CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Sep 16, 2024. (Total: 6309 publications)

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Records 1-30 (of 31 Records)

Query Trace: Marine R[original query]
Detection of Leptospira kirschneri in a short-beaked common dolphin (Delphinus delphis delphis) stranded off the coast of southern California, USA Prager KC , Danil K , Wurster E , Colegrove KM , Galloway R , Kettler N , Mani R , McDonough RF , Sahl JW , Stone NE , Wagner DM , Lloyd-Smith JO . BMC Vet Res 2024 20 (1) 266
Pathogenic Leptospira are widespread in the urban wildlife of southern California Helman SK , Tokuyama AFN , Mummah RO , Stone NE , Gamble MW , Snedden CE , Borremans B , Gomez ACR , Cox C , Nussbaum J , Tweedt I , Haake DA , Galloway RL , Monzón J , Riley SPD , Sikich JA , Brown J , Friscia A , Sahl JW , Wagner DM , Lynch JW , Prager KC , Lloyd-Smith JO . Sci Rep 2023 13 (1) 14368
Nearly Complete Genome Sequences of Type 2 Sabin-Like Polioviruses from Northern Nigerian Poliovirus Surveillance, 2016 to 2018. Zhao K , Schmidt A , Tang K , Castro CJ , Liu H , Pang H , Chen Q , Baba M , Soji OB , Bukbuk D , Akinola M , Adeniji JA , Marine RL , Ng TFF , Jorba J , Burns CC . Microbiol Resour Announc 2022 12 (1) e0073522
HISTOLOGIC LESIONS IN PLACENTAS OF NORTHERN FUR SEALS (CALLORHINUS URSINUS) FROM A POPULATION WITH HIGH PLACENTAL PREVALENCE OF COXIELLA BURNETII. Conway R , Duncan C , Foster RA , Kersh GJ , Raverty S , Gelatt T , Frank C . J Wildl Dis 2022 58 (2) 333-340
VPipe: an Automated Bioinformatics Platform for Assembly and Management of Viral Next-Generation Sequencing Data. Wagner DD , Marine RL , Ramos E , Ng TFF , Castro CJ , Okomo-Adhiambo M , Harvey K , Doho G , Kelly R , Jain Y , Tatusov RL , Silva H , Rota PA , Khan AN , Oberste MS . Microbiol Spectr 2022 10 (2) e0256421
Next-Generation Sequencing of Human Respiratory Syncytial Virus Subgroups A and B Genomes. Wang L , Ng TFF , Castro CJ , Marine RL , Magaña LC , Esona M , Peret TCT , Thornburg NJ . J Virol Methods 2021 299 114335
Evidence of False Positivity for Vibrio Species Tested by Gastrointestinal Multiplex PCR Panels, Minnesota, 2016-2018. Decuir M , Fowler RC , Cebelinski E , Smith K , Boxrud D , Medus C . Open Forum Infect Dis 2021 8 (6) ofab247
Shellfish poisoning outbreaks in Cuddalore District, Tamil Nadu, India. Velayudhan A , Nayak J , Murhekar MV , Dikid T , Sodha SV . Indian J Public Health 2021 65 S29-s33
Complete Genome Sequence of Francisella sp. Strain LA11-2445 (FDC406), a Novel Francisella Species Isolated from a Human Skin Lesion. Öhrman C , Uneklint I , Karlsson L , Respicio-Kingry L , Forsman M , Petersen JM , Sjödin A . Microbiol Resour Announc 2021 10 (2)
The effect of variant interference on de novo assembly for viral deep sequencing. Castro CJ , Marine RL , Ramos E , Ng TFF . BMC Genomics 2020 21 (1) 421
A Vibrio cholerae Core Genome Multilocus Sequence Typing Scheme to Facilitate the Epidemiological Study of Cholera. Liang KYH , Orata FD , Islam MT , Nasreen T , Alam M , Tarr CL , Boucher YF . J Bacteriol 2020 202 (24)
Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses. Marine RL , Magana LC , Castro CJ , Zhao K , Montmayeur AM , Schmidt A , Diez-Valcarce M , Fan Ng TF , Vinje J , Burns CC , Allan Nix W , Rota PA , Oberste MS . J Virol Methods 2020 280 113865
Nearly Complete Genome Sequence of an Echovirus 30 Strain from a Cluster of Aseptic Meningitis Cases in California, September 2017. Pan CY , Huynh T , Padilla T , Chen A , Ng TFF , Marine RL , Castro CJ , Nix WA , Wadford DA . Microbiol Resour Announc 2019 8 (44)
Pan-viral serology implicates enteroviruses in acute flaccid myelitis. Schubert RD , Hawes IA , Ramachandran PS , Ramesh A , Crawford ED , Pak JE , Wu W , Cheung CK , O'Donovan BD , Tato CM , Lyden A , Tan M , Sit R , Sowa GA , Sample HA , Zorn KC , Banerji D , Khan LM , Bove R , Hauser SL , Gelfand AA , Johnson-Kerner BL , Nash K , Krishnamoorthy KS , Chitnis T , Ding JZ , McMillan HJ , Chiu CY , Briggs B , Glaser CA , Yen C , Chu V , Wadford DA , Dominguez SR , Ng TFF , Marine RL , Lopez AS , Nix WA , Soldatos A , Gorman MP , Benson L , Messacar K , Konopka-Anstadt JL , Oberste MS , DeRisi JL , Wilson MR . Nat Med 2019 25 (11) 1748-1752
Antibodies to Enteroviruses in Cerebrospinal Fluid of Patients with Acute Flaccid Myelitis. Mishra N , Ng TFF , Marine RL , Jain K , Ng J , Thakkar R , Caciula A , Price A , Garcia JA , Burns JC , Thakur KT , Hetzler KL , Routh JA , Konopka-Anstadt JL , Nix WA , Tokarz R , Briese T , Oberste MS , Lipkin WI . mBio 2019 10 (4)
Complete Genome Sequences of Human Astrovirus Prototype Strains (Types 1 to 8). Castro CJ , Reynolds E , Monroe SS , Marine RL , Vinje J . Microbiol Resour Announc 2019 8 (7)
Strengthening laboratory surveillance of viral pathogens: Experiences and lessons learned building next-generation sequencing capacity in Ghana. Marine RL , Ntim NAA , Castro CJ , Attiku KO , Pratt D , Duker E , Agbosu E , Ng TFF , Gatei W , Obodai E , Odoom JK , Walker CL , Rota PA , Oberste MS , Ampofo WK , Balajee SA . Int J Infect Dis 2019 81 231-234
Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017. Pan CY , Yagi S , Padilla T , Fei Fan Ng T , Marine RL , Nix WA , Wadford DA . Microbiol Resour Announc 2018 7 (7)
Genetic diversity of human sapovirus across the Americas. Diez-Valcarce M , Castro CJ , Marine RL , Halasa N , Mayta H , Saito M , Tsaknaridis L , Pan CY , Bucardo F , Becker-Dreps S , Lopez MR , Magana LC , Ng TFF , Vinje J . J Clin Virol 2018 104 65-72
Whole-Genome Sequence of Human Rhinovirus C47, Isolated from an Adult Respiratory Illness Outbreak in Butte County, California, 2017. Pan CY , Padilla T , Yagi S , Lewis LS , Ng TFF , Marine RL , Nix WA , Wadford DA . Genome Announc 2018 6 (5)
Near-Complete Genome Sequences of Several New Norovirus Genogroup II Genotypes. Chhabra P , Aswath K , Collins N , Ahmed T , Olortegui MP , Kosek M , Cebelinski E , Cooper PJ , Bucardo F , Lopez MR , Castro CJ , Marine RL , Ng TFF , Vinje J . Genome Announc 2018 6 (6)
Complete Genome Sequences of Mumps and Measles Virus Isolates from Three States in the United States. Magana LC , Espinosa A , Marine RL , Ng TFF , Castro CJ , Montmayeur AM , Hacker JK , Scott S , Whyte T , Bankamp B , Oberste MS , Rota PA . Genome Announc 2017 5 (33)
Genetic and Epidemiologic Trends of Norovirus Outbreaks in the US Demonstrated Emergence of Novel GII.4 Recombinant Viruses, 2013-2016. Cannon JL , Barclay L , Collins NR , Wikswo ME , Castro CJ , Magana LC , Gregoricus N , Marine RL , Chhabra P , Vinje J . J Clin Microbiol 2017 55 (7) 2208-2221
Genomic Characterization of Three Melon Necrotic Spot Viruses Detected in Human Stool Specimens. Marine R , Castro C , Magana L , Ng TF , Aswath K , Collins N , Park GW , Vinje J , Oberste MS . Genome Announc 2017 5 (11)
Detection and Genomic Characterization of Enterovirus D68 in Respiratory Samples Isolated in the United States in 2016. Ng TF , Montmayeur A , Castro C , Cone M , Stringer J , Lamson DM , Rogers SL , Wang Chern SW , Magana L , Marine R , Rubino H , Serinaldi D , George KS , Nix WA . Genome Announc 2016 4 (6)
Molecular characterization of a novel orthomyxovirus from rainbow and steelhead trout (Oncorhynchus mykiss). Batts WN , LaPatra SE , Katona R , Leis E , Ng TF , Brieuc MS , Breyta RB , Purcell MK , Conway CM , Waltzek TB , Delwart E , Winton JR . Virus Res 2017 230 38-49
Insights into the environmental reservoir of pathogenic Vibrio parahaemolyticus using comparative genomics. Hazen TH , Lafon PC , Garrett NM , Lowe TM , Silberger DJ , Rowe LA , Frace M , Parsons MB , Bopp CA , Rasko DA , Sobecky PA . Front Microbiol 2015 6 204
Real-time PCR and Sequencing Assays for Rapid Detection and Identification of Avian Schistosomes in Environmental Samples. Narayanan J , Mull BJ , Brant SV , Loker ES , Collinson J , Secor WE , Hill VR . Appl Environ Microbiol 2015 81 (12) 4207-15
Real-time PCR assays for detection of Brucella spp. and the identification of genotype ST27 in bottlenose dolphins (Tursiops truncatus). Wu Q , McFee WE , Goldstein T , Tiller RV , Schwacke L . J Microbiol Methods 2014 100 99-104
Multiple strains of Coxiella burnetii are present in the environment of St. Paul Island, Alaska Duncan C , Savage K , Williams M , Dickerson B , Kondas AV , Fitzpatrick KA , Guerrero JL , Spraker T , Kersh GJ . Transbound Emerg Dis 2012 60 (4) 345-50