CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Mar 17, 2025. (Total: 6589 publications)

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Records 1-30 (of 45 Records)

Query Trace: Loparev V N[original query]
Correction for Weigand et al., Complete Genome Sequences of Two Bordetella hinzii Strains Isolated from Humans. Weigand MR , Changayil S , Kulasekarapandian Y , Batra D , Loparev V , Juieng P , Rowe L , Sheth M , Davis JK , Tondella ML . Genome Announc 2016 4 (1)
The first complete genome of the simian malaria parasite Plasmodium brasilianum. Bajic M , Ravishankar S , Sheth M , Rowe LA , Pacheco MA , Patel DS , Batra D , Loparev V , Olsen C , Escalante AA , Vannberg F , Udhayakumar V , Barnwell JW , Talundzic E . Sci Rep 2022 12 (1) 19802
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri. Ali IKM , Kelley A , Joseph SJ , Park S , Roy S , Jackson J , Cope JR , Rowe LA , Burroughs M , Sheth M , Batra D , Loparev V . Microbiol Resour Announc 2021 10 (15)
Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens. Weigand MR , Peng Y , Batra D , Burroughs M , Davis JK , Knipe K , Loparev VN , Johnson T , Juieng P , Rowe LA , Sheth M , Tang K , Unoarumhi Y , Williams MM , Tondella ML . mSystems 2019 4 (6)
Draft Genome Sequences of Leishmania ( Leishmania ) amazonensis , Leishmania ( Leishmania ) mexicana , and Leishmania ( Leishmania ) aethiopica , Potential Etiological Agents of Diffuse Cutaneous Leishmaniasis. Batra D , Lin W , Narayanan V , Rowe LA , Sheth M , Zheng Y , Loparev V , de Almeida M . Microbiol Resour Announc 2019 8 (20)
First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case. Lin W , Batra D , Narayanan V , Rowe LA , Sheth M , Zheng Y , Juieng P , Loparev V , de Almeida M . Microbiol Resour Announc 2019 8 (6)
Draft Genome Sequence of French Guiana Leishmania ( Viannia ) guyanensis Strain 204-365, Assembled Using Long Reads. Batra D , Lin W , Rowe LA , Sheth M , Zheng Y , Loparev V , de Almeida M . Microbiol Resour Announc 2018 7 (23)
Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species. Munoz JF , Gade L , Chow NA , Loparev VN , Juieng P , Berkow EL , Farrer RA , Litvintseva AP , Cuomo CA . Nat Commun 2018 9 (1) 5346
PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli , and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene. Lindsey RL , Batra D , Smith P , Patel PN , Tagg KA , Garcia-Toledo L , Loparev VN , Juieng P , Sheth M , Joung YJ , Rowe LA . Microbiol Resour Announc 2018 7 (14)
High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing. Patel PN , Lindsey RL , Garcia-Toledo L , Rowe LA , Batra D , Whitley SW , Drapeau D , Stoneburg D , Martin H , Juieng P , Loparev VN , Strockbine N . Genome Announc 2018 6 (19)
High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing. Kim J , Lindsey RL , Garcia-Toledo L , Loparev VN , Rowe LA , Batra D , Juieng P , Stoneburg D , Martin H , Knipe K , Smith P , Strockbine N . Genome Announc 2018 6 (15)
Genome Sequence of a Multidrug-Resistant Candida haemulonii Isolate from a Patient with Chronic Leg Ulcers in Israel. Chow NA , Gade L , Batra D , Rowe LA , Juieng P , Ben-Ami R , Loparev VN , Litvintseva AP . Genome Announc 2018 6 (15)
Genome Sequence of the Amphotericin B-Resistant Candida duobushaemulonii Strain B09383. Chow NA , Gade L , Batra D , Rowe LA , Juieng P , Loparev VN , Litvintseva AP . Genome Announc 2018 6 (13)
Screening and genomic characterization of filamentous hemagglutinin-deficient Bordetella pertussis. Weigand MR , Pawloski LC , Peng Y , Ju H , Burroughs M , Cassiday PK , Davis JK , DuVall M , Johnson T , Juieng P , Knipe K , Loparev VN , Mathis MH , Rowe LA , Sheth M , Williams MM , Tondella ML . Infect Immun 2018 86 (4)
High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping. Schroeder MR , Juieng P , Batra D , Knipe K , Rowe LA , Sheth M , Smith P , Garcia-Toledo L , Loparev VN , Lindsey RL . Genome Announc 2018 6 (1)
Standardization and validation of real time PCR assays for the diagnosis of histoplasmosis using three molecular targets in an animal model. Lopez LF , Munoz CO , Caceres DH , Tobon AM , Loparev V , Clay O , Chiller T , Litvintseva A , Gade L , Gonzalez A , Gomez BL . PLoS One 2017 12 (12) e0190311
Complete Circularized Genome Sequences of Four Strains of Elizabethkingia anophelis, Including Two Novel Strains Isolated from Wild-Caught Anopheles sinensis. Pei D , Nicholson AC , Jiang J , Chen H , Whitney AM , Villarma A , Bell M , Humrighouse B , Rowe LA , Sheth M , Batra D , Juieng P , Loparev VN , McQuiston JR , Lan Y , Ma Y , Xu J . Genome Announc 2017 5 (47)
Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus. Villarma A , Gulvik CA , Rowe LA , Sheth M , Juieng P , Nicholson AC , Loparev VN , McQuiston JR . Genome Announc 2017 5 (44)
Complete Genome Sequences of Bordetella pertussis Isolates with Novel Pertactin-Deficient Deletions. Weigand MR , Peng Y , Cassiday PK , Loparev VN , Johnson T , Juieng P , Nazarian EJ , Weening K , Tondella ML , Williams MM . Genome Announc 2017 5 (37)
High-Quality Draft Genome Sequences for Four Drug-Resistant or Outbreak-Associated Shigella sonnei Strains Generated with PacBio Sequencing and Whole-Genome Maps. Lindsey RL , Batra D , Rowe L , Loparev V N , Juieng P , Garcia-Toledo L , Bicknese A , Stripling D , Martin H , Chen J , Strockbine N , Trees E . Genome Announc 2017 5 (35)
Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov. Nicholson AC , Gulvik CA , Whitney AM , Humrighouse BW , Graziano J , Emery B , Bell M , Loparev V , Juieng P , Gartin J , Bizet C , Clermont D , Criscuolo A , Brisse S , McQuiston JR . Antonie Van Leeuwenhoek 2017 111 (1) 55-72
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain. Perrin A , Larsonneur E , Nicholson AC , Edwards DJ , Gundlach KM , Whitney AM , Gulvik CA , Bell ME , Rendueles O , Cury J , Hugon P , Clermont D , Enouf V , Loparev V , Juieng P , Monson T , Warshauer D , Elbadawi LI , Walters MS , Crist MB , Noble-Wang J , Borlaug G , Rocha EPC , Criscuolo A , Touchon M , Davis JP , Holt KE , McQuiston JR , Brisse S . Nat Commun 2017 8 15483
Evaluation of TaqMan Array Card (TAC) for the Detection of Central Nervous System Infections in Kenya. Onyango CO , Loparev V , Lidechi S , Bhullar V , Schmid DS , Radford K , Lo MK , Rota P , Johnson BW , Munoz J , Oneko M , Burton D , Black CM , Neatherlin J , Montgomery JM , Fields B . J Clin Microbiol 2017 55 (7) 2035-2044
High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States. Lindsey RL , Batra D , Rowe L , Loparev VN , Stripling D , Garcia-Toledo L , Knipe K , Juieng P , Sheth M , Martin H , Laufer Halpin A . Genome Announc 2017 5 (11)
First Full Draft Genome Sequence of Plasmodium brasilianum. Talundzic E , Ravishankar S , Nayak V , Patel DS , Olsen C , Sheth M , Batra D , Loparev V , Vannberg FO , Udhayakumar V , Barnwell JW . Genome Announc 2017 5 (6)
The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement. Weigand MR , Peng Y , Loparev V , Batra D , Bowden KE , Burroughs M , Cassiday PK , Davis JK , Johnson T , Juieng P , Knipe K , Mathis MH , Pruitt AM , Rowe L , Sheth M , Tondella ML , Williams MM . J Bacteriol 2017 199 (8)
Complete Genome Sequences of Enterococcus rotai LMG 26678T and Enterococcus silesiacus LMG 23085T. Lauer AC , Humrighouse BW , Loparev V , Shewmaker PL , Whitney AM , McQuiston JR , McLaughlin RW . Genome Announc 2016 4 (6)
Complete Genome Sequences of Four Bordetella pertussis Vaccine Reference Strains from Serum Institute of India. Weigand MR , Peng Y , Loparev V , Johnson T , Juieng P , Gairola S , Kumar R , Shaligram U , Gowrishankar R , Moura H , Rees J , Schieltz DM , Williamson Y , Woolfitt A , Barr J , Tondella ML , Williams MM . Genome Announc 2016 4 (6)
Complete Genome Sequences for Three Chromosomes of the Burkholderia stabilis Type Strain (ATCC BAA-67). Bugrysheva JV , Cherney B , Sue D , Conley AB , Rowe LA , Knipe KM , Frace MA , Loparev VN , Avila JR , Anderson K , Hodge DR , Pillai SP , Weigel LM . Genome Announc 2016 4 (6)
Complete Genome Sequences of Four Different Bordetella sp. Isolates Causing Human Respiratory Infections. Weigand MR , Peng Y , Loparev V , Batra D , Bowden KE , Cassiday PK , Davis JK , Johnson T , Juieng P , Miner CE , Rowe L , Sheth M , Tondella ML , Williams MM . Genome Announc 2016 4 (5)