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CDC-Authored Genomics and Precision Health Publications Database|Home|PHGKB

CDC-Authored Genomics and Precision Health Publications Database


Last data update: Mar 08, 2021. (Total: 3180 publications since 2011)
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Records 1-30 (of 143 Records)
Query Trace: Hiv or aids [original query]
Trends in Hepatocellular Carcinoma Incidence and Risk Among Persons With HIV in the US and Canada, 1996-2015.
Jing Sun, Keri N Althoff, Yuezhou Jing, Michael A Horberg, Kate Buchacz, M John Gill, Amy C Justice, Charles S Rabkin, James J Goedert, Keith Sigel, Edward Cachay, Lesley Park, Joseph K Lim, H Nina Kim, Vincent Lo Re, Richard Moore, Timothy Sterling, Marion G Peters, Chad J Achenbach, Michael Silverberg, Jennifer E Thorne, Angel M Mayor, Heidi M Crane, Mari M Kitahata, Marina Klein, Gregory D Kirk, and
JAMA network open 2021 4(2) e2037512
Molecular Epidemiological Analysis of the Origin and Transmission Dynamics of the HIV-1 CRF01_AE Sub-Epidemic in Bulgaria.
Ivailo Alexiev, Ellsworth M Campbell, Sergey Knyazev, Yi Pan, Lyubomira Grigorova, Reneta Dimitrova, Aleksandra Partsuneva, Anna Gancheva, Asya Kostadinova, Carole Seguin-Devaux, Ivaylo Elenkov, Nina Yancheva, and William M Switzer
Viruses 2021 Jan 13(1)
Identification of an HIV-1 and Neurosyphilis Cluster in Vermont.
Devika Singh, William M Switzer, Roy Belcher, Daniel Daltry, and Jennifer S Read
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Dec
Do I Have HIV or Not? Lack of RNA Detection and the Case for Sensitive DNA Testing.
Sandra A Springer, Silvina Masciotra, Jeffrey A Johnson, and Sheldon Campbell
Open forum infectious diseases 2020 Nov 7(11) ofaa478
HIV drug resistance profile in South Africa: Findings and implications from the 2017 national HIV household survey.
Sizulu Moyo, Gillian Hunt, Khangelani Zuma, Mpumi Zungu, Edmore Marinda, Musawenkosi Mabaso, Vibha Kana, Monalisa Kalimashe, Johanna Ledwaba, Inbarani Naidoo, Sinovuyo Takatshana, Tebogo Matjokotja, Cheryl Dietrich, Elliot Raizes, Karidia Diallo, Gurpreet Kindra, Linnetie Mugore, and Thomas Rehle
PloS one 2020 15(11) e0241071
Cytomegalovirus and Epstein-Barr virus viremia are associated with HIV DNA levels in the reservoir of Kenyan infants on antiretroviral therapy.
Jennifer A Slyker, Brandon Guthrie, Mark Pankau, Kenneth Tapia, Dalton Wamalwa, Sarah Benki-Nugent, Evelyn Ngugi, Meei-Li Huang, Irene Njuguna, Agnes Langat, Grace John-Stewart, and Dara Lehman
The Journal of infectious diseases 2020 Oct
High levels of HIV drug resistance among adults failing second-line antiretroviral therapy in Namibia.
Michael R Jordan, Ndapewa Hamunime, Leonard Bikinesi, Souleymane Sawadogo, Simon Agolory, Andreas N Shiningavamwe, Taffa Negussie, Christa L Fisher-Walker, Elliot G Raizes, Nicholus Mutenda, Christian J Hunter, Natalie Dean, Kim Steegen, Vibha Kana, Sergio Carmona, Chunfu Yang, Alice M Tang, Neil Parkin, and Steven Y Hong
Medicine 2020 Sep 99(37) e21661
Establishing Best Practices in a Response to an HIV Cluster: An Example from a Surge Response in West Virginia.
Laura Quilter, Christine Agnew-Brune, Dawn Broussard, Melinda Salmon, Heather Bradley, Vicki Hogan, Alison Ridpath, Kenya Burton, Bridget Connard Rose, Nathan Kirk, Pamela Reynolds, Lisa Varella, Michael Granado, Anthony Gerard, Antoine Thompson, Gloria De La Garza, Chang Lee, and Kyle Bernstein
Sexually transmitted diseases 2020 Sep
Human Immunodeficiency Virus (HIV) Outbreak Investigation Among Persons Who Inject Drugs in Massachusetts Enhanced by HIV Sequence Data.
Matthew Tumpney, Betsey John, Nivedha Panneer, R Paul McClung, Ellsworth M Campbell, Kathleen Roosevelt, Alfred DeMaria, Kate Buchacz, William M Switzer, Sheryl Lyss, and Kevin Cranston
The Journal of infectious diseases 2020 Sep 222(Supplement_5) S259-S267
Employing Molecular Phylodynamic Methods to Identify and Forecast HIV Transmission Clusters in Public Health Settings: A Qualitative Study.
Shannan N Rich, Veronica L Richards, Carla N Mavian, William M Switzer, Brittany Rife Magalis, Karalee Poschman, Shana Geary, Steven E Broadway, Spencer B Bennett, Jason Blanton, Thomas Leitner, J Lucas Boatwright, Nichole E Stetten, Robert L Cook, Emma C Spencer, Marco Salemi, and Mattia Prosperi
Viruses 2020 Aug 12(9)
Diversity of the hepatitis C virus NS5B gene during HIV co-infection.
Tshegofatso Ngwaga, Ling Kong, Derrick Lin, Cassandra Schoborg, Lynn E Taylor, Kenneth H Mayer, Robert S Klein, David D Celentano, Jack D Sobel, Denise J Jamieson, Caroline C King, John E Tavis, and Jason T Blackard
PloS one 2020 15(8) e0237162
Geographic distribution of HIV transmission networks in the United States.
Amy R Board, Alexandra M Oster, Ruiguang Song, Zanetta Gant, Laurie Linley, Meg Watson, Tianchi Zhang, and Anne Marie France
Journal of acquired immune deficiency syndromes (1999) 2020 Jul
Differential Association of HIV Funding With HIV Mortality by Race/Ethnicity, United States, 1999-2017.
Benedict I Truman, Ramal Moonesinghe, Yolanda T Brown, Man-Huei Chang, Jonathan H Mermin, and Hazel D Dean
Public health reports (Washington, D.C. : 1974) 135(1_suppl) 149S-157S
Drug resistance mutations among South African children living with HIV on WHO-recommended ART regimens.
Stephanie Hackett, Chloe A Teasdale, Sherri Pals, Anthony Muttiti, Mary Mogashoa, Joy Chang, Clement Zeh, Artur Ramos, Emilia D Rivadeneira, Joshua DeVos, Katrina Sleeman, and Elaine J Abrams
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Jul
Use of Drug-Level Testing and Single-Genome Sequencing to Unravel a Case of HIV Seroconversion on PrEP.
Matthew A Spinelli, Brentton Lowery, Jennifer A Shuford, Jon Spindler, Mary F Kearney, Jenny R McFarlane, Cheryl McDonald, Hideaki Okochi, Nhi Phung, Karen Kuncze, Kathryn Jee, DeeJay Johannessen, Peter L Anderson, Dawn K Smith, Patricia Defechereux, Robert M Grant, and Monica Gandhi
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Jul
Addressing ethical challenges in US-based HIV phylogenetic research.
Liza Dawson, Nanette Benbow, Faith E Fletcher, Seble Kassaye, Amy Killelea, Stephen R Latham, Lisa M Lee, Thomas Leitner, Susan J Little, Sanjay R Mehta, Omar Martinez, Brian Minalga, Art Poon, Stuart Rennie, Jeremy Sugarman, Patricia Sweeney, Lucia V Torian, and Joel O Wertheim
The Journal of infectious diseases 2020 Jun
Distinct cellular immune properties in cerebrospinal fluid are associated with cognition in HIV-infected individuals initiating antiretroviral therapy.
Beret Amundson, Lillin Lai, Mark J Mulligan, Yong Xu, Zidou Zheng, Suprateek Kundu, Jeffrey L Lennox, Drenna Waldrop-Valverde, Donald Franklin, Alison Swaims-Kohlmeier, Scott L Letendre, and Albert M Anderson
Journal of neuroimmunology 2020 Apr 344577246
Molecular Epidemiology of the HIV-1 Subtype B Sub-Epidemic in Bulgaria.
Ivailo Alexiev, Ellsworth M Campbell, Sergey Knyazev, Yi Pan, Lyubomira Grigorova, Reneta Dimitrova, Aleksandra Partsuneva, Anna Gancheva, Asya Kostadinova, Carole Seguin-Devaux, and William M Switzer
Viruses 2020 Apr 12(4)
Incident infection in high-priority HIV molecular transmission clusters in the united states.
Joel O Wertheim, Nivedha Panneer, Anne Marie France, Neeraja Saduvala, and Alexandra M Oster
AIDS (London, England) 2020 Apr
Using an Established Outbreak Response Plan and Molecular Epidemiology Methods in an HIV Transmission Cluster Investigation, Tennessee, January-June 2017.
Lindsey Sizemore, Mary-Margaret Fill, Samantha A Mathieson, Jennifer Black, Meredith Brantley, Kelly Cooper, Joy Garrett, William M Switzer, Philip J Peters, and Carolyn Wester
Public health reports (Washington, D.C. : 1974) 2020 Mar 33354920915445
Investigation of Presumptive HIV Transmission Associated with Hospitalization Using Nucleotide Sequence Analysis - New York, 2017.
Bridget J Anderson, Ernest Clement, Randall Collura, Abigail Gallucci, Emily Westheimer, Sarah Braunstein, Karen Southwick, Eleanor Adams, Emily Lutterloh, Charles Gonzalez, Robert McDonald, Hongwei Jia, William M Switzer, Priti R Patel, M Patricia Joyce, and Alexandra M Oster
MMWR. Morbidity and mortality weekly report 2020 Mar (10) 260-264
High prevalence of integrase mutation L74I in West African HIV-1 subtypes prior to integrase inhibitor treatment.
Kate El Bouzidi, Steven A Kemp, Rawlings P Datir, Fati Murtala-Ibrahim, Ahmad Aliyu, Vivian Kwaghe, Dan Frampton, Sunando Roy, Judith Breuer, Caroline A Sabin, Obinna Ogbanufe, Man E Charurat, David Bonsall, Tanya Golubchik, Christophe Fraser, Patrick Dakum, Nicaise Ndembi, and Ravindra K Gupta
The Journal of antimicrobial chemotherapy 2020 Feb
Phylodynamic Analysis Complements Partner Services by Identifying Acute and Unreported HIV Transmission.
Ellsworth M Campbell, Anne Patala, Anupama Shankar, Jin-Fen Li, Jeffrey A Johnson, Emily Westheimer, Cynthia L Gay, Stephanie E Cohen, William M Switzer, and Philip J Peters
Viruses 2020 Jan (2)
Temporal Changes in HIV Transmission Patterns among Young Men Who Have Sex with Men, United States, 2009-2016.
Nivedha Panneer, Anne Marie France, Y Omar Whiteside, Tianchi Zhang, Joel O Wertheim, and Alexandra M Oster
Journal of acquired immune deficiency syndromes (1999) 2020 Jan
Low levels of HIV-1 drug resistance mutations in patients who achieved viral re-suppression without regimen switch: a retrospective study.
Chika K Onwuamah, Jonathan Okpokwu, Rosemary Audu, Godwin Imade, Seema T Meloni, Azuka Okwuraiwe, Philippe Chebu, Adesola Z Musa, Beth Chaplin, Ibrahim Dalhatu, Oche Agbaji, Jay Samuels, Oliver Ezechi, Mukhtar Ahmed, Georgina Odaibo, David O Olaleye, Prosper Okonkwo, Babatunde Lawal Salako, Elliot Raizes, Chunfu Yang, Phyllis J Kanki, and Emmanuel O Idigbe
BMC microbiology 2020 Jan (1) 17
Evaluation of phylogenetic methods for inferring the direction of HIV transmission: HPTN 052.
Yinfeng Zhang, Chris Wymant, Oliver Laeyendecker, M Kathryn Grabowski, Matthew Hall, Sarah Hudelson, Estelle Piwowar-Manning, Marybeth McCauley, Theresa Gamble, Mina C Hosseinipour, Nagalingeswaran Kumarasamy, James G Hakim, Johnstone Kumwenda, Lisa A Mills, Breno R Santos, Beatriz Grinsztejn, Jose H Pilotto, Suwat Chariyalertsak, Joseph Makhema, Ying Q Chen, Myron S Cohen, Christophe Fraser, and Susan H Eshleman
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Jan
Invasive Nontypeable Haemophilus influenzae Infection Among Adults With HIV in Metropolitan Atlanta, Georgia, 2008-2018.
Lauren F Collins, Fiona P Havers, Amy Tunali, Stephanie Thomas, Julie A Clennon, Zanthia Wiley, Melissa Tobin-D'Angelo, Tonia Parrott, Timothy D Read, Sarah W Satola, Robert A Petit, and Monica M Farley
JAMA 2019 12 (24) 2399-2410
Natural selection favoring more transmissible HIV detected in United States molecular transmission network.
Joel O Wertheim, Alexandra M Oster, William M Switzer, Chenhua Zhang, Nivedha Panneer, Ellsworth Campbell, Neeraja Saduvala, Jeffrey A Johnson, and Walid Heneine
Nature communications 2019 Dec (1) 5788
HIV-1 genetic diversity to estimate time of infection and infer adherence to preexposure prophylaxis.
Olivia D Council, Susan Ruone, Philip A Mock, George Khalil, Amy Martin, Marcel E Curlin, Janet M McNicholl, Walid Heneine, Wanna Leelawiwat, Kachit Choopanya, Suphak Vanichseni, Thitima Cherdtrakulkiat, Rapeepan Anekvorapong, Michael Martin, and José Gerardo García-Lerma
AIDS (London, England) 2019 Dec (15) 2299-2307
Opioid Use Fueling HIV Transmission in an Urban Setting: An Outbreak of HIV Infection Among People Who Inject Drugs-Massachusetts, 2015-2018.
Charles Alpren, Erica L Dawson, Betsey John, Kevin Cranston, Nivedha Panneer, H Dawn Fukuda, Kathleen Roosevelt, R Monina Klevens, Janice Bryant, Philip J Peters, Sheryl B Lyss, William Switzer, Amanda Burrage, Ashley Murray, Christine Agnew-Brune, Tracy Stiles, Paul McClung, Ellsworth M Campbell, Courtney Breen, Liisa M Randall, Sharoda Dasgupta, Shauna Onofrey, Danae Bixler, Kischa Hampton, Jenifer Leaf Jaeger, Katherine K Hsu, William Adih, Barry Callis, Linda R Goldman, Susie P Danner, Hongwei Jia, Matthew Tumpney, Amy Board, Catherine Brown, Alfred DeMaria, and Kate Buchacz
American journal of public health 2019 Nov e1-e8
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