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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Dec 01, 2023. (Total: 4776 publications since 2011)
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Records 1-30 (of 49 Records)
Query Trace: Kelley J[original query]
Molecular Markers of Sulfadoxine-Pyrimethamine Resistance in Samples from Children with Uncomplicated Plasmodium falciparum at Three Sites in Angola in 2019.
Rosillo SR , Dimbu PR , Cndido ALM , Oh JM , Ferreira CM , NietoAndrade B , Labuda S , Horth R , Kelley J , Morais JFM , Fortes F , Martins JF , Talundzic E , Pluciski MM .
Antimicrob Agents Chemother 2023 e0160122
Portable and cost-effective genetic detection and characterization of Plasmodium falciparum hrp2 using the MinION sequencer.
Sabin S , Jones S , Patel D , Subramaniam G , Kelley J , Aidoo M , Talundzic E .
Sci Rep 2023 13 (1) 2893
SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data.
Griswold Taylor, Kapsak Curtis, Chen Jessica C, den Bakker Henk C, Williams Grant, Kelley Alyssa, Vidyaprakash Eshaw, Katz Lee S. Journal of open source software 2022 6(60) .
Journal of open source software 2022 6(60)
Evaluation of a parasite-density based pooled targeted amplicon deep sequencing (TADS) method for molecular surveillance of Plasmodium falciparum drug resistance genes in Haiti.
Louha S , Herman C , Gupta M , Patel D , Kelley J , Oh JM , Guru J , Lemoine JF , Chang MA , Venkatachalam U , Rogier E , Talundzic E .
PLoS One 2022 17 (1) e0262616
Mongooses (Urva auropunctata) as reservoir hosts of Leptospira species in the United States Virgin Islands, 2019-2020.
Cranford HM , Browne AS , LeCount K , Anderson T , Hamond C , Schlater L , Stuber T , Burke-France VJ , Taylor M , Harrison CJ , Matias KY , Medley A , Rossow J , Wiese N , Jankelunas L , deWilde L , Mehalick M , Blanchard GL , Garcia KR , McKinley AS , Lombard CD , Angeli NF , Horner D , Kelley T , Worthington DJ , Valiulis J , Bradford B , Berentsen A , Salzer JS , Galloway R , Schafer IJ , Bisgard K , Roth J , Ellis BR , Ellis EM , Nally JE .
PLoS Negl Trop Dis 2021 15 (11) e0009859
Comparative Genomic and Transcriptomic Analysis of Naegleria fowleri Clinical and Environmental Isolates.
Joseph SJ , Park S , Kelley A , Roy S , Cope JR , Ali IKM .
mSphere 2021 6 (4) e0063721
Plasmodium falciparum kelch 13 Mutations, 9 Countries in Africa, 2014-2018.
Schmedes SE , Patel D , Dhal S , Kelley J , Svigel SS , Dimbu PR , Adeothy AL , Kahunu GM , Nkoli PM , Beavogui AH , Kariuki S , Mathanga DP , Koita O , Ishengoma D , Mohamad A , Hawela M , Moriarty LF , Samuels AM , Gutman J , Plucinski MM , Udhayakumar V , Zhou Z , Lucchi NW , Venkatesan M , Halsey ES , Talundzic E .
Emerg Infect Dis 2021 27 (7) 1902-1908
Targeted deep amplicon sequencing of antimalarial resistance markers in Plasmodium falciparum isolates from Cameroon.
L'Episcopia M , Kelley J , Dongho BGD , Patel D , Schmedes S , Ravishankar S , Perrotti E , Modiano D , Lucchi NW , Russo G , Talundzic E , Severini C .
Int J Infect Dis 2021 107 234-241
Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri.
Ali IKM , Kelley A , Joseph SJ , Park S , Roy S , Jackson J , Cope JR , Rowe LA , Burroughs M , Sheth M , Batra D , Loparev V .
Microbiol Resour Announc 2021 10 (15)
Performance of the BinaxNOW COVID-19 Antigen Card test relative to the SARS-CoV-2 real-time reverse transcriptase polymerase chain reaction assay among symptomatic and asymptomatic healthcare employees.
James AE , Gulley T , Kothari A , Holder K , Garner K , Patil N .
Infect Control Hosp Epidemiol 2021 43 (1) 1-15 type
COVID-19 Outbreak Associated with a 10-Day Motorcycle Rally in a Neighboring State - Minnesota, August-September 2020.
Firestone MJ , Wienkes H , Garfin J , Wang X , Vilen K , Smith KE , Holzbauer S , Plumb M , Pung K , Medus C , Yao JD , Binnicker MJ , Nelson AC , Yohe S , Como-Sabetti K , Ehresmann K , Lynfield R , Danila R .
MMWR Morb Mortal Wkly Rep 2020 69 (47) 1771-1776 type
Continued low efficacy of artemether-lumefantrine in Angola, 2019.
Dimbu PR , Horth R , Cndido ALM , Ferreira CM , Caquece F , Garcia LEA , Andr K , Pembele G , Jandondo D , Bondo BJ , NietoAndrade B , Labuda S , PoncedeLen G , Kelley J , Patel D , Svigel SS , Talundzic E , Lucchi N , Morais JFM , Fortes F , Martins JF , Pluciski MM .
Antimicrob Agents Chemother 2020 65 (2)
Nosocomial hepatitis A outbreak among healthcare workers and patients in a community hospital during an ongoing statewide outbreak.
Brennan J , Mullins H , Tobey K , Jones C , Kainer MA , Fiscus M , May S , Dunn JR , Schaffner W , Jones TF .
Infect Control Hosp Epidemiol 2020 42 (2) 1-3
Evaluation of an ensemble-based distance statistic for clustering MLST datasets using epidemiologically defined clusters of cyclosporiasis.
Nascimento FS , Barratt J , Houghton K , Plucinski M , Kelley J , Casillas S , Bennett CC , Snider C , Tuladhar R , Zhang J , Clemons B , Madison-Antenucci S , Russell A , Cebelinski E , Haan J , Robinson T , Arrowood MJ , Talundzic E , Bradbury RS , Qvarnstrom Y .
Epidemiol Infect 2020 148 e172
Malaria Risk and Prevention in Asian Migrants to Angola.
Martins JF , Marques C , Nieto-Andrade B , Kelley J , Patel D , Nace D , Herman C , Barratt J , PoncedeLeon G , Talundzic E , Rogier E , Halsey ES , Plucinski MM .
Am J Trop Med Hyg 2020 103 (5) 1918-1926
Exploratory analysis of machine learning approaches for surveillance of Zika-associated birth defects.
Lusk R , Zimmerman J , VanMaldeghem K , Kim S , Roth NM , Lavinder J , Fulton A , Raycraft M , Ellington SR , Galang RR .
Birth Defects Res 2020 112 (18) 1450-1460
Comparison of Molecular Subtyping and Antimicrobial Resistance Detection Methods Used in a Large Multi-State Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Linked to Pet Store Puppies.
Joseph LA , FrancoisWatkins LK , Chen J , Tagg KA , Bennett C , Caidi H , Folster JP , Laughlin ME , Koski L , Silver R , Stevenson L , Robertson S , Pruckler J , Nichols M , Pouseele H , Carleton HA , Basler C , Friedman CR , Geissler A , Hise KB , Aubert RD .
J Clin Microbiol 2020 58 (10)
Efficacy and safety of artesunate-amodiaquine and artemether-lumefantrine and prevalence of molecular markers associated with resistance, Guinea: an open-label two-arm randomised controlled trial.
Beavogui AH , Camara A , Delamou A , Diallo MS , Doumbouya A , Kourouma K , Bouedouno P , Guilavogui T , DosSantosSouza S , Kelley J , Talundzic E , Fofana A , Plucinski MM .
Malar J 2020 19 (1) 223
Targeted deep amplicon sequencing of kelch 13 and cytochrome b in Plasmodium falciparum isolates from an endemic African country using the Malaria Resistance Surveillance (MaRS) protocol.
L'Episcopia M , Kelley J , Patel D , Schmedes S , Ravishankar S , Menegon M , Perrotti E , Nurahmed AM , Talha AA , Nour BY , Lucchi N , Severini C , Talundzic E .
Parasit Vectors 2020 13 (1) 137
Viruses in the Built Environment (VIBE) meeting report.
Prussin AJ 2nd , Belser JA , Bischoff W , Kelley ST , Lin K , Lindsley WG , Nshimyimana JP , Schuit M , Wu Z , Bibby K , Marr LC .
Microbiome 2020 8 (1) 1
Bloodstream Infections with a Novel Nontuberculous Mycobacterium Involving 52 Outpatient Oncology Clinic Patients - Arkansas, 2018.
Labuda SM , Garner K , Cima M , Moulton-Meissner H , LauferHalpin A , Charles-Toney N , Yu P , Bolton E , Pierce R , Crist MB , Gomes D , Gable P , McAllister G , Lawsin A , Houston H , Patil N , Wheeler JG , Bradsher R , Vyas K , Haselow D .
Clin Infect Dis 2019 71 (7) e178-e185
Onsite investigation at a mail-order hatchery following a multistate Salmonella illness outbreak linked to live poultry-United States, 2018.
Robertson SA , Sidge JL , Koski L , Hardy MC , Stevenson L , Signs K , Stobierski MG , Bidol S , Donovan D , Soehnlen M , Jones K , Robeson S , Hambley A , Stefanovsky L , Brandenburg J , Hise K , Tolar B , Nichols MC , Basler C .
Poult Sci 2019 98 (12) 6964-6972
A pharmacokinetic and pharmacogenetic evaluation of contraceptive implants and antiretroviral therapy among women in Kenya and Uganda.
Patel RC , Stalter RM , Thomas KK , Tamraz B , Blue SW , Erikson DW , Kim CJ , Kelley EJ , Nanda K , Kourtis AP , Lingappa JR , Mugo N , Baeten JM , Scarsi KK .
AIDS 2019 33 (13) 1995-2004
Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak Investigation.
Besser JM , Carleton HA , Trees E , Stroika SG , Hise K , Wise M , Gerner-Smidt P .
Foodborne Pathog Dis 2019 16 (7) 504-512
PulseNet: Entering the Age of Next-Generation Sequencing.
Ribot EM , Freeman M , Hise KB , Gerner-Smidt P .
Foodborne Pathog Dis 2019 16 (7) 451-456
Sepsis Attributed to Bacterial Contamination of Platelets Associated with a Potential Common Source - Multiple States, 2018.
Jones SA , Jones JM , Leung V , Nakashima AK , Oakeson KF , Smith AR , Hunter R , Kim JJ , Cumming M , McHale E , Young PP , Fridey JL , Kelley WE , Stramer SL , Wagner SJ , West FB , Herron R , Snyder E , Hendrickson JE , Peaper DR , Gundlapalli AV , Langelier C , Miller S , Nambiar A , Moayeri M , Kamm J , Moulton-Meissner H , Annambhotla P , Gable P , McAllister GA , Breaker E , Sula E , Halpin AL , Basavaraju SV .
MMWR Morb Mortal Wkly Rep 2019 68 (23) 519-523
Evolution and genetic diversity of the k13 gene associated with artemisinin delayed parasite clearance in Plasmodium falciparum .
Pacheco MA , Kadakia ER , Chaudhary Z , Perkins DJ , Kelley J , Ravishankar S , Cranfield M , Talundzic E , Udhayakumar V , Escalante AA .
Antimicrob Agents Chemother 2019 63 (8)
An Overview of PulseNet USA Databases.
Tolar B , Joseph LA , Schroeder MN , Stroika S , Ribot EM , Hise KB , Gerner-Smidt P .
Foodborne Pathog Dis 2019 16 (7) 457-462
Using the Plasmodium mitochondrial genome for classifying mixed-species infections and inferring the geographical origin of P. falciparum parasites imported to the U.S.
Schmedes SE , Patel D , Kelley J , Udhayakumar V , Talundzic E .
PLoS One 2019 14 (4) e0215754
Notes from the Field: Environmental Investigation of a Multistate Salmonellosis Outbreak Linked to Live Backyard Poultry from a Mail-Order Hatchery - Michigan, 2018.
Hardy MC , Robertson SA , Sidge J , Signs K , Stobierski MG , Jones K , Soehnlen M , Stefanovsky L , Hambley A , Brandenburg JM , Martin H , Lauer AC , Fields P , Koski L , Stevenson LM , Pabilonia KL , Nichols MC , Basler CA , Ribot EM , Hise KB .
MMWR Morb Mortal Wkly Rep 2019 67 (5152) 1430-1431
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