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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)
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Records 1-30 (of 77 Records)
Query Trace: Philip C[original query]
Selective Whole-Genome Amplification as a Tool to Enrich Specimens with Low Treponema pallidum Genomic DNA Copies for Whole-Genome Sequencing.
Thurlow CM , Joseph SJ , Ganova-Raeva L , Katz SS , Pereira L , Chen C , Debra A , Vilfort K , Workowski K , Cohen SE , Reno H , Sun Y , Burroughs M , Sheth M , Chi KH , Danavall D , Philip SS , Cao W , Kersh EN , Pillay A .
mSphere 2022 7 (3) e0000922
Contact tracing outcomes among household contacts of fully vaccinated COVID-19 patients - San Francisco, California, January 29-July 2, 2021.
Sachdev DD , ChewNg R , Sankaran M , Ernst A , Hernandez KT , Servellita V , Sotomayor-Gonzalez A , Stoltey J , Cohen SE , Nguyen TQ , Chiu C , Philip S .
Clin Infect Dis 2021 75 (1) e267-e275 type
The CDC HIV Outbreak Coordination Unit: Developing a Standardized, Collaborative Approach to HIV Outbreak Assessment and Response.
Oster AM , France AM , McClung RP , Buchacz K , Lyss SB , Peters PJ , Weidle PJ , Switzer WM , Phillip SAJr , Brooks JT , Hernandez AL .
Public Health Rep 2021 137 (4) 333549211018678
Neurologic Involvement in Children and Adolescents Hospitalized in the United States for COVID-19 or Multisystem Inflammatory Syndrome.
LaRovere KL , Riggs BJ , Poussaint TY , Young CC , Newhams MM , Maamari M , Walker TC , Singh AR , Dapul H , Hobbs CV , McLaughlin GE , Son MBF , Maddux AB , Clouser KN , Rowan CM , McGuire JK , Fitzgerald JC , Gertz SJ , Shein SL , Munoz AC , Thomas NJ , Irby K , Levy ER , Staat MA , Tenforde MW , Feldstein LR , Halasa NB , Giuliano JS Jr , Hall MW , Kong M , Carroll CL , Schuster JE , Doymaz S , Loftis LL , Tarquinio KM , Babbitt CJ , Nofziger RA , Kleinman LC , Keenaghan MA , Cvijanovich NZ , Spinella PC , Hume JR , Wellnitz K , Mack EH , Michelson KN , Flori HR , Patel MM , Randolph AG .
JAMA Neurol 2021 78 (5) 536-547 type
Reactive astrocyte nomenclature, definitions, and future directions.
Escartin C , Galea E , Lakatos A , O'Callaghan JP , Petzold GC , Serrano-Pozo A , Steinhuser C , Volterra A , Carmignoto G , Agarwal A , Allen NJ , Araque A , Barbeito L , Barzilai A , Bergles DE , Bonvento G , Butt AM , Chen WT , Cohen-Salmon M , Cunningham C , Deneen B , DeStrooper B , Daz-Castro B , Farina C , Freeman M , Gallo V , Goldman JE , Goldman SA , Gtz M , Gutirrez A , Haydon PG , Heiland DH , Hol EM , Holt MG , Iino M , Kastanenka KV , Kettenmann H , Khakh BS , Koizumi S , Lee CJ , Liddelow SA , MacVicar BA , Magistretti P , Messing A , Mishra A , Molofsky AV , Murai KK , Norris CM , Okada S , Oliet SHR , Oliveira JF , Panatier A , Parpura V , Pekna M , Pekny M , Pellerin L , Perea G , Prez-Nievas BG , Pfrieger FW , Poskanzer KE , Quintana FJ , Ransohoff RM , Riquelme-Perez M , Robel S , Rose CR , Rothstein JD , Rouach N , Rowitch DH , Semyanov A , Sirko S , Sontheimer H , Swanson RA , Vitorica J , Wanner IB , Wood LB , Wu J , Zheng B , Zimmer ER , Zorec R , Sofroniew MV , Verkhratsky A .
Nat Neurosci 2021 24 (3) 312-325
Hepatitis C virus infection and polysubstance use among young adult people who inject drugs in a rural county of New Mexico.
Wagner K , Zhong Y , Teshale E , White K , Winstanley EL , Hettema J , Thornton K , Bisztray B , Fiuty P , Page K .
Drug Alcohol Depend 2021 220 108527
Timely Intervention and Control of a Novel Coronavirus (COVID-19) Outbreak at a Large Skilled Nursing Facility - San Francisco, California, 2020.
Karmarkar E , Blanco I , Amornkul P , DuBois A , Deng X , Moonan PK , Rubenstein BL , Miller DA , Kennedy I , Yu J , Dauterman J , Ongpin M , Hathaway W , Hoo L , Trammell S , Ememu E , Yu G , Khwaja Z , Lu W , Talai N , Jain S , Louie J , Philip S , Federman S , Masinde G , Wadford DA , Bobba N , Stoltey J , Smith A , Epson E , Chiu C , Bennett A , Vasquez AM , Williams T .
Infect Control Hosp Epidemiol 2020 42 (10) 1-20 type
Identifying septic pollution exposure routes during a waterborne norovirus outbreak - A new application for human-associated microbial source tracking qPCR.
Mattioli MC , Benedict KM , Murphy J , Kahler A , Kline KE , Longenberger A , Mitchell PK , Watkins S , Berger P , Shanks OC , Barrett CE , Barclay L , Hall AJ , Hill V , Weltman A .
J Microbiol Methods 2020 180 106091
Risk Assessment and Management of COVID-19 Among Travelers Arriving at Designated U.S. Airports, January 17-September 13, 2020.
Dollard P , Griffin I , Berro A , Cohen NJ , Singler K , Haber Y , delaMotteHurst C , Stolp A , Atti S , Hausman L , Shockey CE , Roohi S , Brown CM , Rotz LD , Cetron MS , Alvarado-Ramy F .
MMWR Morb Mortal Wkly Rep 2020 69 (45) 1681-1685 type
Africa Centres for Disease Control and Prevention Is Closing Gaps in Disease Detection.
Varma J , Maeda J , Magafu Mgmd , Onyebujoh PC .
Health Secur 2020 18 (6) 483-488
Association Between Social Vulnerability and a County's Risk for Becoming a COVID-19 Hotspot - United States, June 1-July 25, 2020.
Dasgupta S , Bowen VB , Leidner A , Fletcher K , Musial T , Rose C , Cha A , Kang G , Dirlikov E , Pevzner E , Rose D , Ritchey MD , Villanueva J , Philip C , Liburd L , Oster AM .
MMWR Morb Mortal Wkly Rep 2020 69 (42) 1535-1541 type
Cryptic transmission of SARS-CoV-2 in Washington state.
Bedford T , Greninger AL , Roychoudhury P , Starita LM , Famulare M , Huang ML , Nalla A , Pepper G , Reinhardt A , Xie H , Shrestha L , Nguyen TN , Adler A , Brandstetter E , Cho S , Giroux D , Han PD , Fay K , Frazar CD , Ilcisin M , Lacombe K , Lee J , Kiavand A , Richardson M , Sibley TR , Truong M , Wolf CR , Nickerson DA , Rieder MJ , Englund JA , Hadfield J , Hodcroft EB , Huddleston J , Moncla LH , Mller NF , Neher RA , Deng X , Gu W , Federman S , Chiu C , Duchin JS , Gautom R , Melly G , Hiatt B , Dykema P , Lindquist S , Queen K , Tao Y , Uehara A , Tong S , MacCannell D , Armstrong GL , Baird GS , Chu HY , Shendure J , Jerome KR .
Science 2020 370 (6516) 571-575 type
The impact of antimalarial resistance on the genetic structure of Plasmodium falciparum in the DRC.
Verity R , Aydemir O , Brazeau NF , Watson OJ , Hathaway NJ , Mwandagalirwa MK , Marsh PW , Thwai K , Fulton T , Denton M , Morgan AP , Parr JB , Tumwebaze PK , Conrad M , Rosenthal PJ , Ishengoma DS , Ngondi J , Gutman J , Mulenga M , Norris DE , Moss WJ , Mensah BA , Myers-Hansen JL , Ghansah A , Tshefu AK , Ghani AC , Meshnick SR , Bailey JA , Juliano JJ .
Nat Commun 2020 11 (1) 2107
Analysis of the reiteration regions (R1 to R5) of varicella-zoster virus.
Jensen NJ , Depledge DP , Ng TFF , Leung J , Quinlivan M , Radford KW , Folster J , Tseng HF , LaRussa P , Jacobsen SJ , Breuer J , Schmid DS .
Virology 2020 546 38-50
Using an Established Outbreak Response Plan and Molecular Epidemiology Methods in an HIV Transmission Cluster Investigation, Tennessee, January-June 2017.
Sizemore L , Fill MM , Mathieson SA , Black J , Brantley M , Cooper K , Garrett J , Switzer WM , Peters PJ , Wester C .
Public Health Rep 2020 135 (3) 33354920915445
Phylodynamic Analysis Complements Partner Services by Identifying Acute and Unreported HIV Transmission.
Campbell EM , Patala A , Shankar A , Li JF , Johnson JA , Westheimer E , Gay CL , Cohen SE , Switzer WM , Peters PJ .
Viruses 2020 12 (2)
Successful isolation of Treponema pallidum strains from patients' cryopreserved ulcer exudate using the rabbit model.
Pereira LE , Katz SS , Sun Y , Mills P , Taylor W , Atkins P , Thurlow CM , Chi KH , Danavall D , Cook N , Ahmed T , Debra A , Philip S , Cohen S , Workowski KA , Kersh E , Fakile Y , Chen CY , Pillay A .
PLoS One 2020 15 (1) e0227769
Opioid Use Fueling HIV Transmission in an Urban Setting: An Outbreak of HIV Infection Among People Who Inject Drugs-Massachusetts, 2015-2018.
Alpren C , Dawson EL , John B , Cranston K , Panneer N , Fukuda HD , Roosevelt K , Klevens RM , Bryant J , Peters PJ , Lyss SB , Switzer W , Burrage A , Murray A , Agnew-Brune C , Stiles T , McClung P , Campbell EM , Breen C , Randall LM , Dasgupta S , Onofrey S , Bixler D , Hampton K , Jaeger JL , Hsu KK , Adih W , Callis B , Goldman LR , Danner SP , Jia H , Tumpney M , Board A , Brown C , DeMaria A Jr , Buchacz K .
Am J Public Health 2019 110 (1) e1-e8
HIV-1 genetic diversity to estimate time of infection and infer adherence to preexposure prophylaxis.
Council Olivia D, Ruone Susan, Mock Philip A, Khalil George, Martin Amy, Curlin Marcel E, McNicholl Janet M, Heneine Walid, Leelawiwat Wanna, Choopanya Kachit, Vanichseni Suphak, Cherdtrakulkiat Thitima, Anekvorapong Rapeepan, Martin Michael, García-Lerma José Gerardo.AIDS (London, England) 2019 Dec (15) 2299-2307 .
AIDS (London, England) 2019 Dec (15) 2299-2307
Genome-wide association studies of structural birth defects: A review and commentary.
Lupo PJ , Mitchell LE , Jenkins MM .
Birth Defects Res 2019 111 (18) 1329-1342
HIV-1 genetic diversity to estimate time of infection and infer adherence to pre-exposure prophylaxis.
Council OD , Ruone S , Mock PA , Khalil G , Martin A , Curlin ME , McNicholl JM , Heneine W , Leelawiwat W , Choopanya K , Vanichseni S , Cherdtrakulkiat T , Anekvorapong R , Martin M , Garcia-Lerma JG .
AIDS 2019 33 (15) 2299-2307
Rapid Identification and Investigation of an HIV Risk Network Among People Who Inject Drugs -Miami, FL, 2018.
Tookes H , Bartholomew TS , Geary S , Matthias J , Poschman K , Blackmore C , Philip C , Suarez E , Forrest DW , Rodriguez AE , Kolber MA , Knaul F , Colucci L , Spencer E .
AIDS Behav 2019 24 (1) 246-256
Exome sequencing of family trios from the National Birth Defects Prevention Study: Tapping into a rich resource of genetic and environmental data.
Jenkins MM , Almli LM , Pangilinan F , Chong JX , Blue EE , Shapira SK , White J , McGoldrick D , Smith JD , Mullikin JC , Bean CJ , Nembhard WN , Lou XY , Shaw GM , Romitti PA , Keppler-Noreuil K , Yazdy MM , Kay DM , Carter TC , Olshan AF , Moore KJ , Nascone-Yoder N , Finnell RH , Lupo PJ , Feldkamp ML , Nickerson DA , Bamshad MJ , Brody LC , Reefhuis J .
Birth Defects Res 2019 111 (20) 1618-1632
Increased discrimination of Treponema pallidum strains by subtyping with a four-component system incorporating a mononucleotide tandem repeat in rspA.
Pillay A , Lee MK , Slezak T , Katz SS , Sun Y , Chi KH , Morshed M , Philip S , Ballard RC , Chen CY .
Sex Transm Dis 2019 46 (4) e42-e45
Hepatitis C virus infection among people who inject drugs in Bangkok, Thailand, 2005-2010.
Martin M , Vanichseni S , Leelawiwat W , Anekvorapong R , Raengsakulrach B , Cherdtrakulkiat T , Sangkum U , Mock PA , Leethochawalit M , Chiamwongpaet S , McNicholl JM , Kittimunkong S , Curlin ME , Choopanya K .
WHO South East Asia J Public Health 2019 8 (1) 50-55
Genetic Meningococcal Antigen Typing System (gMATS): A genotyping tool that predicts 4CMenB strain coverage worldwide.
Muzzi A , Brozzi A , Serino L , Bodini M , Abad R , Caugant D , Comanducci M , Lemos AP , Gorla MC , Krizova P , Mikula C , Mulhall R , Nissen M , Nohynek H , Simoes MJ , Skoczynska A , Stefanelli P , Taha MK , Toropainen M , Tzanakaki G , Vadivelu-Pechai K , Watson P , Vazquez JA , Rajam G , Rappuoli R , Borrow R , Medini D .
Vaccine 2019 37 (7) 991-1000
A large HCV transmission network enabled a fast-growing HIV outbreak in rural Indiana, 2015.
Ramachandran S , Thai H , Forbi JC , Galang RR , Dimitrova Z , Xia GL , Lin Y , Punkova LT , Pontones PR , Gentry J , Blosser SJ , Lovchik J , Switzer WM , Teshale E , Peters P , Ward J , Khudyakov Y .
EBioMedicine 2018 37 374-381
Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.
, Allix-Béguec Caroline, Arandjelovic Irena, Bi Lijun, Beckert Patrick, Bonnet Maryline, Bradley Phelim, Cabibbe Andrea M, Cancino-Muñoz Irving, Caulfield Mark J, Chaiprasert Angkana, Cirillo Daniela M, Clifton David A, Comas Iñaki, Crook Derrick W, De Filippo Maria R, de Neeling Han, Diel Roland, Drobniewski Francis A, Faksri Kiatichai, Farhat Maha R, Fleming Joy, Fowler Philip, Fowler Tom A, Gao Qian, Gardy Jennifer, Gascoyne-Binzi Deborah, Gibertoni-Cruz Ana-Luiza, Gil-Brusola Ana, Golubchik Tanya, Gonzalo Ximena, Grandjean Louis, He Guangxue, Guthrie Jennifer L, Hoosdally Sarah, Hunt Martin, Iqbal Zamin, Ismail Nazir, Johnston James, Khanzada Faisal M, Khor Chiea C, Kohl Thomas A, Kong Clare, Lipworth Sam, Liu Qingyun, Maphalala Gugu, Martinez Elena, Mathys Vanessa, Merker Matthias, Miotto Paolo, Mistry Nerges, Moore David A J, Murray Megan, Niemann Stefan, Omar Shaheed V, Ong Rick T-H, Peto Tim E A, Posey James E, Prammananan Therdsak, Pym Alexander, Rodrigues Camilla, Rodrigues Mabel, Rodwell Timothy, Rossolini Gian M, Sánchez Padilla Elisabeth, Schito Marco, Shen Xin, Shendure Jay, Sintchenko Vitali, Sloutsky Alex, Smith E Grace, Snyder Matthew, Soetaert Karine, Starks Angela M, Supply Philip, Suriyapol Prapat, Tahseen Sabira, Tang Patrick, Teo Yik-Ying, Thuong Thuong N T, Thwaites Guy, Tortoli Enrico, van Soolingen Dick, Walker A Sarah, Walker Timothy M, Wilcox Mark, Wilson Daniel J, Wyllie David, Yang Yang, Zhang Hongtai, Zhao Yanlin, Zhu Baoli. The New England journal of medicine 2018 379(15) 1403-1415 .
The New England journal of medicine 2018 379(15) 1403-1415
Molecular assays for antimalarial drug resistance surveillance: A target product profile.
Nsanzabana C , Ariey F , Beck HP , Ding XC , Kamau E , Krishna S , Legrand E , Lucchi N , Miotto O , Nag S , Noedl H , Roper C , Rosenthal PJ , Schallig Hdfh , Taylor SM , Volkman SK , Gonzalez IJ .
PLoS One 2018 13 (9) e0204347
Survey of diagnostic testing for respiratory syncytial virus (RSV) in adults: Infectious disease physician practices and implications for burden estimates.
Allen KE , Beekmann SE , Polgreen P , Poser S , StPierre J , Santibanez S , Gerber SI , Kim L .
Diagn Microbiol Infect Dis 2017 92 (3) 206-209
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