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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 04, 2023. (Total: 4781 publications since 2011)
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Records 1-30 (of 53 Records)
Query Trace: Mathew S[original query]
Genomic surveillance for SARS-CoV-2 variants: Circulation of Omicron lineages - United States, January 2022-May 2023
Ma KC , Shirk P , Lambrou AS , Hassell N , Zheng XY , Payne AB , Ali AR , Batra D , Caravas J , Chau R , Cook PW , Howard D , Kovacs NA , Lacek KA , Lee JS , MacCannell DR , Malapati L , Mathew S , Mittal N , Nagilla RR , Parikh R , Paul P , Rambo-Martin BL , Shepard SS , Sheth M , Wentworth DE , Winn A , Hall AJ , Silk BJ , Thornburg N , Kondor R , Scobie HM , Paden CR .
MMWR Morb Mortal Wkly Rep 2023 72 (24) 651-656
Effectiveness of monovalent rotavirus vaccine against hospitalizations due to all rotavirus and equine-like G3P[8] genotypes in Haiti 2014-2019.
Burnett E , Juin S , Esona MD , Desormeaux AM , Aliabadi N , Pierre M , Andre-Alboth J , Leshem E , Etheart MD , Patel R , Dely P , Fitter D , Jean-Denis G , Kalou M , Katz MA , Bowen MD , Grant-Greene Y , Boncy J , Parashar UD , Joseph GA , Tate JE .
Vaccine 2021 39 (32) 4458-4462
Use of partial N-gene sequences as a tool to monitor progress on rabies control and elimination efforts in Ethiopia.
Binkley L , Deressa A , Shi M , Jara M , Escobar LE , Mauldin MR , Matheny A , O'Quin J , Pieracci EG , Kling C , Hartloge C , Yimer G , Abate E , Gebreyes W , Reynolds M , Belay E , Shiferaw M , Nakazawa Y , Velasco-Villa A .
Acta Trop 2021 221 106022 type
Whole gene analysis of a genotype G29P[6] human rotavirus strain identified in Central African Republic.
Banga-Mingo V , Esona MD , Betrapally NS , Gautam R , Jaimes J , Katz E , Waku-Kouomou D , Bowen MD , Gouandjika-Vasilache I .
BMC Res Notes 2021 14 (1) 218 type
Rotavirus Genotype Trends and Gastrointestinal Pathogen Detection in the United States, 2014-16: Results from the New Vaccine Surveillance Network.
Esona MD , Ward ML , Wikswo ME , Rustempasic SM , Gautam R , Perkins C , Selvarangan R , Harrison CJ , Boom JA , Englund JA , Klein EJ , Staat MA , McNeal MM , Halasa N , Chappell J , Weinberg GA , Payne DC , Parashar UD , Bowen MD .
J Infect Dis 2021 224 (9) 1539-1549 type
Western Kenyan Anopheles gambiae showing intense permethrin resistance harbour distinct microbiota.
Omoke D , Kipsum M , Otieno S , Esalimba E , Sheth M , Lenhart A , Njeru EM , Ochomo E , Dada N .
Malar J 2021 20 (1) 77 type
Portable Rabies Virus Sequencing in Canine Rabies Endemic Countries Using the Oxford Nanopore MinION.
Gigante CM , Yale G , Condori RE , Costa NC , Long NV , Minh PQ , Chuong VD , Tho ND , Thanh NT , Thin NX , Hanh NTH , Wambura G , Ade F , Mito O , Chuchu V , Muturi M , Mwatondo A , Hampson K , Thumbi SM , Thomae BG , dePaz VH , Meneses S , Munyua P , Moran D , Cadena L , Gibson A , Wallace RM , Pieracci EG , Li Y .
Viruses 2020 12 (11) type
Molecular characteristics of rotavirus genotypes circulating in the south of Benin, 2016-2018.
Agbla JM , Esona MD , Agbankpe AJ , Capo-Chichi A , Gautam R , Dougnon TV , Razack O , Bowen MD , Bankole HS .
BMC Res Notes 2020 13 (1) 485
The Longitudinal Epidemiologic Assessment of Diabetes Risk (LEADR): Unique 1.4 M patient Electronic Health Record cohort.
Fishbein HA , Birch RJ , Mathew SM , Sawyer HL , Pulver G , Poling J , Kaelber D , Mardon R , Johnson MC , Pace W , Umbel KD , Zhang X , Siegel KR , Imperatore G , Shrestha S , Proia K , Cheng Y , McKeeverBullard K , Gregg EW , Rolka D , Pavkov ME .
Healthc (Amst) 2020 8 (4) 100458
Whole genome and in-silico analyses of G1P[8] rotavirus strains from pre- and post-vaccination periods in Rwanda.
Rasebotsa S , Mwangi PN , Mogotsi MT , Sabiu S , Magagula NB , Rakau K , Uwimana J , Mutesa L , Muganga N , Murenzi D , Tuyisenge L , Jaimes J , Esona MD , Bowen MD , Mphahlele MJ , Seheri ML , Mwenda JM , Nyaga MM .
Sci Rep 2020 10 (1) 13460 type
Outbreak of diarrhoea in piglets caused by novel rotavirus genotype G4P[49] in north-western district of Bangladesh, February 2014.
Sarkar S , DiohEsona M , Gautam R , Castro CJ , Ng TFF , Haque W , Khan SU , Hossain ME , Rahman MZ , Gurley ES , Kennedy ED , Bowen MD , Parashar UD , Rahman M .
Transbound Emerg Dis 2019 67 (1) 442-449 type
Distribution of rotavirus genotypes in the post-vaccine introduction era in Ashaiman, Greater Accra Region, Ghana, 2014-2016.
Letsa V , Damanka S , Dennis F , Lartey B , Armah GE , Betrapally N , Gautam R , Esona MD , Bowen MD , Quaye O .
J Med Virol 2019 91 (11) 2025-2028
Whole-gene analysis of inter-genogroup reassortant rotaviruses from the Dominican Republic: Emergence of equine-like G3 strains and evidence of their reassortment with locally-circulating strains.
Katz EM , Esona MD , Betrapally NS , DeLaCruzDeLeon LA , Neira YR , Rey GJ , Bowen MD .
Virology 2019 534 114-131 type
Characterization of Novel Reoviruses [Wad Medani virus (Orbivirus) and Kundal (Coltivirus)] collected from Hyalomma antolicum ticks in India during CCHF surveillance.
Yadav PD , Whitmer SLM , Sarkale P , Ng TFF , Goldsmith CS , Nyayanit DA , Esona MD , Shrivastava-Ranjan P , Lakra R , Pardeshi P , Majumdar TD , Francis A , Klena JD , Nichol ST , Stroher U , Mourya D .
J Virol 2019 93 (13)
Multiple introductions and antigenic mismatch with vaccines may contribute to increased predominance of G12P[8] rotaviruses in the United States.
Ogden KM , Tan Y , Akopov A , Stewart LS , McHenry R , Fonnesbeck CJ , Piya B , Carter MH , Fedorova NB , Halpin RA , Shilts MH , Edwards KM , Payne DC , Esona MD , Mijatovic-Rustempasic S , Chappell JD , Patton JT , Halasa NB , Das SR .
J Virol 2018 93 (1) type
Characterisation of a rare, reassortant human G10P[14] rotavirus strain detected in Honduras.
Quaye O , Roy S , Rungsrisuriyachai K , Esona MD , Xu Z , Tam KI , Banegas DJC , Rey-Benito G , Bowen MD .
Mem Inst Oswaldo Cruz 2018 113 (1) 9-16 type
Emergence of G12 and G9 rotavirus genotypes in the Central African Republic, January 2014 to February 2016.
Moure UAE , Banga-Mingo V , Gody JC , Mwenda JM , Fandema J , Waku-Kouomou D , Manengu C , Koyazegbe TD , Esona MD , Bowen MD , Gouandijka-Vasilache I .
BMC Res Notes 2018 11 (1) 5
Molecular characterization of a human G20P[28] rotavirus a strain with multiple genes related to bat rotaviruses.
Esona Mathew D, Roy Sunando, Rungsrisuriyachai Kunchala, Gautam Rashi, Hermelijn Sandra, Rey-Benito Gloria, Bowen Michael D. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2018 57166-170 .
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2018 57166-170 type
Pre-vaccine circulating group a rotavirus strains in under 5 years children with acute diarrhea during 1999-2013 in Cameroon.
Ndombo Paul Koki, Ndze Valantine N, Fokunang Charles, Ashukem Taku Nadesh, Boula Angeline, Kinkela Mina N, Ndode Corlins E, Seheri Mapaseka L, Bowen Michael D, Waku-Kouomou Diane, Esona Mathew D. Virology 2017 Aug 1(4) .
Virology 2017 Aug 1(4)
Cost projections for implementation of safety interventions to prevent transfusion-transmitted Zika virus infection in the United States.
Ellingson Katherine D, Sapiano Mathew R P, Haass Kathryn A, Savinkina Alexandra A, Baker Misha L, Henry Richard A, Berger James J, Kuehnert Matthew J, Basavaraju Sridhar V.Transfusion 2017 Jun 1625-1633 .
Transfusion 2017 Jun 1625-1633
Characterization of a triple-recombinant, reassortant rotavirus strain from the Dominican Republic.
Esona Mathew D, Roy Sunando, Rungsrisuriyachai Kunchala, Sanchez Jacqueline, Vasquez Lina, Gomez Virgen, Rios Lourdes Aviles, Bowen Michael D, Vazquez Marietta. The Journal of general virology 2017 Feb 98(2) 134-142 .
The Journal of general virology 2017 Feb (2) 134-142
Sensitive and specific nested PCR assay for detection of rotavirus A in samples with a low viral load.
Mijatovic-Rustempasic Slavica, Esona Mathew D, Williams Alice L, Bowen Michael D.Journal of virological methods 2016 Jul 41-46 .
Journal of virological methods 2016 Jul 41-46
Rotavirus Strain Trends During the Postlicensure Vaccine Era: United States, 2008-2013.
Bowen Michael D, Mijatovic-Rustempasic Slavica, Esona Mathew D, Teel Elizabeth N, Gautam Rashi, Sturgeon Michele, Azimi Parvin H, Baker Carol J, Bernstein David I, Boom Julie A, Chappell James, Donauer Stephanie, Edwards Kathryn M, Englund Janet A, Halasa Natasha B, Harrison Christopher J, Johnston Samantha H, Klein Eileen J, McNeal Monica M, Moffatt Mary E, Rench Marcia A, Sahni Leila C, Selvarangan Rangaraj, Staat Mary A, Szilagyi Peter G, Weinberg Geoffrey A, Wikswo Mary E, Parashar Umesh D, Payne Daniel C. The Journal of infectious diseases 2016 Sep 214(5) 732-8 .
The Journal of infectious diseases 2016 Sep 214(5) 732-8
Effectiveness of Monovalent Rotavirus Vaccine After Programmatic Implementation in Botswana: A Multisite Prospective Case-Control Study.
Gastañaduy Paul A, Steenhoff Andrew P, Mokomane Margaret, Esona Mathew D, Bowen Michael D, Jibril Haruna, Pernica Jeffrey M, Mazhani Loeto, Smieja Marek, Tate Jacqueline E, Parashar Umesh D, Goldfarb David M.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 May S161-7 .
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 May S161-7
One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix® and RotaTeq®) in stool samples.
Gautam Rashi, Mijatovic-Rustempasic Slavica, Esona Mathew D, Tam Ka Ian, Quaye Osbourne, Bowen Michael D. PeerJ 2016 4e1560 .
PeerJ 2016 4e1560
G2P[4]-RotaTeq Reassortant Rotavirus in Vaccinated Child, United States.
Roy Sunando, Rungsrisuriyachai Kunchala, Esona Mathew D, Boom Julie A, Sahni Leila C, Rench Marcia A, Baker Carol J, Wikswo Mary E, Payne Daniel C, Parashar Umesh D, Bowen Michael D. Emerging infectious diseases 2015 Nov 21(11) 2103-4 .
Emerging infectious diseases 2015 Nov 21(11) 2103-4
Multiplexed one-step RT-PCR VP7 and VP4 genotyping assays for rotaviruses using updated primers.
Esona Mathew D, Gautam Rashi, Tam Ka Ian, Williams Alice, Mijatovic-Rustempasic Slavica, Bowen Michael D. Journal of virological methods 2015 Oct 22396-104 .
Journal of virological methods 2015 Oct 22396-104
Rotavirus.
Esona Mathew D, Gautam Rashi. Clin. Lab. Med. 2015 Jun 35(2) 363-391 .
Clin. Lab. Med. 2015 Jun 35(2) 363-391
Rotavirus Group A Genotypes Detected Through Diarrheal Disease Surveillance in Haiti, 2012.
Esona Mathew D, Buteau Josiane, Lucien Mentor Ali Ber, Joseph Gerard A, Leshem Eyal, Boncy Jacques, Katz Mark A, Bowen Michael D, Balajee S Arunmozhi. Am. J. Trop. Med. Hyg. 2015 Jul 8. 93(1) 54-6 .
Am. J. Trop. Med. Hyg. 2015 Jul 8. 93(1) 54-6
Full genomic characterization and phylogenetic analysis of a zoonotic human G8P[14] rotavirus strain detected in a sample from Guatemala.
Gautam Rashi, Mijatovic-Rustempasic Slavica, Roy Sunando, Esona Mathew D, Lopez Beatriz, Mencos Yolanda, Rey-Benito Gloria, Bowen Michael D. Infect. Genet. Evol. 2015 Jul 33206-11 .
Infect. Genet. Evol. 2015 Jul 33206-11
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