CDC-Authored Genomics and Precision Health Publications Database
Last data update: Dec 02, 2024. (Total: 6432 publications)
| Query Trace: Jensen B[original query] |
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| Assembly and phylogeographical analysis of novel Taenia solium mitochondrial genomes suggest stratification within the African-American genotype
Jiménez-Avalos G , Soto-Obando A , Solis M , Gilman RH , Cama V , Gonzalez AE , García HH , Sheen P , Requena D , Zimic M . Parasit Vectors 2023 16 (1) 349 
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| Infant antibody and B-cell responses following confirmed pediatric GII.17 norovirus infections functionally distinguish GII.17 genetic clusters
Strother CA , Brewer-Jensen PD , Becker-Dreps S , Zepeda O , May S , Gonzalez F , Reyes Y , McElvany BD , Averill AM , Mallory ML , Montmayeur AM , Costantini VP , Vinjé J , Baric RS , Bucardo F , Lindesmith LC , Diehl SA . Front Immunol 2023 14 1229724 |
| Trends in laboratory-confirmed SARS-CoV-2 reinfections and associated hospitalizations and deaths among adults aged 18 years - 18 U.S. Jurisdictions, September 2021-December 2022
Ma KC , Dorabawila V , León TM , Henry H , Johnson AG , Rosenberg E , Mansfield JA , Midgley CM , Plumb ID , Aiken J , Khanani QA , Auche S , Bayoumi NS , Bennett SA , Bernu C , Chang C , Como-Sabetti KJ , Cueto K , Cunningham S , Eddy M , Falender RA , Fleischauer A , Frank DM , Harrington P , Hoskins M , Howsare A , Ingaiza LM , Islam AS , Jensen SA , Jones JM , Kambach G , Kanishka F , Levin Y , Masarik JF 3rd , Meyer SD , Milroy L , Morris KJ , Olmstead J , Olsen NS , Omoike E , Patel K , Pettinger A , Pike MA , Reed IG , Slocum E , Sutton M , Tilakaratne BP , Vest H , Vostok J , Wang JS , Watson-Lewis L , Wienkes HN , Hagen MB , Silk BJ , Scobie HM . MMWR Morb Mortal Wkly Rep 2023 72 (25) 683-689 |
| Predicting β-lactam susceptibility from the genome of Streptococcus pneumoniae and other mitis group streptococci.
Eriksen HB , Fuursted K , Jensen A , Jensen CS , Nielsen X , Christensen JJ , Shewmaker P , Rebelo AR , Aarestrup FM , Schønning K , Slotved HC . Front Microbiol 2023 14 1120023 |
| Norovirus Infection in Young Nicaraguan Children Induces Durable and Genotype-Specific Antibody Immunity.
Brewer-Jensen PD , Reyes Y , Becker-Dreps S , González F , Mallory ML , Gutiérrez L , Zepeda O , Centeno E , Vielot N , Diez-Valcarce M , Vinjé J , Baric R , Lindesmith LC , Bucardo F . Viruses 2022 14 (9) |
| Immune Imprinting Drives Human Norovirus Potential for Global Spread.
Lindesmith LC , Boshier FAT , Brewer-Jensen PD , Roy S , Costantini V , Mallory ML , Zweigart M , May SR , Conrad H , O'Reilly KM , Kelly D , Celma CC , Beard S , Williams R , Tutill HJ , Becker Dreps S , Bucardo F , Allen DJ , Vinjé J , Goldstein RA , Breuer J , Baric RS . mBio 2022 13 (5) e0186122 |
| Evaluation of MALDI Biotyper Mycobacteria Library for Identification of Nontuberculous Mycobacteria.
Toney NC , Zhu W , Jensen B , Gartin J , Anderson K , Lonsway D , Karlsson M , Rasheed JK . J Clin Microbiol 2022 60 (9) e0021722
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| Preexisting Heterotypic Ligand-blocking Antibody Does Not Protect Against Genogroup II Norovirus Episodes in Young Children.
Becker-Dreps S , Brewer-Jensen PD , González F , Reyes Y , Mallory ML , Gutiérrez L , Vielot NA , Diez-Valcarce M , Vinjé J , Baric RS , Lindesmith LC , Bucardo F . J Pediatric Infect Dis Soc 2022 11 (10) 459-462 |
| Protection of mRNA vaccines against hospitalized COVID-19 in adults over the first year following authorization in the United States.
Tenforde MW , Self WH , Zhu Y , Naioti EA , Gaglani M , Ginde AA , Jensen K , Talbot HK , Casey JD , Mohr NM , Zepeski A , McNeal T , Ghamande S , Gibbs KW , Files DC , Hager DN , Shehu A , Prekker ME , Erickson HL , Gong MN , Mohamed A , Johnson NJ , Srinivasan V , Steingrub JS , Peltan ID , Brown SM , Martin ET , Monto AS , Khan A , Hough CL , Busse LW , Ten Lohuis C , Duggal A , Wilson JG , Qadir N , Chang SY , Mallow C , Rivas C , Babcock HM , Kwon JH , Exline MC , Botros MM , Lauring AS , Shapiro NI , Halasa N , Chappell JD , Grijalva CG , Rice TW , Jones ID , Stubblefield WB , Baughman A , Womack KN , Rhoads JP , Lindsell CJ , Hart KW , Turbyfill C , Olson S , Murray N , Adams K , Patel MM . Clin Infect Dis 2022 76 (3) e460-e468 |
| Whole-Genome Sequencing to Identify Missed Rifampicin and Isoniazid Resistance Among Tuberculosis Isolates-Chennai, India, 2013-2016.
Tamilzhalagan S , Shanmugam S , Selvaraj A , Suba S , Suganthi C , Moonan PK , Surie D , Sathyanarayanan MK , Gomathi NS , Jayabal L , Sachdeva KS , Selvaraju S , Swaminathan S , Tripathy SP , Hall PJ , Ranganathan UD . Front Microbiol 2021 12 720436 |
| Identification of Streptococcus pseudopneumoniae and other mitis group streptococci using matrix assisted laser desorption/ionization - time of flight mass spectrometry.
Jensen CS , Dargis R , Shewmaker P , Nielsen XC , Christensen JJ . Diagn Microbiol Infect Dis 2021 101 (3) 115487 |
| Molecular Techniques for Genus and Species Determination of Fungi From Fresh and Paraffin-Embedded Formalin-Fixed Tissue in the Revised EORTC/MSGERC Definitions of Invasive Fungal Infection.
Lockhart SR , Bialek R , Kibbler CC , Cuenca-Estrella M , Jensen HE , Kontoyiannis DP . Clin Infect Dis 2021 72 S109-s113 |
| Streptococcus pseudopneumoniae: Use of Whole-Genome Sequences To Validate Species Identification Methods.
Jensen CS , Iversen KH , Dargis R , Shewmaker P , Rasmussen S , Christensen JJ , Nielsen XC . J Clin Microbiol 2021 59 (2) |
| Preadaptation of pandemic GII.4 noroviruses in unsampled virus reservoirs years before emergence.
Ruis C , Lindesmith LC , Mallory ML , Brewer-Jensen PD , Bryant JM , Costantini V , Monit C , Vinjé J , Baric RS , Goldstein RA , Breuer J . Virus Evol 2020 6 (2) veaa067 |
| Analysis of the reiteration regions (R1 to R5) of varicella-zoster virus.
Jensen NJ , Depledge DP , Ng TFF , Leung J , Quinlivan M , Radford KW , Folster J , Tseng HF , LaRussa P , Jacobsen SJ , Breuer J , Schmid DS . Virology 2020 546 38-50
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| Virus-Host Interactions Between Nonsecretors and Human Norovirus.
Lindesmith LC , Brewer-Jensen PD , Mallory ML , Jensen K , Yount BL , Costantini V , Collins MH , Edwards CE , Sheahan TP , Vinje J , Baric RS . Cell Mol Gastroenterol Hepatol 2020 10 (2) 245-267 |
| Recurrent herpes zoster in the Shingles Prevention Study: Are second episodes caused by the same varicella-zoster virus strain?
Harbecke R , Jensen NJ , Depledge DP , Johnson GR , Ashbaugh ME , Schmid DS , Breuer J , Levin MJ , Oxman MN . Vaccine 2019 38 (2) 150-157
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| Sera Antibody Repertoire Analyses Reveal Mechanisms of Broad and Pandemic Strain Neutralizing Responses after Human Norovirus Vaccination.
Lindesmith LC , McDaniel JR , Changela A , Verardi R , Kerr SA , Costantini V , Brewer-Jensen PD , Mallory ML , Voss WN , Boutz DR , Blazeck JJ , Ippolito GC , Vinje J , Kwong PD , Georgiou G , Baric RS . Immunity 2019 50 (6) 1530-1541.e8 |
| Antigenic characterization of a novel recombinant GII.P16-GII.4 Sydney norovirus strain with minor sequence variation leading to antibody escape.
Lindesmith LC , Brewer-Jensen PD , Mallory ML , Debbink K , Swann EW , Vinje J , Baric RS . J Infect Dis 2017 217 (7) 1145-1152 |
| Revisiting the genotyping scheme for varicella-zoster viruses based on whole-genome comparisons.
Jensen NJ , Rivailler P , Tseng HF , Quinlivan ML , Radford K , Folster J , Harpaz R , LaRussa P , Jacobsen S , Schmid DS . J Gen Virol 2017 98 (6) 1434-1438 |
| Implementation of Objective PASC-Derived Taxon Demarcation Criteria for Official Classification of Filoviruses.
Bao Y , Amarasinghe GK , Basler CF , Bavari S , Bukreyev A , Chandran K , Dolnik O , Dye JM , Ebihara H , Formenty P , Hewson R , Kobinger GP , Leroy EM , Muhlberger E , Netesov SV , Patterson JL , Paweska JT , Smither SJ , Takada A , Towner JS , Volchkov VE , Wahl-Jensen V , Kuhn JH . Viruses 2017 9 (5) |
| Taxonomy of the order Mononegavirales: update 2017.
Amarasinghe GK , Bao Y , Basler CF , Bavari S , Beer M , Bejerman N , Blasdell KR , Bochnowski A , Briese T , Bukreyev A , Calisher CH , Chandran K , Collins PL , Dietzgen RG , Dolnik O , Durrwald R , Dye JM , Easton AJ , Ebihara H , Fang Q , Formenty P , Fouchier RA , Ghedin E , Harding RM , Hewson R , Higgins CM , Hong J , Horie M , James AP , Jiang D , Kobinger GP , Kondo H , Kurath G , Lamb RA , Lee B , Leroy EM , Li M , Maisner A , Muhlberger E , Netesov SV , Nowotny N , Patterson JL , Payne SL , Paweska JT , Pearson MN , Randall RE , Revill PA , Rima BK , Rota P , Rubbenstroth D , Schwemmle M , Smither SJ , Song Q , Stone DM , Takada A , Terregino C , Tesh RB , Tomonaga K , Tordo N , Towner JS , Vasilakis N , Volchkov VE , Wahl-Jensen V , Walker PJ , Wang B , Wang D , Wang F , Wang LF , Werren JH , Whitfield AE , Yan Z , Ye G , Kuhn JH . Arch Virol 2017 162 (8) 2493-2504 |
| Draft Genome Sequence of Mycobacterium wolinskyi, a Rapid-Growing Species of Nontuberculous Mycobacteria.
de Man TJ , Perry KA , Lawsin A , Coulliette AD , Jensen B , Toney NC , Limbago BM , Noble-Wang J . Genome Announc 2016 4 (2) |
| Genomic dissection of travel-associated extended-spectrum-beta-lactamase-producing Salmonella enterica serovar typhi isolates originating from the Philippines: a one-off occurrence or a threat to effective treatment of typhoid fever?
Hendriksen RS , Leekitcharoenphon P , Mikoleit M , Jensen JD , Kaas RS , Roer L , Joshi HB , Pornruangmong S , Pulsrikarn C , Gonzalez-Aviles GD , Reuland EA , Nashwan AN , Wester AL , Aarestrup FM , Hasman H . J Clin Microbiol 2014 53 (2) 677-80 |
| Filovirus RefSeq entries: evaluation and selection of filovirus type variants, type sequences, and names.
Kuhn JH , Andersen KG , Bao Y , Bavari S , Becker S , Bennett RS , Bergman NH , Blinkova O , Bradfute S , Brister JR , Bukreyev A , Chandran K , Chepurnov AA , Davey RA , Dietzgen RG , Doggett NA , Dolnik O , Dye JM , Enterlein S , Fenimore PW , Formenty P , Freiberg AN , Garry RF , Garza NL , Gire SK , Gonzalez JP , Griffiths A , Happi CT , Hensley LE , Herbert AS , Hevey MC , Hoenen T , Honko AN , Ignatyev GM , Jahrling PB , Johnson JC , Johnson KM , Kindrachuk J , Klenk HD , Kobinger G , Kochel TJ , Lackemeyer MG , Leroy EM , Lever MS , Muhlberger E , Netesov SV , Olinger GG , Omilabu SA , Palacios G , Panchal RG , Park DJ , Patterson JL , Paweska JT , Peters CJ , Pettitt J , Pitt L , Radoshitzky SR , Ryabchikova EI , Saphire EO , Sabeti PC , Sealfon R , Smither SJ , Sullivan NJ , Swanepoel R , Takada A , Towner JS , van der Groen G , Volchkov VE , Volchkova VA , Wahl-Jensen V , Warren TK , Warfield KL , Weidmann M , Nichol ST . Viruses 2014 6 (9) 3663-82 |
| Outbreak of Pseudomonas aeruginosa and Klebsiella pneumoniae bloodstream infections at an outpatient chemotherapy center.
Dobbs TE , Guh AY , Oakes P , Vince MJ , Forbi JC , Jensen B , Moulton-Meissner H , Byers P . Am J Infect Control 2014 42 (7) 731-4 |
| Deep sequencing of viral genomes provides insight into the evolution and pathogenesis of varicella zoster virus and its vaccine in humans.
Depledge DP , Kundu S , Jensen NJ , Gray ER , Jones M , Steinberg S , Gershon A , Kinchington PR , Schmid DS , Balloux F , Nichols RA , Breuer J . Mol Biol Evol 2014 31 (2) 397-409 |
| An exogenous retrovirus isolated from koalas with malignant neoplasias in a US zoo
Xu W , Stadler CK , Gorman K , Jensen N , Kim D , Zheng H , Tang S , Switzer WM , Pye GW , Eiden MV . Proc Natl Acad Sci U S A 2013 110 (28) 11547-52 |
| Performance of Cepheid (R) Xpert MTB/RIF (R) and TB-Biochip (R) MDR in two regions of Russia with a high prevalence of drug-resistant tuberculosis
Kurbatova EV , Kaminski DA , Erokhin VV , Volchenkov GV , Andreevskaya SN , Chernousova LN , Demikhova OV , Ershova JV , Kaunetis NV , Kuznetsova TA , Larionova EE , Smirnova TG , Somova TR , Vasilieva IA , Vorobieva AV , Zolkina SS , Cegielski JP . Eur J Clin Microbiol Infect Dis 2013 32 (6) 735-43 |
| Virus nomenclature below the species level: a standardized nomenclature for natural variants of viruses assigned to the family Filoviridae
Kuhn JH , Bao Y , Bavari S , Becker S , Bradfute S , Brister JR , Bukreyev AA , Chandran K , Davey RA , Dolnik O , Dye JM , Enterlein S , Hensley LE , Honko AN , Jahrling PB , Johnson KM , Kobinger G , Leroy EM , Lever MS , Muhlberger E , Netesov SV , Olinger GG , Palacios G , Patterson JL , Paweska JT , Pitt L , Radoshitzky SR , Saphire EO , Smither SJ , Swanepoel R , Towner JS , van der Groen G , Volchkov VE , Wahl-Jensen V , Warren TK , Weidmann M , Nichol ST . Arch Virol 2013 158 (1) 301-11 |
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