cobelens Frank G J, Mirtskhulava Veriko, Finlay Alyssa, Van Nguyen Hung, Huyen Pham T T, Tiemersma Edine W. BMC infectious diseases 2022 22(1) 506 .
BMC infectious diseases 2022 22(1) 506
Collaborative Hubs: Making the Most of Predictive Epidemic Modeling.
Reich NG , Lessler J , Funk S , Viboud C , Vespignani A , Tibshirani RJ , Shea K , Schienle M , Runge MC , Rosenfeld R , Ray EL , Niehus R , Johnson HC , Johansson MA , Hochheiser H , Gardner L , Bracher J , Borchering RK , Biggerstaff M .
Am J Public Health 2022 112 (6) e1-e4 type
Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States.
Cramer EY , Ray EL , Lopez VK , Bracher J , Brennen A , Castro Rivadeneira AJ , Gerding A , Gneiting T , House KH , Huang Y , Jayawardena D , Kanji AH , Khandelwal A , Le K , Mühlemann A , Niemi J , Shah A , Stark A , Wang Y , Wattanachit N , Zorn MW , Gu Y , Jain S , Bannur N , Deva A , Kulkarni M , Merugu S , Raval A , Shingi S , Tiwari A , White J , Abernethy NF , Woody S , Dahan M , Fox S , Gaither K , Lachmann M , Meyers LA , Scott JG , Tec M , Srivastava A , George GE , Cegan JC , Dettwiller ID , England WP , Farthing MW , Hunter RH , Lafferty B , Linkov I , Mayo ML , Parno MD , Rowland MA , Trump BD , Zhang-James Y , Chen S , Faraone SV , Hess J , Morley CP , Salekin A , Wang D , Corsetti SM , Baer TM , Eisenberg MC , Falb K , Huang Y , Martin ET , McCauley E , Myers RL , Schwarz T , Sheldon D , Gibson GC , Yu R , Gao L , Ma Y , Wu D , Yan X , Jin X , Wang YX , Chen Y , Guo L , Zhao Y , Gu Q , Chen J , Wang L , Xu P , Zhang W , Zou D , Biegel H , Lega J , McConnell S , Nagraj VP , Guertin SL , Hulme-Lowe C , Turner SD , Shi Y , Ban X , Walraven R , Hong QJ , Kong S , van de Walle A , Turtle JA , Ben-Nun M , Riley S , Riley P , Koyluoglu U , DesRoches D , Forli P , Hamory B , Kyriakides C , Leis H , Milliken J , Moloney M , Morgan J , Nirgudkar N , Ozcan G , Piwonka N , Ravi M , Schrader C , Shakhnovich E , Siegel D , Spatz R , Stiefeling C , Wilkinson B , Wong A , Cavany S , España G , Moore S , Oidtman R , Perkins A , Kraus D , Kraus A , Gao Z , Bian J , Cao W , Lavista Ferres J , Li C , Liu TY , Xie X , Zhang S , Zheng S , Vespignani A , Chinazzi M , Davis JT , Mu K , Pastore YPiontti A , Xiong X , Zheng A , Baek J , Farias V , Georgescu A , Levi R , Sinha D , Wilde J , Perakis G , Bennouna MA , Nze-Ndong D , Singhvi D , Spantidakis I , Thayaparan L , Tsiourvas A , Sarker A , Jadbabaie A , Shah D , Della Penna N , Celi LA , Sundar S , Wolfinger R , Osthus D , Castro L , Fairchild G , Michaud I , Karlen D , Kinsey M , Mullany LC , Rainwater-Lovett K , Shin L , Tallaksen K , Wilson S , Lee EC , Dent J , Grantz KH , Hill AL , Kaminsky J , Kaminsky K , Keegan LT , Lauer SA , Lemaitre JC , Lessler J , Meredith HR , Perez-Saez J , Shah S , Smith CP , Truelove SA , Wills J , Marshall M , Gardner L , Nixon K , Burant JC , Wang L , Gao L , Gu Z , Kim M , Li X , Wang G , Wang Y , Yu S , Reiner RC , Barber R , Gakidou E , Hay SI , Lim S , Murray C , Pigott D , Gurung HL , Baccam P , Stage SA , Suchoski BT , Prakash BA , Adhikari B , Cui J , Rodríguez A , Tabassum A , Xie J , Keskinocak P , Asplund J , Baxter A , Oruc BE , Serban N , Arik SO , Dusenberry M , Epshteyn A , Kanal E , Le LT , Li CL , Pfister T , Sava D , Sinha R , Tsai T , Yoder N , Yoon J , Zhang L , Abbott S , Bosse NI , Funk S , Hellewell J , Meakin SR , Sherratt K , Zhou M , Kalantari R , Yamana TK , Pei S , Shaman J , Li ML , Bertsimas D , Skali Lami O , Soni S , Tazi Bouardi H , Ayer T , Adee M , Chhatwal J , Dalgic OO , Ladd MA , Linas BP , Mueller P , Xiao J , Wang Y , Wang Q , Xie S , Zeng D , Green A , Bien J , Brooks L , Hu AJ , Jahja M , McDonald D , Narasimhan B , Politsch C , Rajanala S , Rumack A , Simon N , Tibshirani RJ , Tibshirani R , Ventura V , Wasserman L , O'Dea EB , Drake JM , Pagano R , Tran QT , Ho LST , Huynh H , Walker JW , Slayton RB , Johansson MA , Biggerstaff M , Reich NG .
Proc Natl Acad Sci U S A 2022 119 (15) e2113561119
Tuberculosis screening among ambulatory people living with HIV: a systematic review and individual participant data meta-analysis.
Dhana A , Hamada Y , Kengne AP , Kerkhoff AD , Rangaka MX , Kredo T , Baddeley A , Miller C , Singh S , Hanifa Y , Grant AD , Fielding K , Affolabi D , Merle CS , Wachinou AP , Yoon C , Cattamanchi A , Hoffmann CJ , Martinson N , Mbu ET , Sander MS , Balcha TT , Skogmar S , Reeve BWP , Theron G , Ndlangalavu G , Modi S , Cavanaugh J , Swindells S , Chaisson RE , Ahmad Khan F , Howard AA , Wood R , Thit SS , Kyi MM , Hanson J , Drain PK , Shapiro AE , Kufa T , Churchyard G , Nguyen DT , Graviss EA , Bjerrum S , Johansen IS , Gersh JK , Horne DJ , LaCourse SM , Al-Darraji HAA , Kamarulzaman A , Kempker RR , Tukvadze N , Barr DA , Meintjes G , Maartens G .
Lancet Infect Dis 2021 22 (4) 507-518
Rotavirus Strain Distribution before and after Introducing Rotavirus Vaccine in India.
Varghese T , Alokit Khakha S , Giri S , Nair NP , Badur M , Gathwala G , Chaudhury S , Kaushik S , Dash M , Mohakud NK , Ray RK , Mohanty P , Kumar CPG , Venkatasubramanian S , Arora R , Raghava Mohan V , Tate JE , Parashar UD , Kang G .
Pathogens 2021 10 (4) type
Yersinia enterocolitica Outbreak Associated with Pasteurized Milk
Gruber JF , Morris S , Warren KA , Kline KE , Schroeder B , Dettinger L , Husband B , Pollard K , Davis C , Miller J , Weltman A , Mattioli M , Ray L , Tarr C , Longenberger AH .
Foodborne Pathog Dis 2021 18 (7) 448-454 type
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization.
Konopka-Anstadt Jennifer L, Campagnoli Ray, Vincent Annelet, Shaw Jing, Wei Ling, Wynn Nhien T, Smithee Shane E, Bujaki Erika, Te Yeh Ming, Laassri Majid, Zagorodnyaya Tatiana, Weiner Amy J, Chumakov Konstantin, Andino Raul, Macadam Andrew, Kew Olen, Burns Cara C. NPJ vaccines 2020 Mar 5(1) 26 .
NPJ vaccines 2020 Mar 5(1) 26
Impact of GeneXpert MTB/RIF® on treatment initiation and outcomes of RIF-resistant and RIF-susceptible TB patients in Vladimir TB dispensary, Russia.
Ershova JV , Volchenkov GV , Somova TR , Kuznetsova TA , Kaunetis NV , Kaminski D , Demikhova OV , Chernousova LN , Vasilyeva IA , Kerr EM , Cegielski JP , Kurbatova EV .
BMC Infect Dis 2020 20 (1) 543
The Global Meningitis Genome Partnership.
Rodgers E , Bentley SD , Borrow R , Bratcher HB , Brisse S , Brueggemann AB , Caugant DA , Findlow J , Fox L , Glennie L , Harrison LH , Harrison OB , Heyderman RS , van Rensburg MJ , Jolley KA , Kwambana-Adams B , Ladhani S , LaForce M , Levin M , Lucidarme J , MacAlasdair N , Maclennan J , Maiden MCJ , Maynard-Smith L , Muzzi A , Oster P , Rodrigues CMC , Serino ORL , Smith V , van der Ende A , Vazquez J , Wang X , Yezli S , Stuart JM .
J Infect 2020 81 (4) 510-520 type
Molecular characterization and three-dimensional structures of avian H8, H11, H14, H15 and swine H4 influenza virus hemagglutinins.
Yang H , Carney PJ , Chang JC , Stevens J .
Heliyon 2020 6 (6) e04068
Development of a new oral poliovirus vaccine for the eradication end game using codon deoptimization.
Konopka-Anstadt JL , Campagnoli R , Vincent A , Shaw J , Wei L , Wynn NT , Smithee SE , Bujaki E , Te Yeh M , Laassri M , Zagorodnyaya T , Weiner AJ , Chumakov K , Andino R , Macadam A , Kew O , Burns CC .
NPJ Vaccines 2020 5 (1) 26 type
Antifungal triazole posaconazole targets an early stage of the parechovirus A3 life cycle.
Rhoden E , Ng TFF , Campagnoli R , Nix WA , Konopka-Anstadt J , Selvarangan R , Briesach L , Oberste MS , Weldon WC .
Antimicrob Agents Chemother 2019 64 (3) type
Determining the molecular drivers of species-specific interferon-stimulated gene product 15 interactions with nairovirus ovarian tumor domain proteases.
Dzimianski JV , Scholte FEM , Williams IL , Langley C , Freitas BT , Spengler JR , Bergeron E , Pegan SD .
PLoS One 2019 14 (12) e0226415
An open challenge to advance probabilistic forecasting for dengue epidemics.
Johansson MA , Apfeldorf KM , Dobson S , Devita J , Buczak AL , Baugher B , Moniz LJ , Bagley T , Babin SM , Guven E , Yamana TK , Shaman J , Moschou T , Lothian N , Lane A , Osborne G , Jiang G , Brooks LC , Farrow DC , Hyun S , Tibshirani RJ , Rosenfeld R , Lessler J , Reich NG , Cummings DAT , Lauer SA , Moore SM , Clapham HE , Lowe R , Bailey TC , Garcia-Diez M , Carvalho MS , Rodo X , Sardar T , Paul R , Ray EL , Sakrejda K , Brown AC , Meng X , Osoba O , Vardavas R , Manheim D , Moore M , Rao DM , Porco TC , Ackley S , Liu F , Worden L , Convertino M , Liu Y , Reddy A , Ortiz E , Rivero J , Brito H , Juarrero A , Johnson LR , Gramacy RB , Cohen JM , Mordecai EA , Murdock CC , Rohr JR , Ryan SJ , Stewart-Ibarra AM , Weikel DP , Jutla A , Khan R , Poultney M , Colwell RR , Rivera-Garcia B , Barker CM , Bell JE , Biggerstaff M , Swerdlow D , Mier YTeran-Romero L , Forshey BM , Trtanj J , Asher J , Clay M , Margolis HS , Hebbeler AM , George D , Chretien JP .
Proc Natl Acad Sci U S A 2019 116 (48) 24268-24274 type
Genetic Meningococcal Antigen Typing System (gMATS): A genotyping tool that predicts 4CMenB strain coverage worldwide.
Muzzi A , Brozzi A , Serino L , Bodini M , Abad R , Caugant D , Comanducci M , Lemos AP , Gorla MC , Krizova P , Mikula C , Mulhall R , Nissen M , Nohynek H , Simoes MJ , Skoczynska A , Stefanelli P , Taha MK , Toropainen M , Tzanakaki G , Vadivelu-Pechai K , Watson P , Vazquez JA , Rajam G , Rappuoli R , Borrow R , Medini D .
Vaccine 2019 37 (7) 991-1000
Probing the impact of nairovirus genomic diversity on viral ovarian tumor domain protease (vOTU) structure and deubiquitinase activity.
Dzimianski JV , Beldon BS , Daczkowski CM , Goodwin OY , Scholte FEM , Bergeron E , Pegan SD .
PLoS Pathog 2019 15 (1) e1007515
Invasive Methicillin-Resistant Staphylococcus aureus USA500 Strains from the U.S. Emerging Infections Program Constitute Three Geographically Distinct Lineages.
Frisch MB , Castillo-Ramirez S , Petit RA3rd , Farley MM , Ray SM , Albrecht VS , Limbago BM , Hernandez J , See I , Satola SW , Read TD .
mSphere 2018 3 (3)
Biochemical and Structural Insights into the Preference of Nairoviral DeISGylases for Interferon-Stimulated Gene Product 15 Originating from Certain Species.
Deaton MK , Dzimianski JV , Daczkowski CM , Whitney GK , Mank NJ , Parham MM , Bergeron E , Pegan SD .
J Virol 2016 90 (18) 8314-27
Identification of a novel pathogenic Borrelia species causing Lyme borreliosis with unusually high spirochaetaemia: a descriptive study.
Pritt BS , Mead PS , Johnson DK , Neitzel DF , Respicio-Kingry LB , Davis JP , Schiffman E , Sloan LM , Schriefer ME , Replogle AJ , Paskewitz SM , Ray JA , Bjork J , Steward CR , Deedon A , Lee X , Kingry LC , Miller TK , Feist MA , Theel ES , Patel R , Irish CL , Petersen JM .
Lancet Infect Dis 2016 16 (5) 556-564 type
Characteristics of adults in the hepatitis B research network in North America reflect their country of origin and hepatitis B virus genotype.
Ghany M , Perrillo R , Li R , Belle SH , Janssen HL , Terrault NA , Shuhart MC , Lau DT , Kim WR , Fried MW , Sterling RK , Di Bisceglie AM , Han SH , Ganova-Raeva LM , Chang KM , Suk-Fong Lok A .
Clin Gastroenterol Hepatol 2014 13 (1) 183-92
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