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CDC-Authored Genomics and Precision Health Publications Database|Home|Public Health Genomics and Precision Health Knowledge Base (PHGKB)

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Sep 16, 2024. (Total: 6309 publications)
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Records 1-30 (of 45 Records)
Query Trace: Pham H[original query]
Who gets sick from COVID-19? Sociodemographic correlates of severe adult health outcomes during Alpha- and Delta-variant predominant periods, 9/2020-11/2021
Wei SC , Freeman D , Himschoot A , Clarke KEN , Van Dyke ME , Adjemian J , Ahmad FB , Benoit TJ , Berney K , Gundlapalli AV , Hall AJ , Havers F , Henley SJ , Hilton C , Johns D , Opsomer JD , Pham HT , Stuckey MJ , Taylor CA , Jones JM .
J Infect Dis 2024 229 (1) 122-132
Genetic diversity of G9, G3, G8 and G1 rotavirus group A strains circulating among children with acute gastroenteritis in Vietnam from 2016 to 2021
Le LKT , Chu MNT , Tate JE , Jiang B , Bowen MD , Esona MD , Gautam R , Jaimes J , Pham TPT , Nguyen HT , Anh DD , Trang NV , Parashar U .
Infect Genet Evol 2024 105566 type
Detection of fungal DNA in human body fluids and tissues during a multistate outbreak of fungal meningitis and other infections.
Gade L , Scheel CM , Pham CD , Lindsley MD , Iqbal N , Cleveland AA , Whitney AM , Lockhart SR , Brandt ME , Litvintseva AP .
Eukaryot Cell 2013 12 (5) 677-83
Novel strain of multidrug non-susceptible Neisseria gonorrhoeae in the USA
Reimche JL , Pham CD , Joseph SJ , Hutton S , Cartee JC , Ruan Y , Breaux M , Ivanof C , Joshi A , DeMartino M , Kirby JE , Barbee LA , Kersh EN , Roosevelt KA , Hsu KK .
Lancet Infect Dis 2024 type
Genomic and phenotypic characterization of shiga toxin-producing Escherichia albertii strains isolated from wild birds in a major agricultural region in California
Carter MQ , Quiñones B , He X , Pham A , Carychao D , Cooley MB , Lo CC , Chain PSG , Lindsey RL , Bono JL .
Microorganisms 2023 11 (11) type
Genomic analysis of 1710 surveillance-based Neisseria gonorrhoeae isolates from the USA in 2019 identifies predominant strain types and chromosomal antimicrobial-resistance determinants
Reimche JL , Clemons AA , Chivukula VL , Joseph SJ , Schmerer MW , Pham CD , Schlanger K , St Cyr SB , Kersh EN , Gernert KM .
Microb Genom 2023 9 (5)
COVID-19-Associated Hospitalizations Among U.S. Infants Aged <6 Months - COVID-NET, 13 States, June 2021-August 2022.
Hamid Sarah, Woodworth Kate, Pham Huong, Milucky Jennifer, Chai Shua J, Kawasaki Breanna, Yousey-Hindes Kimberly, Anderson Evan J, Henderson Justin, Lynfield Ruth, Pacheco Francesca, Barney Grant, Bennett Nancy M, Shiltz Eli, Sutton Melissa, Talbot H Keipp, Price Andrea, Havers Fiona P, Taylor Christopher A, . MMWR. Morbidity and mortality weekly report 2022 71(45) 1442-1448 .
MMWR. Morbidity and mortality weekly report 2022 71(45) 1442-1448
COVID-19-Associated Hospitalizations Among Vaccinated and Unvaccinated Adults 18 Years or Older in 13 US States, January 2021 to April 2022.
Havers FP , Pham H , Taylor CA , Whitaker M , Patel K , Anglin O , Kambhampati AK , Milucky J , Zell E , Moline HL , Chai SJ , Kirley PD , Alden NB , Armistead I , Yousey-Hindes K , Meek J , Openo KP , Anderson EJ , Reeg L , Kohrman A , Lynfield R , Como-Sabetti K , Davis EM , Cline C , Muse A , Barney G , Bushey S , Felsen CB , Billing LM , Shiltz E , Sutton M , Abdullah N , Talbot HK , Schaffner W , Hill M , George A , Hall AJ , Bialek SR , Murthy NC , Murthy BP , McMorrow M .
JAMA Intern Med 2022 182 (10) 1071-1081
Phylogenomic Comparison of Neisseria gonorrhoeae Causing Disseminated Gonococcal Infections and Uncomplicated Gonorrhea in Georgia, United States.
Cartee JC , Joseph SJ , Weston E , Pham CD , Thomas JCth , Schlanger K , St Cyr SB , Farley MM , Moore AE , Tunali AK , Cloud C , Raphael BH .
Open Forum Infect Dis 2022 9 (7) ofac247 type
Discordant results of Xpert MTB/Rif assay and BACTEC MGIT 960 liquid culture to detect Mycobacterium tuberculosis in community screening in Vietnam.
Nguyen Hai Viet, de Haas Petra, Nguyen Hoa Binh, Nguyen Nhung Viet, Cobelens Frank G J, Mirtskhulava Veriko, Finlay Alyssa, Van Nguyen Hung, Huyen Pham T T, Tiemersma Edine W. BMC infectious diseases 2022 22(1) 506 .
BMC infectious diseases 2022 22(1) 506
Characterization of a Neisseria gonorrhoeae Ciprofloxacin panel for an antimicrobial resistant Isolate Bank.
Liu H , Tang K , Pham CD , Schmerer M , Kersh EN , Raphael BH .
PLoS One 2022 17 (3) e0264149 type
Rubella Virus Infected Macrophages and Neutrophils Define Patterns of Granulomatous Inflammation in Inborn and Acquired Errors of Immunity.
Perelygina L , Faisthalab R , Abernathy E , Chen MH , Hao L , Bercovitch L , Bayer DK , Noroski LM , Lam MT , Cicalese MP , Al-Herz W , Nanda A , Hajjar J , Vanden Driessche K , Schroven S , Leysen J , Rosenbach M , Peters P , Raedler J , Albert MH , Abraham RS , Rangarjan HG , Buchbinder D , Kobrynski L , Pham-Huy A , Dhossche J , Cunningham Rundles C , Meyer AK , Theos A , Atkinson TP , Musiek A , Adeli M , Derichs U , Walz C , Krüger R , von Bernuth H , Klein C , Icenogle J , Hauck F , Sullivan KE .
Front Immunol 2021 12 796065
The genomic epidemiology of multi-drug resistant invasive non-typhoidal Salmonella in selected sub-Saharan African countries.
Park SE , Pham DT , Pak GD , Panzner U , Maria Cruz Espinoza L , von Kalckreuth V , Im J , Mogeni OD , Schütt-Gerowitt H , Crump JA , Breiman RF , Adu-Sarkodie Y , Owusu-Dabo E , Rakotozandrindrainy R , Bassiahi Soura A , Aseffa A , Gasmelseed N , Sooka A , Keddy KH , May J , Aaby P , Biggs HM , Hertz JT , Montgomery JM , Cosmas L , Olack B , Fields B , Sarpong N , Razafindrabe TJL , Raminosoa TM , Kabore LP , Sampo E , Teferi M , Yeshitela B , El Tayeb MA , Krumkamp R , Dekker DM , Jaeger A , Tall A , Gassama A , Niang A , Bjerregaard-Andersen M , Løfberg SV , Deerin JF , Park JK , Konings F , Carey ME , Van Puyvelde S , Ali M , Clemens J , Dougan G , Baker S , Marks F .
BMJ Glob Health 2021 6 (8) type
Phylogenomic analysis reveals persistence of gonococcal strains with reduced-susceptibility to extended-spectrum cephalosporins and mosaic penA-34.
Thomas 4th JC , Joseph SJ , Cartee JC , Pham CD , Schmerer MW , Schlanger K , St Cyr SB , Kersh EN , Raphael BH .
Nat Commun 2021 12 (1) 3801 type
Genomic analysis of the predominant strains and antimicrobial resistance determinants within 1479 Neisseria gonorrhoeae isolates from the U.S. Gonococcal Isolate Surveillance Project in 2018.
Reimche JL , Chivukula VL , Schmerer MW , Joseph SJ , Pham CD , Schlanger K , St Cyr SB , Weinstock HS , Raphael BH , Kersh EN , Gernert KM .
Sex Transm Dis 2021 48 S78-S87 type
Human infection with an unknown species of Dracunculus in Vietnam.
Thach PN , van Doorn HR , Bishop HS , Fox MS , Sapp SGH , Cama VA , Van Duyet L .
Int J Infect Dis 2021 105 739-742
Sustained Transmission of Neisseria gonorrhoeae with High-Level Resistance to Azithromycin, Indianapolis, Indiana 2017-2018.
Holderman JL , Thomas JC , Schlanger K , Black JM , Town K , Cyr SB , Pham CD , Kirkcaldy RD .
Clin Infect Dis 2021 73 (5) 808-815
Sustained Transmission of Neisseria gonorrhoeae with High-Level Resistance to Azithromycin, in Indianapolis, Indiana, 2017-2018.
Holderman JL , Thomas JC , Schlanger K , Black JM , Town K , Cyr SB , Pham CD , Kirkcaldy RD .
Clin Infect Dis 2021 73 (5) 808-815 type
Atypical Mutation in Neisseria gonorrhoeae 23S rRNA Associated with High-Level Azithromycin Resistance.
Pham CD , Nash E , Liu H , Schmerer MW , Sharpe S , Woods G , Roland B , Schlanger K , St Cyr SB , Carlson J , Sellers K , Olsen A , Sanon R , Hardin H , Soge OO , Raphael BH , Kersh EN .
Antimicrob Agents Chemother 2020 65 (2) type
Characterization of Reference Materials for Spinal Muscular Atrophy Genetic Testing: A GeT-RM Collaborative Project.
Prior TW , Bayrak-Toydemir P , Lynnes TC , Mao R , Metcalf JD , Muralidharan K , Iwata-Otsubo A , Pham HT , Pratt VM , Qureshi S , Requesens D , Shen J , Vetrini F , Kalman L .
J Mol Diagn 2020 23 (1) 103-110
Azithromycin susceptibility of Neisseria gonorrhoeae in the USA in 2017: a genomic analysis of surveillance data.
Gernert KM , Seby S , Schmerer MW , Thomas JCth , Pham CD , Cyr SS , Schlanger K , Weinstock H , Shafer WM , Raphael BH , Kersh EN .
Lancet Microbe 2020 1 (4) e154-e164 type
A Culture Collection of 50 Neisseria gonorrhoeae Isolates.
Liu H , Vidyaprakash E , Schmerer MW , Pham DC , St Cyr S , Kersh EN .
Microbiol Resour Announc 2020 9 (40)
Genetically and antigenically divergent influenza A(H9N2) viruses exhibit differential replication and transmission phenotypes in mammalian models.
Belser JA , Sun X , Brock N , Pappas C , Pulit-Penaloza JA , Zeng H , Jang Y , Jones J , Carney PJ , Chang J , Van Long N , Diep NT , Thor S , Di H , Yang G , Cook PW , Creager HM , Wang D , McFarland J , Van Dong P , Wentworth DE , Tumpey TM , Barnes JR , Stevens J , Davis CT , Maines TR .
J Virol 2020 94 (17)
Genomic characterization of Neisseria gonorrhoeae Strains from 2016 United States Sentinel Surveillance Displaying Reduced Susceptibility to Azithromycin.
Schmerer MW , Abrams AJ , Seby S , Thomas JC4th , Cartee J , Lucking S , Vidyaprakash E , Pham CD , Sharpe S , Pettus K , St Cyr SB , Torrone EA , Kersh EN , Gernert KM .
Antimicrob Agents Chemother 2020 64 (5) type
Expanding US Laboratory Capacity for Neisseria gonorrhoeae Antimicrobial Susceptibility Testing and Whole Genome Sequencing through CDC's Antibiotic Resistance Laboratory Network.
Kersh EN , Pham CD , Papp JR , Myers R , Steece R , Kubin G , Gautom R , Nash EE , Sharpe S , Gernert KM , Schmerer M , Raphael BH , Henning T , Gaynor AM , Soge O , Schlanger K , Kirkcaldy RD , St Cyr SB , Torrone EA , Bernstein K , Weinstock H .
J Clin Microbiol 2020 58 (4) type
Emergence of Neisseria gonorrhoeae Strains Harboring a Novel Combination of Azithromycin-Attenuating Mutations.
Pham CD , Sharpe S , Schlanger K , St Cyr S , Holderman J , Steece R , Soge OO , Masinde G , Arno J , Schmerer M , Kersh EN .
Antimicrob Agents Chemother 2019 63 (4) type
Evidence of Recent Genomic Evolution in Gonococcal Strains with Decreased Susceptibility to Cephalosporins or Azithromycin in the United States, 2014-2016.
Thomas JC , Seby S , Abrams AJ , Cartee J , Lucking S , Vidyaprakash E , Schmerer M , Pham CD , Hong J , Torrone E , St Cyr S , Shafer WM , Bernstein K , Kersh EN , Gernert KM .
J Infect Dis 2019 220 (2) 294-305 type
The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa.
Park SE , Pham DT , Boinett C , Wong VK , Pak GD , Panzner U , Espinoza LMC , von Kalckreuth V , Im J , Schutt-Gerowitt H , Crump JA , Breiman RF , Adu-Sarkodie Y , Owusu-Dabo E , Rakotozandrindrainy R , Soura AB , Aseffa A , Gasmelseed N , Keddy KH , May J , Sow AG , Aaby P , Biggs HM , Hertz JT , Montgomery JM , Cosmas L , Fields B , Sarpong N , Razafindrabe TJL , Raminosoa TM , Kabore LP , Sampo E , Teferi M , Yeshitela B , El Tayeb MA , Sooka A , Meyer CG , Krumkamp R , Dekker DM , Jaeger A , Poppert S , Tall A , Niang A , Bjerregaard-Andersen M , Valborg Løfberg S , Seo HJ , Jeon HJ , Deerin JF , Park J , Konings F , Ali M , Clemens JD , Hughes P , Sendagala JN , Vudriko T , Downing R , Ikumapayi UN , Mackenzie GA , Obaro S , Argimon S , Aanensen DM , Page A , Keane JA , Duchene S , Dyson Z , Holt KE , Dougan G , Marks F , Baker S .
Nat Commun 2018 9 (1) 5094 type
Mechanistic Basis for Decreased Antimicrobial Susceptibility in a Clinical Isolate of Neisseria gonorrhoeae Possessing a Mosaic-Like mtr Efflux Pump Locus.
Rouquette-Loughlin CE , Reimche JL , Balthazar JT , Dhulipala V , Gernert KM , Kersh EN , Pham CD , Pettus K , Abrams AJ , Trees DL , St Cyr S , Shafer WM .
mBio 2018 9 (6) type
Zoonotic origin and transmission of Middle East respiratory syndrome coronavirus in the UAE.
Paden CR , Yusof MFBM , Al Hammadi ZM , Queen K , Tao Y , Eltahir YM , Elsayed EA , Marzoug BA , Bensalah OKA , Khalafalla AI , Al Mulla M , Elkheir KA , Issa ZB , Pradeep K , Elsaleh FN , Imambaccus H , Sasse J , Weber S , Shi M , Zhang J , Li Y , Pham H , Kim L , Hall AJ , Gerber SI , Al Hosani FI , Tong S , Al Muhairi SSM .
Zoonoses Public Health 2017 65 (3) 322-333 type
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