CDC-Authored Genomics and Precision Health Publications Database

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Last data update: Dec 02, 2024. (Total: 6432 publications)

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Records 1-30 (of 31 Records)

Query Trace: Johnson JA[original query]
HIV immunocapture reveals particles expressed in semen under integrase strand transfer inhibitor-based therapy are largely myeloid cell-derived and disparate Johnson JA , Li JF , Politch JA , Lipscomb JT , Tino AS , DeFelice J , Gelman M , Anderson DJ , Mayer KH . J Infect Dis 2024 230 (1) 78-85
Acute hepatitis due to primary human immunodeficiency virus infection Elliott EI , Smith D , Lipscomb J , Banini B , Meurer L , Vanderford TH , Johnson JA , Jain D , Achhra A . Open Forum Infect Dis 2024 11 (4) ofae170
HIV immunocapture reveals particles expressed in semen under INSTI-based therapy are largely myeloid cell-derived and disparate from circulating provirus Johnson JA , Li JF , Politch JA , Lipscomb JT , Santos Tino A , DeFelice J , Gelman M , Anderson DJ , Mayer KH . J Infect Dis 2024
Genetics and genomics for the prevention and treatment of cardiovascular disease: update: a scientific statement from the American Heart Association. Ganesh SK , Arnett DK , Assimes TL , Basson CT , Chakravarti A , Ellinor PT , Engler MB , Goldmuntz E , Herrington DM , Hershberger RE , Hong Y , Johnson JA , Kittner SJ , McDermott DA , Meschia JF , Mestroni L , O'Donnell CJ , Psaty BM , Vasan RS , Ruel M , Shen WK , Terzic A , Waldman SA . Circulation 2013 128 (25) 2813-51
Association of Secretor Status and Recent Norovirus Infection With Gut Microbiome Diversity Metrics in a Veterans Affairs Population. Johnson JA , Read TD , Petit RA3rd , Marconi VC , Meagley KL , Rodriguez-Barradas MC , Beenhouwer DO , Brown ST , Holodniy M , Lucero-Obusan CA , Schirmer P , Ingersoll JM , Kraft CS , Neill FH , Atmar RL , Kambhampati AK , Cates JE , Mirza SA , Hall AJ , Cardemil CV , Lopman BA . Open Forum Infect Dis 2022 9 (5) ofac125
Transmitted Drug Resistance Among HIV-1 Diagnoses in the United States, 2014-2018. McClung RP , Oster AM , Ocfemia MCB , Saduvala N , Heneine W , Johnson JA , Hernandez AL . Clin Infect Dis 2021 74 (6) 1055-1062
Do I Have HIV or Not? Lack of RNA Detection and the Case for Sensitive DNA Testing. Springer SA , Masciotra S , Johnson JA , Campbell S . Open Forum Infect Dis 2020 7 (11) ofaa478
Phylodynamic Analysis Complements Partner Services by Identifying Acute and Unreported HIV Transmission. Campbell EM , Patala A , Shankar A , Li JF , Johnson JA , Westheimer E , Gay CL , Cohen SE , Switzer WM , Peters PJ . Viruses 2020 12 (2)
Natural selection favoring more transmissible HIV detected in United States molecular transmission network. Wertheim JO , Oster AM , Switzer WM , Zhang C , Panneer N , Campbell E , Saduvala N , Johnson JA , Heneine W . Nat Commun 2019 10 (1) 5788
Maintenance and reappearance of extremely divergent intra-host HIV-1 variants. Wertheim JO , Oster AM , Murrell B , Saduvala N , Heneine W , Switzer WM , Johnson JA . Virus Evol 2018 4 (2) vey030
Transmission fitness of drug-resistant HIV revealed in a surveillance system transmission network. Wertheim JO , Oster AM , Johnson JA , Switzer WM , Saduvala N , Hernandez AL , Hall HI , Heneine W . Virus Evol 2017 3 (1) vex008
Incident infection and resistance mutation analysis of dried blood spots collected in a field study of HIV risk groups, 2007-2010 Wei X , Smith AJ , Forrest DW , Cardenas GA , Beck DW , LaLota M , Metsch LR , Sionean C , Owen SM , Johnson JA . PLoS One 2016 11 (7) e0159266
Sensitive sentinel mutation screening reveals differential underestimation of transmitted HIV drug resistance among demographic groups. Li JF , Linley L , Kline R , Ziebell R , Heneine W , Johnson JA . AIDS 2016 30 (9) 1439-45
Longitudinal Detection and Persistence of Minority Drug-Resistant Populations and Their Effect on Salvage Therapy. Nishizawa M , Matsuda M , Hattori J , Shiino T , Matano T , Heneine W , Johnson JA , Sugiura W . PLoS One 2015 10 (9) e0135941
Phylodynamic analysis of clinical and environmental Vibrio cholerae isolates from Haiti reveals diversification driven by positive selection. Azarian T , Ali A , Johnson JA , Mohr D , Prosperi M , Veras NM , Jubair M , Strickland SL , Rashid MH , Alam MT , Weppelmann TA , Katz LS , Tarr CL , Colwell RR , Morris JG Jr , Salemi M . mBio 2014 5 (6)
HIV reverse-transcriptase drug resistance mutations during early infection reveal greater transmission diversity than in envelope sequences. Lipscomb JT , Switzer WM , Li JF , Masciotra S , Owen SM , Johnson JA . J Infect Dis 2014 210 (11) 1827-37
Sensitive testing of plasma HIV-1 RNA and Sanger sequencing of cellular HIV-1 DNA for the detection of drug resistance prior to starting first-line antiretroviral therapy with etravirine or efavirenz. Geretti AM , Conibear T , Hill A , Johnson JA , Tambuyzer L , Thys K , Vingerhoets J , Van Delft Y . J Antimicrob Chemother 2014 69 (4) 1090-7
Highly-sensitive allele-specific PCR testing identifies a greater prevalence of transmitted HIV drug resistance in Japan. Nishizawa M , Hattori J , Shiino T , Matano T , Heneine W , Johnson JA , Sugiura W . PLoS One 2013 8 (12) e83150
Evaluation of the CDC proposed laboratory HIV testing algorithm among men who have sex with men (MSM) from five US metropolitan statistical areas using specimens collected in 2011 Masciotra S , Smith AJ , Youngpairoj AS , Sprinkle P , Miles I , Sionean C , Paz-Bailey G , Johnson JA , Owen SM . J Clin Virol 2013 58 Suppl 1 e8-e12
CD4+ cell count, viral load, and drug resistance patterns among heterosexual breakthrough HIV infections in a study of oral preexposure prophylaxis Chirwa LI , Johnson JA , Niska RW , Segolodi TM , Henderson FL , Rose CE , Li JF , Thigpen MC , Matlhaba O , Paxton LA , Brooks JT . AIDS 2013 28 (2) 223-6
Sensitive assessment of the virologic outcomes of stopping and restarting non-nucleoside reverse transcriptase inhibitor-based antiretroviral therapy Geretti AM , Fox Z , Johnson JA , Booth C , Lipscomb J , Stuyver LJ , Tachedjian G , Baxter J , Touloumi G , Lehmann C , Owen A , Phillips A . PLoS One 2013 8 (7) e69266
Recent advances in research of HIV infection: implications of viral and host genetics on treatment and prevention. Haaland RE , Johnson JA , Tang J . Public Health Genomics 2013 16 31-6
Impact of minority nonnucleoside reverse transcriptase inhibitor resistance mutations on resistance genotype after virologic failure. Li JZ , Paredes R , Ribaudo HJ , Kozal MJ , Svarovskaia ES , Johnson JA , Geretti AM , Metzner KJ , Jakobsen MR , Hullsiek KH , Ostergaard L , Miller MD , Kuritzkes DR . J Infect Dis 2013 207 (6) 893-7
Prolonged tenofovir treatment of macaques infected with K65R reverse transcriptase mutants of SIV results in the development of antiviral immune responses that control virus replication after drug withdrawal Van Rompay KK , Trott KA , Jayashankar K , Geng Y , Labranche CC , Johnson JA , Landucci G , Lipscomb J , Tarara RP , Canfield DR , Heneine W , Forthal DN , Montefiori D , Abel K . Retrovirology 2012 9 57
Low-frequency HIV-1 drug resistance mutations and risk of NNRTI-based antiretroviral treatment failure: a systematic review and pooled analysis. Li JZ , Paredes R , Ribaudo HJ , Svarovskaia ES , Metzner KJ , Kozal MJ , Hullsiek KH , Balduin M , Jakobsen MR , Geretti AM , Thiebaut R , Ostergaard L , Masquelier B , Johnson JA , Miller MD , Kuritzkes DR . JAMA 2011 305 (13) 1327-35
Detection of low-level K65R variants in nucleoside reverse transcriptase inhibitor-naive chronic and acute HIV-1 subtype C infections. Li JF , Lipscomb JT , Wei X , Martinson NA , Morris L , Heneine W , Johnson JA . J Infect Dis 2011 203 (6) 798-802
Minority HIV mutation detection in dried blood spots indicates high specimen integrity and reveals hidden archived drug resistance. Wei X , Youngpairoj AS , Garrido C , Zahonero N , Corral A , de Mendoza C , Heneine W , Johnson JA , Garcia-Lerma JG . J Clin Virol 2010 50 (2) 148-52
Addition of 7 days of zidovudine plus lamivudine to peripartum single-dose nevirapine effectively reduces nevirapine resistance postpartum in HIV-infected mothers in Malawi Farr SL , Nelson JA , Ng'ombe TJ , Kourtis AP , Chasela C , Johnson JA , Kashuba AD , Tegha GL , Wiener J , Eron JJ , Banda HN , Mpaso M , Lipscomb J , Matiki C , Fiscus SA , Jamieson DJ , van der Horst C . J Acquir Immune Defic Syndr 2010 54 (5) 515-23
Prevalence of transmitted drug resistance associated mutations and HIV-1 subtypes in new HIV-1 diagnoses, U.S.-2006 Wheeler WH , Ziebell RA , Zabina H , Pieniazek D , Prejean J , Bodnar UR , Mahle KC , Heneine W , Johnson JA , Hall HI . AIDS 2010 24 (8) 1203-12
Low-frequency HIV-1 drug resistance mutations can be clinically significant but must be interpreted with caution Johnson JA , Geretti AM . J Antimicrob Chemother 2010 65 (7) 1322-6